RNA–Protein interactions for RNA: Q0085

ATP6, Transcript of Subunit a of the F0 sector of mitochondrial F1F0 ATP synthase, yeast

Gene ATP6, Length 780 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP6	Q0085	RFT1	P38206	574 aa	Predicted RBP	0.69	□□□□□ -2.3
ATP6	Q0085	DSK2	P48510	373 aa		0.69	□□□□□ -2.3
ATP6	Q0085	MEH1	Q02205	184 aa		0.69	□□□□□ -2.3
ATP6	Q0085	NOP6	Q07623	225 aa	Known RBP	0.69	□□□□□ -2.3
ATP6	Q0085	RRB1	Q04225	511 aa	Known RBP	0.68	□□□□□ -2.3
ATP6	Q0085	YOL075C	Q08234	1294 aa		0.68	□□□□□ -2.3
ATP6	Q0085	RPN8	Q08723	338 aa	Known RBP	0.68	□□□□□ -2.3
ATP6	Q0085	UAF30	Q08747	228 aa		0.68	□□□□□ -2.3
ATP6	Q0085	YHR086W-A	Q3E746	53 aa		0.68	□□□□□ -2.3
ATP6	Q0085	SMF2	P38778	549 aa		0.67	□□□□□ -2.3
ATP6	Q0085	LCB2	P40970	561 aa		0.67	□□□□□ -2.3
ATP6	Q0085	VPS68	Q12016	184 aa		0.67	□□□□□ -2.3
ATP6	Q0085	SCM3	Q12334	223 aa		0.67	□□□□□ -2.3
ATP6	Q0085	SLM1	P40485	686 aa		0.66	□□□□□ -2.3
ATP6	Q0085	MDM1	Q01846	1127 aa		0.66	□□□□□ -2.3
ATP6	Q0085	RDS3	Q06835	107 aa	Predicted RBP	0.66	□□□□□ -2.3
ATP6	Q0085	MHP1	P43638	1398 aa		0.66	□□□□□ -2.3
ATP6	Q0085	INH1	P01097	85 aa		0.65	□□□□□ -2.31
ATP6	Q0085	LYS12	P40495	371 aa	Known RBP	0.65	□□□□□ -2.31
ATP6	Q0085	YNL040W	P53960	456 aa	Predicted RBP	0.65	□□□□□ -2.31
ATP6	Q0085	RMT2	Q03305	412 aa		0.65	□□□□□ -2.31
ATP6	Q0085	TAF10	Q12030	206 aa		0.65	□□□□□ -2.31
ATP6	Q0085	CDC42	P19073	191 aa		0.64	□□□□□ -2.31
ATP6	Q0085	CSE1	P33307	960 aa		0.64	□□□□□ -2.31
ATP6	Q0085	SSU72	P53538	206 aa	Predicted RBP	0.64	□□□□□ -2.31
ATP6	Q0085	DCR2	Q05924	578 aa		0.64	□□□□□ -2.31
ATP6	Q0085	NDL1	Q06568	189 aa		0.64	□□□□□ -2.31
ATP6	Q0085	CDC31	P06704	161 aa	Known RBP	0.63	□□□□□ -2.31
ATP6	Q0085	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
ATP6	Q0085	DSE1	P40077	573 aa		0.63	□□□□□ -2.31
ATP6	Q0085	MIG2	P53035	382 aa		0.63	□□□□□ -2.31
ATP6	Q0085	LST7	P53237	242 aa		0.63	□□□□□ -2.31
ATP6	Q0085	AQR1	P53943	586 aa		0.63	□□□□□ -2.31
ATP6	Q0085	VAM7	P32912	316 aa		0.62	□□□□□ -2.31
ATP6	Q0085	LTV1	P34078	463 aa		0.62	□□□□□ -2.31
ATP6	Q0085	SRP72	P38688	640 aa	Known RBP	0.62	□□□□□ -2.31
ATP6	Q0085	FCY21	P40039	528 aa		0.62	□□□□□ -2.31
ATP6	Q0085	IPK1	Q06667	281 aa		0.62	□□□□□ -2.31
ATP6	Q0085	ISA2	Q12425	185 aa		0.62	□□□□□ -2.31
ATP6	Q0085	YAK1	P14680	807 aa		0.61	□□□□□ -2.31
ATP6	Q0085	DAP2	P18962	818 aa		0.61	□□□□□ -2.31
ATP6	Q0085	CAB3	P36076	571 aa		0.61	□□□□□ -2.31
ATP6	Q0085	LSG1	P53145	640 aa	Known RBP	0.61	□□□□□ -2.31
ATP6	Q0085	TY3A-G	Q12173	290 aa		0.61	□□□□□ -2.31
ATP6	Q0085	TY3A-I	Q99219	290 aa		0.61	□□□□□ -2.31
ATP6	Q0085	PRE7	P23724	241 aa	Known RBP	0.6	□□□□□ -2.31
ATP6	Q0085	DBR1	P24309	405 aa	Known RBP	0.6	□□□□□ -2.31
ATP6	Q0085	RPC53	P25441	422 aa		0.6	□□□□□ -2.31
ATP6	Q0085	EFB1	P32471	206 aa	Known RBP	0.6	□□□□□ -2.31
ATP6	Q0085	ATG7	P38862	630 aa		0.6	□□□□□ -2.31
ATP6	Q0085	SNL1	P40548	159 aa		0.6	□□□□□ -2.31
ATP6	Q0085	EPL1	P43572	832 aa		0.6	□□□□□ -2.31
ATP6	Q0085	SDS23	P53172	527 aa		0.6	□□□□□ -2.31
ATP6	Q0085	TPC1	P53257	314 aa		0.6	□□□□□ -2.31
ATP6	Q0085	YMR166C	Q03829	368 aa		0.6	□□□□□ -2.31
ATP6	Q0085	GPM3	Q12326	303 aa		0.6	□□□□□ -2.31
ATP6	Q0085	TRM10	Q12400	293 aa		0.6	□□□□□ -2.31
ATP6	Q0085	YOL163W	P0CF20	169 aa		0.59	□□□□□ -2.31
ATP6	Q0085	PDX1	P16451	410 aa		0.59	□□□□□ -2.31
ATP6	Q0085	MSK1	P32048	576 aa		0.59	□□□□□ -2.31
ATP6	Q0085	EDC2	P40023	145 aa	Predicted RBP	0.59	□□□□□ -2.31
ATP6	Q0085	AIM33	Q04516	312 aa		0.59	□□□□□ -2.31
ATP6	Q0085	SUE1	Q06524	206 aa		0.59	□□□□□ -2.31
ATP6	Q0085	TIM22	Q12328	207 aa		0.59	□□□□□ -2.31
ATP6	Q0085	YOR012W	Q12351	137 aa		0.59	□□□□□ -2.31
ATP6	Q0085	RPN6	Q12377	434 aa		0.59	□□□□□ -2.31
ATP6	Q0085	CBP2	P03874	630 aa	Predicted RBP	0.58	□□□□□ -2.32
ATP6	Q0085	YKL187C	P34231	750 aa		0.58	□□□□□ -2.32
ATP6	Q0085	LSM4	P40070	187 aa	Known RBP	0.58	□□□□□ -2.32
ATP6	Q0085	PIR5	P46999	287 aa		0.58	□□□□□ -2.32
ATP6	Q0085	RET3	P53600	189 aa		0.58	□□□□□ -2.32
ATP6	Q0085	ACT1	P60010	375 aa	Known RBP	0.58	□□□□□ -2.32
ATP6	Q0085	SMP3	Q04174	516 aa		0.58	□□□□□ -2.32
ATP6	Q0085	CSM3	Q04659	317 aa		0.58	□□□□□ -2.32
ATP6	Q0085	ERP3	Q12403	225 aa		0.58	□□□□□ -2.32
ATP6	Q0085	DCP1	Q12517	231 aa	Predicted RBP	0.58	□□□□□ -2.32
ATP6	Q0085	SRN2	Q99176	213 aa		0.58	□□□□□ -2.32
ATP6	Q0085	SCO1	P23833	295 aa		0.57	□□□□□ -2.32
ATP6	Q0085	RPN12	P32496	274 aa		0.57	□□□□□ -2.32
ATP6	Q0085	MIM1	Q08176	113 aa		0.57	□□□□□ -2.32
ATP6	Q0085	PEX27	Q08580	376 aa		0.57	□□□□□ -2.32
ATP6	Q0085	VPS1	P21576	704 aa	Known RBP	0.56	□□□□□ -2.32
ATP6	Q0085	RRT12	P25381	491 aa		0.56	□□□□□ -2.32
ATP6	Q0085	KTI12	P34253	313 aa	Known RBP	0.56	□□□□□ -2.32
ATP6	Q0085	PMT4	P46971	762 aa		0.56	□□□□□ -2.32
ATP6	Q0085	UFD1	P53044	361 aa		0.56	□□□□□ -2.32
ATP6	Q0085	YPR078C	Q06813	372 aa		0.56	□□□□□ -2.32
ATP6	Q0085	FSH3	Q99369	266 aa		0.56	□□□□□ -2.32
ATP6	Q0085	MRPS5	P33759	307 aa		0.55	□□□□□ -2.32
ATP6	Q0085	MPE1	P35728	441 aa	Known RBP	0.55	□□□□□ -2.32
ATP6	Q0085	GYL1	Q04322	720 aa		0.55	□□□□□ -2.32
ATP6	Q0085	SPH1	Q06160	661 aa		0.55	□□□□□ -2.32
ATP6	Q0085	PRR2	Q12310	699 aa		0.55	□□□□□ -2.32
ATP6	Q0085	RPS16A	P0CX51	143 aa	Known RBP	0.54	□□□□□ -2.32
ATP6	Q0085	RPS16B	P0CX52	143 aa	Known RBP	0.54	□□□□□ -2.32
ATP6	Q0085	ARF2	P19146	181 aa	Known RBP	0.54	□□□□□ -2.32
ATP6	Q0085	PSO2	P30620	661 aa		0.54	□□□□□ -2.32
ATP6	Q0085	MLH1	P38920	769 aa		0.54	□□□□□ -2.32
ATP6	Q0085	LCP5	P40079	357 aa	Predicted RBP	0.54	□□□□□ -2.32
ATP6	Q0085	SRB7	P47822	140 aa		0.54	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 161.1 ms