RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C HIM1Q06674 414 aa14.56□□□□□ -0.08
BDF1YLR399C NOP53Q12080 455 aaKnown RBP14.56□□□□□ -0.08
BDF1YLR399C BRN1P38170 754 aa14.55□□□□□ -0.08
BDF1YLR399C VPS20Q04272 221 aa14.55□□□□□ -0.08
BDF1YLR399C GCR2Q01722 534 aa14.54□□□□□ -0.08
BDF1YLR399C CWC22P53333 577 aaKnown RBP14.53□□□□□ -0.08
BDF1YLR399C TYS1P36421 394 aaKnown RBP14.53□□□□□ -0.08
BDF1YLR399C CAB1Q04430 367 aa14.53□□□□□ -0.08
BDF1YLR399C RNA1P11745 407 aaKnown RBP14.52□□□□□ -0.09
BDF1YLR399C TCD1P38756 429 aa14.52□□□□□ -0.09
BDF1YLR399C HST1P53685 503 aa14.52□□□□□ -0.09
BDF1YLR399C DNF3Q12674 1656 aa14.52□□□□□ -0.09
BDF1YLR399C CLB5P30283 435 aa14.51□□□□□ -0.09
BDF1YLR399C RFC1P38630 861 aaKnown RBP14.51□□□□□ -0.09
BDF1YLR399C LTV1P34078 463 aa14.51□□□□□ -0.09
BDF1YLR399C KRE33P53914 1056 aaKnown RBP14.51□□□□□ -0.09
BDF1YLR399C HXT13P39924 564 aa14.5□□□□□ -0.09
BDF1YLR399C HRQ1Q05549 1077 aa14.5□□□□□ -0.09
BDF1YLR399C RSM25P40496 264 aa14.48□□□□□ -0.09
BDF1YLR399C CIN4P39110 191 aa14.48□□□□□ -0.09
BDF1YLR399C APC11Q12157 165 aa14.48□□□□□ -0.09
BDF1YLR399C CYC8P14922 966 aa14.47□□□□□ -0.09
BDF1YLR399C HXT17P53631 564 aa14.46□□□□□ -0.09
BDF1YLR399C SFI1Q12369 946 aa14.46□□□□□ -0.09
BDF1YLR399C BIK1P11709 440 aa14.46□□□□□ -0.09
BDF1YLR399C STU2P46675 888 aa14.46□□□□□ -0.09
BDF1YLR399C TAP42Q04372 366 aa14.46□□□□□ -0.09
BDF1YLR399C DID4P36108 232 aa14.45□□□□□ -0.1
BDF1YLR399C KEX1P09620 729 aa14.45□□□□□ -0.1
BDF1YLR399C SPO1P53541 631 aa14.44□□□□□ -0.1
BDF1YLR399C FPR4Q06205 392 aaPredicted RBP14.44□□□□□ -0.1
BDF1YLR399C SPB4P25808 606 aaPredicted RBP14.43□□□□□ -0.1
BDF1YLR399C MFT1P33441 392 aaKnown RBP14.43□□□□□ -0.1
BDF1YLR399C CWH41P53008 833 aa14.43□□□□□ -0.1
BDF1YLR399C NMD2P38798 1089 aaKnown RBP14.43□□□□□ -0.1
BDF1YLR399C YNG2P38806 282 aaKnown RBP14.43□□□□□ -0.1
BDF1YLR399C TIM50Q02776 476 aa14.43□□□□□ -0.1
BDF1YLR399C VPS60Q03390 229 aa14.43□□□□□ -0.1
BDF1YLR399C PDI1P17967 522 aaKnown RBP14.42□□□□□ -0.1
BDF1YLR399C AUS1Q08409 1394 aa14.42□□□□□ -0.1
BDF1YLR399C RNR2P09938 399 aaKnown RBP14.41□□□□□ -0.1
BDF1YLR399C MRPL10P36520 322 aa14.41□□□□□ -0.1
BDF1YLR399C UTP13Q05946 817 aaKnown RBP14.41□□□□□ -0.1
BDF1YLR399C NOP14Q99207 810 aaKnown RBP14.4□□□□□ -0.1
BDF1YLR399C PBY1P38254 753 aa14.4□□□□□ -0.1
BDF1YLR399C KRI1P42846 591 aaKnown RBP14.4□□□□□ -0.1
BDF1YLR399C SSL2Q00578 843 aa14.39□□□□□ -0.11
BDF1YLR399C IPL1P38991 367 aa14.38□□□□□ -0.11
BDF1YLR399C NUG1P40010 520 aaKnown RBP14.38□□□□□ -0.11
BDF1YLR399C HYR1P40581 163 aaKnown RBP14.38□□□□□ -0.11
BDF1YLR399C CSI1Q04368 295 aa14.38□□□□□ -0.11
BDF1YLR399C TRL1P09880 827 aaKnown RBP14.37□□□□□ -0.11
BDF1YLR399C CLB1P24868 471 aa14.37□□□□□ -0.11
BDF1YLR399C MNR2P35724 969 aa14.37□□□□□ -0.11
BDF1YLR399C DEP1P31385 405 aa14.37□□□□□ -0.11
BDF1YLR399C SWE1P32944 819 aa14.37□□□□□ -0.11
BDF1YLR399C CEP3P40969 608 aa14.36□□□□□ -0.11
BDF1YLR399C RPS0BP46654 252 aaKnown RBP14.36□□□□□ -0.11
BDF1YLR399C RIX1P38883 763 aaPredicted RBP14.35□□□□□ -0.11
BDF1YLR399C ENV11P53246 860 aa14.35□□□□□ -0.11
BDF1YLR399C RCM1P53972 490 aa14.35□□□□□ -0.11
BDF1YLR399C MPE1P35728 441 aaKnown RBP14.35□□□□□ -0.11
BDF1YLR399C LYS2P07702 1392 aa14.35□□□□□ -0.11
BDF1YLR399C PPH3P32345 308 aa14.34□□□□□ -0.11
BDF1YLR399C MRX12P47084 519 aa14.34□□□□□ -0.11
BDF1YLR399C GYP7P48365 746 aa14.34□□□□□ -0.11
BDF1YLR399C SRT1Q03175 343 aa14.33□□□□□ -0.12
BDF1YLR399C SES1P07284 462 aaKnown RBP14.32□□□□□ -0.12
BDF1YLR399C DSN1P40568 576 aa14.32□□□□□ -0.12
BDF1YLR399C VAS1P07806 1104 aaKnown RBP14.32□□□□□ -0.12
BDF1YLR399C GRX4P32642 244 aa14.32□□□□□ -0.12
BDF1YLR399C MED8P38304 223 aa14.32□□□□□ -0.12
BDF1YLR399C DSD1P53095 428 aa14.32□□□□□ -0.12
BDF1YLR399C PEX19Q07418 342 aa14.32□□□□□ -0.12
BDF1YLR399C YBR287WP38355 427 aa14.3□□□□□ -0.12
BDF1YLR399C ECM1P39715 212 aa14.3□□□□□ -0.12
BDF1YLR399C RTF1P53064 558 aa14.3□□□□□ -0.12
BDF1YLR399C BUB1P41695 1021 aaKnown RBP RIP-Chip data14.29□□□□□ -0.12not detected
BDF1YLR399C USO1P25386 1790 aa14.27□□□□□ -0.12
BDF1YLR399C SPC110P32380 944 aa14.27□□□□□ -0.12
BDF1YLR399C RNT1Q02555 471 aa14.27□□□□□ -0.13
BDF1YLR399C LEU2P04173 364 aaPredicted RBP14.26□□□□□ -0.13
BDF1YLR399C CDC16P09798 840 aa14.26□□□□□ -0.13
BDF1YLR399C CCT5P40413 562 aaKnown RBP14.26□□□□□ -0.13
BDF1YLR399C TRS33Q99394 268 aa14.26□□□□□ -0.13
BDF1YLR399C TAF13P11747 167 aa14.25□□□□□ -0.13
BDF1YLR399C RPS19AP07280 144 aaKnown RBP14.24□□□□□ -0.13
BDF1YLR399C RPS19BP07281 144 aaPredicted RBP14.24□□□□□ -0.13
BDF1YLR399C AKL1P38080 1108 aaKnown RBP14.24□□□□□ -0.13
BDF1YLR399C NPR3P38742 1146 aa14.24□□□□□ -0.13
BDF1YLR399C ZDS1P50111 915 aaKnown RBP14.24□□□□□ -0.13
BDF1YLR399C GAS4Q08271 471 aa14.24□□□□□ -0.13
BDF1YLR399C BMS1Q08965 1183 aaKnown RBP14.24□□□□□ -0.13
BDF1YLR399C RPO41P13433 1351 aaKnown RBP14.24□□□□□ -0.13
BDF1YLR399C FRS2P15625 503 aaKnown RBP14.24□□□□□ -0.13
BDF1YLR399C YGL140CP53120 1219 aa14.24□□□□□ -0.13
BDF1YLR399C MSB4Q12317 492 aa14.24□□□□□ -0.13
BDF1YLR399C MBR1P23493 339 aa14.23□□□□□ -0.13
BDF1YLR399C PRP31P49704 494 aaPredicted RBP14.23□□□□□ -0.13
BDF1YLR399C ATE1P16639 503 aa14.22□□□□□ -0.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms