RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 UGA3P26370 528 aa5.8□□□□□ -1.48
snR54snR54 BRL1P38770 471 aa5.8□□□□□ -1.48
snR54snR54 GAR1P28007 205 aaKnown RBP5.79□□□□□ -1.48
snR54snR54 MET22P32179 357 aa5.79□□□□□ -1.48
snR54snR54 YPR084WQ06821 456 aa5.79□□□□□ -1.48
snR54snR54 YBL036CP38197 257 aa5.78□□□□□ -1.48
snR54snR54 EMW1P42842 904 aaKnown RBP5.77□□□□□ -1.49
snR54snR54 PTK2P47116 818 aaKnown RBP5.77□□□□□ -1.49
snR54snR54 YBL086CP38177 466 aa5.76□□□□□ -1.49
snR54snR54 YDJ1P25491 409 aaKnown RBP5.75□□□□□ -1.49
snR54snR54 BIO2P32451 375 aa5.75□□□□□ -1.49
snR54snR54 CSE4P36012 229 aa5.75□□□□□ -1.49
snR54snR54 NAF1P53919 492 aaKnown RBP5.75□□□□□ -1.49
snR54snR54 YDR444WQ04093 687 aa5.75□□□□□ -1.49
snR54snR54 ENV9Q08651 330 aa5.75□□□□□ -1.49
snR54snR54 SRF1Q12516 437 aa5.75□□□□□ -1.49
snR54snR54 GUT2P32191 649 aa5.73□□□□□ -1.49
snR54snR54 ISF1P32488 338 aa5.73□□□□□ -1.49
snR54snR54 LCB5Q06147 687 aaKnown RBP5.73□□□□□ -1.49
snR54snR54 MKS1P34072 584 aa5.72□□□□□ -1.49
snR54snR54 LEO1P38439 464 aa5.72□□□□□ -1.49
snR54snR54 MCM16Q12262 181 aa5.72□□□□□ -1.49
snR54snR54 EMP47P43555 445 aa5.71□□□□□ -1.5
snR54snR54 STE20Q03497 939 aaKnown RBP5.71□□□□□ -1.5
snR54snR54 DFG5Q05031 458 aa5.71□□□□□ -1.5
snR54snR54 FRA1Q07825 749 aa5.71□□□□□ -1.5
snR54snR54 GBP2P25555 427 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
snR54snR54 SPT5P27692 1063 aaKnown RBP5.7□□□□□ -1.5
snR54snR54 AAD14P42884 376 aa5.7□□□□□ -1.5
snR54snR54 YNL108CP53929 270 aa5.7□□□□□ -1.5
snR54snR54 RTT106P40161 455 aa5.69□□□□□ -1.5
snR54snR54 YJL007CP47080 104 aa5.69□□□□□ -1.5
snR54snR54 OPT2Q06593 877 aa5.69□□□□□ -1.5
snR54snR54 FBP26P32604 452 aa5.68□□□□□ -1.5
snR54snR54 DLD1P32891 587 aa5.68□□□□□ -1.5
snR54snR54 RGA1P39083 1007 aa5.68□□□□□ -1.5
snR54snR54 NUP85P46673 744 aa5.68□□□□□ -1.5
snR54snR54 ATG20Q07528 640 aa5.68□□□□□ -1.5
snR54snR54 ENO2P00925 437 aaKnown RBP5.67□□□□□ -1.5
snR54snR54 ARG82P07250 355 aa5.67□□□□□ -1.5
snR54snR54 YPL062WQ02781 134 aa5.67□□□□□ -1.5
snR54snR54 SUP45P12385 437 aaKnown RBP5.65□□□□□ -1.5
snR54snR54 APL6P46682 809 aa5.65□□□□□ -1.5
snR54snR54 BDS1Q08347 646 aa5.65□□□□□ -1.5
snR54snR54 YDL176WQ12027 708 aa5.65□□□□□ -1.5
snR54snR54 STE6P12866 1290 aa5.64□□□□□ -1.51
snR54snR54 BIM1P40013 344 aa5.64□□□□□ -1.51
snR54snR54 ATG32P40458 529 aa5.64□□□□□ -1.51
snR54snR54 YJR098CP47139 656 aa5.64□□□□□ -1.51
snR54snR54 ISU1Q03020 165 aa5.64□□□□□ -1.51
snR54snR54 ISR1Q06098 443 aaKnown RBP5.64□□□□□ -1.51
snR54snR54 HAL5P38970 855 aaKnown RBP5.63□□□□□ -1.51
snR54snR54 LSC2P53312 427 aa5.63□□□□□ -1.51
snR54snR54 CAF120P53836 1060 aa5.63□□□□□ -1.51
snR54snR54 YLR346CQ06139 101 aa5.63□□□□□ -1.51
snR54snR54 MIP1P15801 1254 aa5.62□□□□□ -1.51
snR54snR54 GLY1P37303 387 aaKnown RBP5.62□□□□□ -1.51
snR54snR54 MRX12P47084 519 aa5.62□□□□□ -1.51
snR54snR54 RIM21P48565 533 aa5.62□□□□□ -1.51
snR54snR54 SOH1P38633 127 aa5.61□□□□□ -1.51
snR54snR54 SCW11P53189 542 aa5.61□□□□□ -1.51
snR54snR54 TY1A-BLQ12266 440 aa5.61□□□□□ -1.51
snR54snR54 TCB1Q12466 1186 aa5.61□□□□□ -1.51
snR54snR54 TIF1P10081 395 aaKnown RBP5.6□□□□□ -1.51
snR54snR54 YPP1P46951 817 aa5.6□□□□□ -1.51
snR54snR54 HGH1P48362 394 aaKnown RBP5.6□□□□□ -1.51
snR54snR54 DMA2P53924 522 aa5.6□□□□□ -1.51
snR54snR54 RDS2P19541 446 aaKnown RBP5.59□□□□□ -1.51
snR54snR54 ACO2P39533 789 aa5.58□□□□□ -1.52
snR54snR54 YIR007WP40566 764 aa5.58□□□□□ -1.52
snR54snR54 UBP2Q01476 1272 aa5.58□□□□□ -1.52
snR54snR54 ENO1P00924 437 aaKnown RBP5.57□□□□□ -1.52
snR54snR54 RTG2P32608 588 aaKnown RBP5.57□□□□□ -1.52
snR54snR54 UTR2P32623 467 aa5.57□□□□□ -1.52
snR54snR54 WTM2Q12206 467 aa5.57□□□□□ -1.52
snR54snR54 DAT1P13483 248 aaKnown RBP5.56□□□□□ -1.52
snR54snR54 DLD3P39976 496 aaKnown RBP5.56□□□□□ -1.52
snR54snR54 RPL34BP40525 121 aaKnown RBP5.56□□□□□ -1.52
snR54snR54 MRX10Q05648 414 aa5.56□□□□□ -1.52
snR54snR54 SPT2P06843 333 aaPredicted RBP5.55□□□□□ -1.52
snR54snR54 ATG3P40344 310 aa5.55□□□□□ -1.52
snR54snR54 HDA3Q06623 655 aa5.55□□□□□ -1.52
snR54snR54 OSH7P38755 437 aa5.54□□□□□ -1.52
snR54snR54 UTP7P40055 554 aaKnown RBP5.54□□□□□ -1.52
snR54snR54 UTP13Q05946 817 aaKnown RBP5.54□□□□□ -1.52
snR54snR54 YPR204WQ08995 1032 aa5.54□□□□□ -1.52
snR54snR54 RPP2BP02400 110 aaKnown RBP5.53□□□□□ -1.52
snR54snR54 CBC2Q08920 208 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
snR54snR54 ROG3P43602 733 aa5.52□□□□□ -1.53
snR54snR54 CDC19P00549 500 aaKnown RBP5.51□□□□□ -1.53
snR54snR54 SLX8P40072 274 aa5.51□□□□□ -1.53
snR54snR54 RGA2Q06407 1009 aa5.51□□□□□ -1.53
snR54snR54 TBS1P38114 1094 aa5.5□□□□□ -1.53
snR54snR54 SSN3P39073 555 aa5.5□□□□□ -1.53
snR54snR54 VTC4P47075 721 aa5.5□□□□□ -1.53
snR54snR54 NAM8Q00539 523 aaKnown RBP5.5□□□□□ -1.53
snR54snR54 TY1A-MR1Q04215 440 aa5.5□□□□□ -1.53
snR54snR54 CCP1P00431 361 aa5.49□□□□□ -1.53
snR54snR54 DAL1P32375 460 aa5.49□□□□□ -1.53
snR54snR54 AIM9P40053 627 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 519.5 ms