RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	SUB1	P54000	292 aa	Known RBP	6.15	□□□□□ -1.42
RRN3	YKL125W	VPS30	Q02948	557 aa		6.15	□□□□□ -1.42
RRN3	YKL125W	TFB3	Q03290	321 aa		6.15	□□□□□ -1.42
RRN3	YKL125W	RVB2	Q12464	471 aa	Known RBP	6.15	□□□□□ -1.42
RRN3	YKL125W	MCM2	P29469	868 aa		6.15	□□□□□ -1.43
RRN3	YKL125W	GUT1	P32190	709 aa		6.15	□□□□□ -1.43
RRN3	YKL125W	SEC9	P40357	651 aa		6.15	□□□□□ -1.43
RRN3	YKL125W	PXR1	P53335	271 aa	Predicted RBP	6.15	□□□□□ -1.43
RRN3	YKL125W	PIB1	Q06651	286 aa		6.15	□□□□□ -1.43
RRN3	YKL125W	GRE2	Q12068	342 aa	Known RBP	6.15	□□□□□ -1.43
RRN3	YKL125W	RAD3	P06839	778 aa		6.14	□□□□□ -1.43
RRN3	YKL125W	AIM20	P40451	204 aa		6.14	□□□□□ -1.43
RRN3	YKL125W	LCD1	Q04377	747 aa		6.14	□□□□□ -1.43
RRN3	YKL125W	SML1	Q04964	104 aa		6.14	□□□□□ -1.43
RRN3	YKL125W	SLP1	Q12232	587 aa		6.14	□□□□□ -1.43
RRN3	YKL125W	PAN1	P32521	1480 aa		6.14	□□□□□ -1.43
RRN3	YKL125W	GIN4	Q12263	1142 aa		6.13	□□□□□ -1.43
RRN3	YKL125W	SEC39	Q12745	709 aa		6.13	□□□□□ -1.43
RRN3	YKL125W	PHO87	P25360	923 aa		6.13	□□□□□ -1.43
RRN3	YKL125W	CDC11	P32458	415 aa		6.13	□□□□□ -1.43
RRN3	YKL125W	YNL050C	P53952	270 aa		6.13	□□□□□ -1.43
RRN3	YKL125W	NDL1	Q06568	189 aa		6.13	□□□□□ -1.43
RRN3	YKL125W	PUS1	Q12211	544 aa	Known RBP	6.13	□□□□□ -1.43
RRN3	YKL125W	RAD9	P14737	1309 aa		6.12	□□□□□ -1.43
RRN3	YKL125W	BPT1	P14772	1559 aa		6.12	□□□□□ -1.43
RRN3	YKL125W	GEA1	P47102	1408 aa	Predicted RBP	6.12	□□□□□ -1.43
RRN3	YKL125W	KIC1	P38692	1080 aa		6.12	□□□□□ -1.43
RRN3	YKL125W	BRL1	P38770	471 aa		6.12	□□□□□ -1.43
RRN3	YKL125W	YGR273C	P53329	174 aa		6.12	□□□□□ -1.43
RRN3	YKL125W	YNL035C	P53962	389 aa	Known RBP	6.12	□□□□□ -1.43
RRN3	YKL125W	CDC45	Q08032	650 aa		6.12	□□□□□ -1.43
RRN3	YKL125W	MDM38	Q08179	573 aa		6.12	□□□□□ -1.43
RRN3	YKL125W	ZUO1	P32527	433 aa	Known RBP	6.11	□□□□□ -1.43
RRN3	YKL125W	MPP10	P47083	593 aa	Known RBP	6.11	□□□□□ -1.43
RRN3	YKL125W	MRS2	Q01926	470 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	ESC2	Q06340	456 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	GCN2	P15442	1659 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	PSO2	P30620	661 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	TGL3	P40308	642 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	APL6	P46682	809 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	PDS5	Q04264	1277 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	GGA1	Q06336	557 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	YOR389W	Q08912	624 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	SAM3	Q08986	587 aa		6.11	□□□□□ -1.43
RRN3	YKL125W	NUP157	P40064	1391 aa	Known RBP	6.1	□□□□□ -1.43
RRN3	YKL125W	RAD54	P32863	898 aa		6.1	□□□□□ -1.43
RRN3	YKL125W	YMR124W	P39523	943 aa	Known RBP	6.1	□□□□□ -1.43
RRN3	YKL125W	SIT1	P39980	628 aa		6.1	□□□□□ -1.43
RRN3	YKL125W	KAR3	P17119	729 aa		6.09	□□□□□ -1.43
RRN3	YKL125W	CLN1	P20437	546 aa		6.09	□□□□□ -1.43
RRN3	YKL125W	SIS1	P25294	352 aa	Known RBP	6.09	□□□□□ -1.43
RRN3	YKL125W	RTT107	P38850	1070 aa		6.09	□□□□□ -1.43
RRN3	YKL125W	IAH1	P41734	238 aa		6.09	□□□□□ -1.43
RRN3	YKL125W	PEX19	Q07418	342 aa		6.09	□□□□□ -1.43
RRN3	YKL125W	SFI1	Q12369	946 aa		6.09	□□□□□ -1.43
RRN3	YKL125W	KEX1	P09620	729 aa		6.09	□□□□□ -1.44
RRN3	YKL125W	MSH1	P25846	959 aa		6.09	□□□□□ -1.44
RRN3	YKL125W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.44	not detected
RRN3	YKL125W	OLA1	P38219	394 aa	Known RBP	6.09	□□□□□ -1.44
RRN3	YKL125W	RKM3	P38222	552 aa		6.09	□□□□□ -1.44
RRN3	YKL125W	DNM1	P54861	757 aa		6.09	□□□□□ -1.44
RRN3	YKL125W	HSL1	P34244	1518 aa		6.08	□□□□□ -1.44
RRN3	YKL125W	RAD16	P31244	790 aa		6.08	□□□□□ -1.44
RRN3	YKL125W	DPH5	P32469	300 aa	Predicted RBP	6.08	□□□□□ -1.44
RRN3	YKL125W	TPS3	P38426	1054 aa	Known RBP	6.08	□□□□□ -1.44
RRN3	YKL125W	TFG1	P41895	735 aa	Predicted RBP	6.08	□□□□□ -1.44
RRN3	YKL125W	CSN12	P47130	423 aa		6.08	□□□□□ -1.44
RRN3	YKL125W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
RRN3	YKL125W	TY4B-P	A0A0B7P3V8	1104 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	PKC1	P24583	1151 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	SOL3	P38858	249 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	CEP3	P40969	608 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	STU2	P46675	888 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	ORC1	P54784	914 aa	Predicted RBP	6.07	□□□□□ -1.44
RRN3	YKL125W	HAP5	Q02516	242 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	CFT2	Q12102	859 aa	Predicted RBP	6.07	□□□□□ -1.44
RRN3	YKL125W	TSC11	P40061	1430 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	NUP145	P49687	1317 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	KEX2	P13134	814 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	VPS41	P38959	992 aa		6.07	□□□□□ -1.44
RRN3	YKL125W	RPP0	P05317	312 aa	Known RBP	6.06	□□□□□ -1.44
RRN3	YKL125W	PIM1	P36775	1133 aa		6.06	□□□□□ -1.44
RRN3	YKL125W	GDT1	P38301	280 aa	Predicted RBP	6.06	□□□□□ -1.44
RRN3	YKL125W	ORC6	P38826	435 aa		6.06	□□□□□ -1.44
RRN3	YKL125W	YCF1	P39109	1515 aa	Known RBP	6.05	□□□□□ -1.44
RRN3	YKL125W	NUP159	P40477	1460 aa		6.05	□□□□□ -1.44
RRN3	YKL125W	NDC80	P40460	691 aa		6.05	□□□□□ -1.44
RRN3	YKL125W	ARR1	Q06596	294 aa		6.05	□□□□□ -1.44
RRN3	YKL125W	PSR1	Q07800	427 aa		6.05	□□□□□ -1.44
RRN3	YKL125W	GYP5	Q12344	894 aa		6.05	□□□□□ -1.44
RRN3	YKL125W	NUF2	P33895	451 aa		6.05	□□□□□ -1.44
RRN3	YKL125W	ISW1	P38144	1129 aa		6.05	□□□□□ -1.44
RRN3	YKL125W	MTR4	P47047	1073 aa	Known RBP	6.05	□□□□□ -1.44
RRN3	YKL125W	ARP5	P53946	755 aa		6.05	□□□□□ -1.44
RRN3	YKL125W	LAM1	P38851	1228 aa		6.04	□□□□□ -1.44
RRN3	YKL125W	HOS4	P40480	1083 aa		6.04	□□□□□ -1.44
RRN3	YKL125W	MPH1	P40562	993 aa		6.04	□□□□□ -1.44
RRN3	YKL125W	YMR196W	Q04336	1088 aa		6.04	□□□□□ -1.44
RRN3	YKL125W	VPS5	Q92331	675 aa		6.04	□□□□□ -1.44
RRN3	YKL125W	POL1	P13382	1468 aa		6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms