RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W RTT106P40161 455 aa9.12□□□□□ -0.95
CSI1YMR025W RAD59Q12223 238 aa9.12□□□□□ -0.95
CSI1YMR025W OPT2Q06593 877 aa9.11□□□□□ -0.95
CSI1YMR025W KIN1P13185 1064 aa9.09□□□□□ -0.95
CSI1YMR025W FIG4P42837 879 aa9.09□□□□□ -0.95
CSI1YMR025W NUP85P46673 744 aa9.09□□□□□ -0.95
CSI1YMR025W APP1P53933 587 aa9.09□□□□□ -0.95
CSI1YMR025W LEU3P08638 886 aa9.08□□□□□ -0.96
CSI1YMR025W YBL086CP38177 466 aa9.08□□□□□ -0.96
CSI1YMR025W YLR346CQ06139 101 aa9.08□□□□□ -0.96
CSI1YMR025W EMW1P42842 904 aaKnown RBP9.06□□□□□ -0.96
CSI1YMR025W CAF120P53836 1060 aa9.05□□□□□ -0.96
CSI1YMR025W SSA2P10592 639 aaKnown RBP9.04□□□□□ -0.96
CSI1YMR025W ARG82P07250 355 aa9.03□□□□□ -0.96
CSI1YMR025W ACO2P39533 789 aa9.03□□□□□ -0.96
CSI1YMR025W AAD14P42884 376 aa9.03□□□□□ -0.96
CSI1YMR025W GLY1P37303 387 aaKnown RBP9.02□□□□□ -0.97
CSI1YMR025W MIP1P15801 1254 aa9□□□□□ -0.97
CSI1YMR025W TEC1P18412 486 aa9□□□□□ -0.97
CSI1YMR025W SCW11P53189 542 aa8.98□□□□□ -0.97
CSI1YMR025W LSC2P53312 427 aa8.98□□□□□ -0.97
CSI1YMR025W YPR084WQ06821 456 aa8.98□□□□□ -0.97
CSI1YMR025W MAK16P10962 306 aaPredicted RBP8.97□□□□□ -0.97
CSI1YMR025W MKS1P34072 584 aa8.97□□□□□ -0.97
CSI1YMR025W RPN1P38764 993 aaKnown RBP8.97□□□□□ -0.97
CSI1YMR025W TY1A-BLQ12266 440 aa8.97□□□□□ -0.97
CSI1YMR025W DLD1P32891 587 aa8.96□□□□□ -0.98
CSI1YMR025W GUA1P38625 525 aaKnown RBP8.95□□□□□ -0.98
CSI1YMR025W DFG5Q05031 458 aa8.95□□□□□ -0.98
CSI1YMR025W YIR007WP40566 764 aa8.94□□□□□ -0.98
CSI1YMR025W YJR098CP47139 656 aa8.94□□□□□ -0.98
CSI1YMR025W UBP2Q01476 1272 aa8.93□□□□□ -0.98
CSI1YMR025W GUT2P32191 649 aa8.91□□□□□ -0.98
CSI1YMR025W TCB1Q12466 1186 aa8.91□□□□□ -0.98
CSI1YMR025W FBP26P32604 452 aa8.89□□□□□ -0.99
CSI1YMR025W NAF1P53919 492 aaKnown RBP8.89□□□□□ -0.99
CSI1YMR025W BDS1Q08347 646 aa8.89□□□□□ -0.99
CSI1YMR025W STE6P12866 1290 aa8.86□□□□□ -0.99
CSI1YMR025W YGR035CP53222 116 aa8.85□□□□□ -0.99
CSI1YMR025W STE20Q03497 939 aaKnown RBP8.85□□□□□ -0.99
CSI1YMR025W FRA1Q07825 749 aa8.85□□□□□ -0.99
CSI1YMR025W CSE4P36012 229 aa8.84□□□□□ -0.99
CSI1YMR025W ATG20Q07528 640 aa8.84□□□□□ -0.99
CSI1YMR025W HPC2Q01448 625 aa8.83□□□□□ -1
CSI1YMR025W HPF1Q05164 967 aa8.83□□□□□ -1
CSI1YMR025W OSH7P38755 437 aa8.82□□□□□ -1
CSI1YMR025W ROG3P43602 733 aa8.81□□□□□ -1
CSI1YMR025W ISU1Q03020 165 aa8.81□□□□□ -1
CSI1YMR025W TRK2P28584 889 aa8.8□□□□□ -1
CSI1YMR025W YBL036CP38197 257 aa8.8□□□□□ -1
CSI1YMR025W TY1A-MR1Q04215 440 aa8.79□□□□□ -1
CSI1YMR025W ISF1P32488 338 aa8.77□□□□□ -1.01
CSI1YMR025W BRL1P38770 471 aa8.77□□□□□ -1.01
CSI1YMR025W EMP47P43555 445 aa8.77□□□□□ -1.01
CSI1YMR025W TFB3Q03290 321 aa8.77□□□□□ -1.01
CSI1YMR025W SPT5P27692 1063 aaKnown RBP8.76□□□□□ -1.01
CSI1YMR025W MCM16Q12262 181 aa8.76□□□□□ -1.01
CSI1YMR025W CCP1P00431 361 aa8.75□□□□□ -1.01
CSI1YMR025W YDJ1P25491 409 aaKnown RBP8.75□□□□□ -1.01
CSI1YMR025W PKC1P24583 1151 aa8.74□□□□□ -1.01
CSI1YMR025W MRX12P47084 519 aa8.74□□□□□ -1.01
CSI1YMR025W CDC19P00549 500 aaKnown RBP8.73□□□□□ -1.01
CSI1YMR025W DLD3P39976 496 aaKnown RBP8.72□□□□□ -1.01
CSI1YMR025W APL6P46682 809 aa8.72□□□□□ -1.01
CSI1YMR025W VTC4P47075 721 aa8.72□□□□□ -1.01
CSI1YMR025W ISR1Q06098 443 aaKnown RBP8.72□□□□□ -1.01
CSI1YMR025W RPP2BP02400 110 aaKnown RBP8.71□□□□□ -1.02
CSI1YMR025W NAM8Q00539 523 aaKnown RBP8.71□□□□□ -1.02
CSI1YMR025W BIO2P32451 375 aa8.68□□□□□ -1.02
CSI1YMR025W DAL1P32375 460 aa8.67□□□□□ -1.02
CSI1YMR025W WTM2Q12206 467 aa8.67□□□□□ -1.02
CSI1YMR025W DPH6Q12429 685 aa8.66□□□□□ -1.02
CSI1YMR025W SPT2P06843 333 aaPredicted RBP8.65□□□□□ -1.02
CSI1YMR025W DAT1P13483 248 aaKnown RBP8.65□□□□□ -1.02
CSI1YMR025W UTR2P32623 467 aa8.65□□□□□ -1.02
CSI1YMR025W HAL5P38970 855 aaKnown RBP8.65□□□□□ -1.02
CSI1YMR025W LYS5P50113 272 aa8.64□□□□□ -1.03
CSI1YMR025W YPR204WQ08995 1032 aa8.63□□□□□ -1.03
CSI1YMR025W YNL108CP53929 270 aa8.62□□□□□ -1.03
CSI1YMR025W SUP45P12385 437 aaKnown RBP8.61□□□□□ -1.03
CSI1YMR025W SOH1P38633 127 aa8.61□□□□□ -1.03
CSI1YMR025W SSN3P39073 555 aa8.61□□□□□ -1.03
CSI1YMR025W YPP1P46951 817 aa8.61□□□□□ -1.03
CSI1YMR025W ENO2P00925 437 aaKnown RBP8.6□□□□□ -1.03
CSI1YMR025W JJJ3P47138 172 aa8.6□□□□□ -1.03
CSI1YMR025W MSN5P52918 1224 aa8.6□□□□□ -1.03
CSI1YMR025W CUZ1P53899 274 aa8.6□□□□□ -1.03
CSI1YMR025W TBS1P38114 1094 aa8.59□□□□□ -1.03
CSI1YMR025W MTC5Q03897 1148 aa8.59□□□□□ -1.03
CSI1YMR025W UTP13Q05946 817 aaKnown RBP8.59□□□□□ -1.03
CSI1YMR025W SLA1P32790 1244 aa8.58□□□□□ -1.04
CSI1YMR025W ATG3P40344 310 aa8.58□□□□□ -1.04
CSI1YMR025W TY1A-DR3Q12441 440 aa8.58□□□□□ -1.04
CSI1YMR025W UTP7P40055 554 aaKnown RBP8.57□□□□□ -1.04
CSI1YMR025W UBP15P50101 1230 aa8.57□□□□□ -1.04
CSI1YMR025W HDA3Q06623 655 aa8.56□□□□□ -1.04
CSI1YMR025W YJL007CP47080 104 aa8.55□□□□□ -1.04
CSI1YMR025W SLX8P40072 274 aa8.54□□□□□ -1.04
CSI1YMR025W RIM21P48565 533 aa8.54□□□□□ -1.04
CSI1YMR025W AHP1P38013 176 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms