RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C NAF1P53919 492 aaKnown RBP5.45□□□□□ -1.54
HRD1YOL013C MRT4P33201 236 aaKnown RBP5.44□□□□□ -1.54
HRD1YOL013C RTT106P40161 455 aa5.44□□□□□ -1.54
HRD1YOL013C TEC1P18412 486 aa5.43□□□□□ -1.54
HRD1YOL013C MSB3P48566 633 aaPredicted RBP5.43□□□□□ -1.54
HRD1YOL013C PKC1P24583 1151 aa5.42□□□□□ -1.54
HRD1YOL013C UGA3P26370 528 aa5.42□□□□□ -1.54
HRD1YOL013C SPT5P27692 1063 aaKnown RBP5.42□□□□□ -1.54
HRD1YOL013C GUT2P32191 649 aa5.41□□□□□ -1.54
HRD1YOL013C EMW1P42842 904 aaKnown RBP5.4□□□□□ -1.54
HRD1YOL013C YJR115WP47152 169 aa5.4□□□□□ -1.54
HRD1YOL013C APP1P53933 587 aa5.39□□□□□ -1.55
HRD1YOL013C STE20Q03497 939 aaKnown RBP5.39□□□□□ -1.55
HRD1YOL013C ITT1Q04638 464 aa5.39□□□□□ -1.55
HRD1YOL013C YPR084WQ06821 456 aa5.39□□□□□ -1.55
HRD1YOL013C SRF1Q12516 437 aa5.39□□□□□ -1.55
HRD1YOL013C YBL086CP38177 466 aa5.37□□□□□ -1.55
HRD1YOL013C FRA1Q07825 749 aa5.37□□□□□ -1.55
HRD1YOL013C MRX12P47084 519 aa5.37□□□□□ -1.55
HRD1YOL013C PTK2P47116 818 aaKnown RBP5.37□□□□□ -1.55
HRD1YOL013C YDJ1P25491 409 aaKnown RBP5.36□□□□□ -1.55
HRD1YOL013C YJL007CP47080 104 aa5.36□□□□□ -1.55
HRD1YOL013C MCM16Q12262 181 aa5.36□□□□□ -1.55
HRD1YOL013C MET22P32179 357 aa5.35□□□□□ -1.55
HRD1YOL013C MKS1P34072 584 aa5.35□□□□□ -1.55
HRD1YOL013C YPP1P46951 817 aa5.35□□□□□ -1.55
HRD1YOL013C ENV9Q08651 330 aa5.35□□□□□ -1.55
HRD1YOL013C BIO2P32451 375 aa5.34□□□□□ -1.55
HRD1YOL013C EMP47P43555 445 aa5.34□□□□□ -1.55
HRD1YOL013C ARG82P07250 355 aa5.34□□□□□ -1.56
HRD1YOL013C SUP45P12385 437 aaKnown RBP5.34□□□□□ -1.56
HRD1YOL013C GAR1P28007 205 aaKnown RBP5.34□□□□□ -1.56
HRD1YOL013C YNL108CP53929 270 aa5.34□□□□□ -1.56
HRD1YOL013C YDR444WQ04093 687 aa5.34□□□□□ -1.56
HRD1YOL013C NUP85P46673 744 aa5.33□□□□□ -1.56
HRD1YOL013C YLR346CQ06139 101 aa5.33□□□□□ -1.56
HRD1YOL013C ATG20Q07528 640 aa5.33□□□□□ -1.56
HRD1YOL013C GBP2P25555 427 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
HRD1YOL013C ISF1P32488 338 aa5.32□□□□□ -1.56
HRD1YOL013C FBP26P32604 452 aa5.32□□□□□ -1.56
HRD1YOL013C LCB5Q06147 687 aaKnown RBP5.32□□□□□ -1.56
HRD1YOL013C BIM1P40013 344 aa5.31□□□□□ -1.56
HRD1YOL013C ATG3P40344 310 aa5.31□□□□□ -1.56
HRD1YOL013C DFG5Q05031 458 aa5.31□□□□□ -1.56
HRD1YOL013C BDS1Q08347 646 aa5.31□□□□□ -1.56
HRD1YOL013C RPL34BP40525 121 aaKnown RBP5.31□□□□□ -1.56
HRD1YOL013C AAD14P42884 376 aa5.31□□□□□ -1.56
HRD1YOL013C ENO2P00925 437 aaKnown RBP5.3□□□□□ -1.56
HRD1YOL013C RPP2BP02400 110 aaKnown RBP5.3□□□□□ -1.56
HRD1YOL013C STE6P12866 1290 aa5.3□□□□□ -1.56
HRD1YOL013C ISU1Q03020 165 aa5.3□□□□□ -1.56
HRD1YOL013C RGA2Q06407 1009 aa5.3□□□□□ -1.56
HRD1YOL013C ATG32P40458 529 aa5.29□□□□□ -1.56
HRD1YOL013C APL6P46682 809 aa5.29□□□□□ -1.56
HRD1YOL013C RLF2Q12495 606 aa5.29□□□□□ -1.56
HRD1YOL013C LSC2P53312 427 aa5.28□□□□□ -1.56
HRD1YOL013C OPT2Q06593 877 aa5.28□□□□□ -1.56
HRD1YOL013C TIF1P10081 395 aaKnown RBP5.28□□□□□ -1.56
HRD1YOL013C UTP13Q05946 817 aaKnown RBP5.28□□□□□ -1.56
HRD1YOL013C ISR1Q06098 443 aaKnown RBP5.28□□□□□ -1.56
HRD1YOL013C RIM21P48565 533 aa5.27□□□□□ -1.57
HRD1YOL013C MIP1P15801 1254 aa5.26□□□□□ -1.57
HRD1YOL013C RTG2P32608 588 aaKnown RBP5.26□□□□□ -1.57
HRD1YOL013C GLY1P37303 387 aaKnown RBP5.26□□□□□ -1.57
HRD1YOL013C UBP2Q01476 1272 aa5.26□□□□□ -1.57
HRD1YOL013C DLD1P32891 587 aa5.25□□□□□ -1.57
HRD1YOL013C SOH1P38633 127 aa5.25□□□□□ -1.57
HRD1YOL013C DLD3P39976 496 aaKnown RBP5.24□□□□□ -1.57
HRD1YOL013C YJR098CP47139 656 aa5.24□□□□□ -1.57
HRD1YOL013C SCW11P53189 542 aa5.24□□□□□ -1.57
HRD1YOL013C SPT2P06843 333 aaPredicted RBP5.24□□□□□ -1.57
HRD1YOL013C MRX10Q05648 414 aa5.24□□□□□ -1.57
HRD1YOL013C DAT1P13483 248 aaKnown RBP5.23□□□□□ -1.57
HRD1YOL013C YPL062WQ02781 134 aa5.23□□□□□ -1.57
HRD1YOL013C ENO1P00924 437 aaKnown RBP5.22□□□□□ -1.57
HRD1YOL013C UTR2P32623 467 aa5.22□□□□□ -1.57
HRD1YOL013C TBS1P38114 1094 aa5.22□□□□□ -1.57
HRD1YOL013C HAL5P38970 855 aaKnown RBP5.22□□□□□ -1.57
HRD1YOL013C TCB1Q12466 1186 aa5.22□□□□□ -1.57
HRD1YOL013C WTM2Q12206 467 aa5.21□□□□□ -1.57
HRD1YOL013C RDS2P19541 446 aaKnown RBP5.21□□□□□ -1.58
HRD1YOL013C ACO2P39533 789 aa5.21□□□□□ -1.58
HRD1YOL013C HDA3Q06623 655 aa5.21□□□□□ -1.58
HRD1YOL013C YPR204WQ08995 1032 aa5.21□□□□□ -1.58
HRD1YOL013C TY1A-BLQ12266 440 aa5.21□□□□□ -1.58
HRD1YOL013C RGA1P39083 1007 aa5.2□□□□□ -1.58
HRD1YOL013C CAF120P53836 1060 aa5.19□□□□□ -1.58
HRD1YOL013C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
HRD1YOL013C YDL176WQ12027 708 aa5.19□□□□□ -1.58
HRD1YOL013C OSH7P38755 437 aa5.18□□□□□ -1.58
HRD1YOL013C VTC4P47075 721 aa5.18□□□□□ -1.58
HRD1YOL013C SIS2P36024 562 aa5.18□□□□□ -1.58
HRD1YOL013C YFL034WP43564 1073 aa5.18□□□□□ -1.58
HRD1YOL013C DAL1P32375 460 aa5.17□□□□□ -1.58
HRD1YOL013C PEP12P32854 288 aa5.16□□□□□ -1.58
HRD1YOL013C AIM9P40053 627 aaKnown RBP5.16□□□□□ -1.58
HRD1YOL013C SLX8P40072 274 aa5.16□□□□□ -1.58
HRD1YOL013C MSN5P52918 1224 aa5.16□□□□□ -1.58
HRD1YOL013C YIR007WP40566 764 aa5.15□□□□□ -1.58
HRD1YOL013C UTP7P40055 554 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms