RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W AAD16Q02895 342 aa7.66□□□□□ -1.18
SSP120YLR250W RIX7Q07844 837 aaKnown RBP7.66□□□□□ -1.18
SSP120YLR250W MSN5P52918 1224 aa7.65□□□□□ -1.18
SSP120YLR250W RAD4P14736 754 aa7.64□□□□□ -1.19
SSP120YLR250W HPC2Q01448 625 aa7.64□□□□□ -1.19
SSP120YLR250W TUM1Q08686 304 aaKnown RBP7.64□□□□□ -1.19
SSP120YLR250W SEC3P33332 1336 aaKnown RBP7.63□□□□□ -1.19
SSP120YLR250W SAP155P43612 1002 aa7.63□□□□□ -1.19
SSP120YLR250W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
SSP120YLR250W KIN4Q01919 800 aa7.62□□□□□ -1.19
SSP120YLR250W GRX1P25373 110 aaKnown RBP7.61□□□□□ -1.19
SSP120YLR250W UTP22P53254 1237 aaPredicted RBP7.61□□□□□ -1.19
SSP120YLR250W SQS1P53866 767 aaKnown RBP7.61□□□□□ -1.19
SSP120YLR250W TAP42Q04372 366 aa7.61□□□□□ -1.19
SSP120YLR250W MHP1P43638 1398 aa7.6□□□□□ -1.19
SSP120YLR250W YER156CP40093 338 aaKnown RBP7.6□□□□□ -1.19
SSP120YLR250W CWH41P53008 833 aa7.6□□□□□ -1.19
SSP120YLR250W YBP2P53169 641 aa7.6□□□□□ -1.19
SSP120YLR250W NUP145P49687 1317 aa7.59□□□□□ -1.19
SSP120YLR250W CTT1P06115 562 aa7.59□□□□□ -1.19
SSP120YLR250W GRX4P32642 244 aa7.59□□□□□ -1.19
SSP120YLR250W CTI6Q08923 506 aa7.59□□□□□ -1.19
SSP120YLR250W SSA4P22202 642 aaKnown RBP7.57□□□□□ -1.2
SSP120YLR250W ERT1P38140 529 aa7.57□□□□□ -1.2
SSP120YLR250W HSP104P31539 908 aaKnown RBP7.56□□□□□ -1.2
SSP120YLR250W NYV1Q12255 253 aa7.56□□□□□ -1.2
SSP120YLR250W BUD27P43573 796 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
SSP120YLR250W DSD1P53095 428 aa7.55□□□□□ -1.2
SSP120YLR250W KAR2P16474 682 aaKnown RBP7.54□□□□□ -1.2
SSP120YLR250W SCT1P32784 759 aa7.54□□□□□ -1.2
SSP120YLR250W YKL222CP35995 705 aa7.54□□□□□ -1.2
SSP120YLR250W AVT3P36062 692 aa7.54□□□□□ -1.2
SSP120YLR250W RRT14P40470 206 aa7.53□□□□□ -1.2
SSP120YLR250W SMY1P32364 656 aaKnown RBP7.52□□□□□ -1.21
SSP120YLR250W TEA1P47988 759 aa7.52□□□□□ -1.21
SSP120YLR250W NST1P53935 1240 aa7.52□□□□□ -1.21
SSP120YLR250W PDS5Q04264 1277 aa7.52□□□□□ -1.21
SSP120YLR250W PUS5Q06244 254 aa7.52□□□□□ -1.21
SSP120YLR250W TOP1P04786 769 aa7.51□□□□□ -1.21
SSP120YLR250W PMD1P32634 1753 aa7.51□□□□□ -1.21
SSP120YLR250W UTP10P42945 1769 aaKnown RBP7.51□□□□□ -1.21
SSP120YLR250W TRK1P12685 1235 aa7.5□□□□□ -1.21
SSP120YLR250W CAF20P12962 161 aaKnown RBP7.5□□□□□ -1.21
SSP120YLR250W AKL1P38080 1108 aaKnown RBP7.5□□□□□ -1.21
SSP120YLR250W PAP2P53632 584 aaKnown RBP7.5□□□□□ -1.21
SSP120YLR250W ALE1Q08548 619 aa7.5□□□□□ -1.21
SSP120YLR250W RMT2Q03305 412 aa7.49□□□□□ -1.21
SSP120YLR250W SER1P33330 395 aaKnown RBP7.48□□□□□ -1.21
SSP120YLR250W SLI15P38283 698 aa7.48□□□□□ -1.21
SSP120YLR250W PEX21P50091 288 aa7.48□□□□□ -1.21
SSP120YLR250W NOP53Q12080 455 aaKnown RBP7.48□□□□□ -1.21
SSP120YLR250W ICL1P28240 557 aaPredicted RBP7.47□□□□□ -1.21
SSP120YLR250W PFF1P38244 976 aa7.47□□□□□ -1.21
SSP120YLR250W YGL082WP53155 381 aa7.47□□□□□ -1.21
SSP120YLR250W LPD1P09624 499 aaKnown RBP7.46□□□□□ -1.22
SSP120YLR250W CTF4Q01454 927 aa7.46□□□□□ -1.22
SSP120YLR250W THS1P04801 734 aaKnown RBP7.45□□□□□ -1.22
SSP120YLR250W FPK1P53739 893 aa7.45□□□□□ -1.22
SSP120YLR250W AOS1Q06624 347 aa7.45□□□□□ -1.22
SSP120YLR250W FAS2P19097 1887 aaKnown RBP7.45□□□□□ -1.22
SSP120YLR250W NTH2P35172 780 aa7.44□□□□□ -1.22
SSP120YLR250W DCD1P06773 312 aa7.43□□□□□ -1.22
SSP120YLR250W KCC4P25389 1037 aa7.43□□□□□ -1.22
SSP120YLR250W YFR016CP43597 1233 aaKnown RBP7.43□□□□□ -1.22
SSP120YLR250W BDF2Q07442 638 aa7.43□□□□□ -1.22
SSP120YLR250W ATG20Q07528 640 aa7.43□□□□□ -1.22
SSP120YLR250W PHM7Q12252 991 aa7.43□□□□□ -1.22
SSP120YLR250W RET1P22276 1149 aaKnown RBP7.42□□□□□ -1.22
SSP120YLR250W RRP46P53256 223 aaPredicted RBP7.42□□□□□ -1.22
SSP120YLR250W ERO1Q03103 563 aa7.42□□□□□ -1.22
SSP120YLR250W IRC3Q06683 689 aa7.42□□□□□ -1.22
SSP120YLR250W ARG8P18544 423 aa7.41□□□□□ -1.22
SSP120YLR250W GAP1P19145 602 aaPredicted RBP7.41□□□□□ -1.22
SSP120YLR250W RAT1Q02792 1006 aaKnown RBP7.41□□□□□ -1.22
SSP120YLR250W YLR278CQ05854 1341 aa7.41□□□□□ -1.22
SSP120YLR250W APL2P36000 726 aaPredicted RBP7.4□□□□□ -1.22
SSP120YLR250W YKU70P32807 602 aa7.39□□□□□ -1.23
SSP120YLR250W SHC1P39000 512 aa7.39□□□□□ -1.23
SSP120YLR250W MDG1P53885 366 aa7.38□□□□□ -1.23
SSP120YLR250W POL5P39985 1022 aaKnown RBP7.37□□□□□ -1.23
SSP120YLR250W ZDS2P54786 942 aa7.37□□□□□ -1.23
SSP120YLR250W UBP16Q02863 499 aa7.37□□□□□ -1.23
SSP120YLR250W SSP2Q08646 371 aa7.37□□□□□ -1.23
SSP120YLR250W SIT4P20604 311 aa7.36□□□□□ -1.23
SSP120YLR250W RTG2P32608 588 aaKnown RBP7.36□□□□□ -1.23
SSP120YLR250W FRD1P32614 470 aaKnown RBP7.36□□□□□ -1.23
SSP120YLR250W VHR2P40041 505 aa7.36□□□□□ -1.23
SSP120YLR250W DUS1P53759 423 aaKnown RBP7.36□□□□□ -1.23
SSP120YLR250W YPR204WQ08995 1032 aa7.36□□□□□ -1.23
SSP120YLR250W FIG2P25653 1609 aa7.35□□□□□ -1.23
SSP120YLR250W ETP1P38748 585 aaKnown RBP7.35□□□□□ -1.23
SSP120YLR250W RPN1P38764 993 aaKnown RBP7.35□□□□□ -1.23
SSP120YLR250W VPS64Q03944 604 aa7.35□□□□□ -1.23
SSP120YLR250W TSR3Q12094 313 aaKnown RBP7.35□□□□□ -1.23
SSP120YLR250W UGA3P26370 528 aa7.34□□□□□ -1.23
SSP120YLR250W FET4P40988 552 aa7.34□□□□□ -1.23
SSP120YLR250W GRX6Q12438 231 aa7.34□□□□□ -1.23
SSP120YLR250W YBR287WP38355 427 aa7.33□□□□□ -1.24
SSP120YLR250W SET4P42948 560 aa7.33□□□□□ -1.24
SSP120YLR250W DIB1Q06819 143 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms