RNA–Protein interactions for RNA: YJR045C

SSC1, Transcript of Hsp70 family ATPase, yeastyeast

Gene SSC1, Length 1,965 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSC1YJR045C TAP42Q04372 366 aa9.04□□□□□ -0.96
SSC1YJR045C TCB2P48231 1178 aa9.03□□□□□ -0.96
SSC1YJR045C ADE16P54113 591 aaKnown RBP9.03□□□□□ -0.96
SSC1YJR045C GRX4P32642 244 aa9.03□□□□□ -0.96
SSC1YJR045C HIM1Q06674 414 aa9.02□□□□□ -0.97
SSC1YJR045C PDS5Q04264 1277 aa9□□□□□ -0.97
SSC1YJR045C RPO41P13433 1351 aaKnown RBP9□□□□□ -0.97
SSC1YJR045C MNN4P36044 1178 aa8.99□□□□□ -0.97
SSC1YJR045C PRS1P32895 427 aaKnown RBP8.99□□□□□ -0.97
SSC1YJR045C CLC1P17891 233 aa8.97□□□□□ -0.97
SSC1YJR045C ATG13Q06628 738 aa8.97□□□□□ -0.97
SSC1YJR045C KAR2P16474 682 aaKnown RBP8.95□□□□□ -0.98
SSC1YJR045C BDF1P35817 686 aa8.95□□□□□ -0.98
SSC1YJR045C INP54Q08227 384 aaKnown RBP8.95□□□□□ -0.98
SSC1YJR045C YFR016CP43597 1233 aaKnown RBP8.95□□□□□ -0.98
SSC1YJR045C MSB4Q12317 492 aa8.95□□□□□ -0.98
SSC1YJR045C IME2P32581 645 aa8.93□□□□□ -0.98
SSC1YJR045C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
SSC1YJR045C OSM1P21375 501 aaKnown RBP8.92□□□□□ -0.98
SSC1YJR045C ALD3P54114 506 aa8.92□□□□□ -0.98
SSC1YJR045C SSA1P10591 642 aaKnown RBP8.92□□□□□ -0.98
SSC1YJR045C BUG1Q12191 341 aa8.91□□□□□ -0.98
SSC1YJR045C RAD4P14736 754 aa8.9□□□□□ -0.99
SSC1YJR045C GRX1P25373 110 aaKnown RBP8.9□□□□□ -0.99
SSC1YJR045C DSD1P53095 428 aa8.9□□□□□ -0.99
SSC1YJR045C NST1P53935 1240 aa8.9□□□□□ -0.99
SSC1YJR045C GRE2Q12068 342 aaKnown RBP8.9□□□□□ -0.99
SSC1YJR045C NUP145P49687 1317 aa8.9□□□□□ -0.99
SSC1YJR045C HSP104P31539 908 aaKnown RBP8.89□□□□□ -0.99
SSC1YJR045C PAP2P53632 584 aaKnown RBP8.88□□□□□ -0.99
SSC1YJR045C TRK1P12685 1235 aa8.88□□□□□ -0.99
SSC1YJR045C YBP2P53169 641 aa8.88□□□□□ -0.99
SSC1YJR045C AIM44Q99299 758 aa8.86□□□□□ -0.99
SSC1YJR045C AKL1P38080 1108 aaKnown RBP8.86□□□□□ -0.99
SSC1YJR045C TOS1P38288 455 aa8.85□□□□□ -0.99
SSC1YJR045C UTP22P53254 1237 aaPredicted RBP8.85□□□□□ -0.99
SSC1YJR045C CTF4Q01454 927 aa8.85□□□□□ -0.99
SSC1YJR045C UTP10P42945 1769 aaKnown RBP8.85□□□□□ -0.99
SSC1YJR045C TUM1Q08686 304 aaKnown RBP8.84□□□□□ -0.99
SSC1YJR045C EAF6P47128 113 aa8.83□□□□□ -1
SSC1YJR045C HPC2Q01448 625 aa8.82□□□□□ -1
SSC1YJR045C RPS0BP46654 252 aaKnown RBP8.82□□□□□ -1
SSC1YJR045C SAP155P43612 1002 aa8.81□□□□□ -1
SSC1YJR045C AOS1Q06624 347 aa8.81□□□□□ -1
SSC1YJR045C RIX7Q07844 837 aaKnown RBP8.81□□□□□ -1
SSC1YJR045C OPY1P38271 328 aa8.8□□□□□ -1
SSC1YJR045C MSN5P52918 1224 aa8.8□□□□□ -1
SSC1YJR045C EAF7P53911 425 aaKnown RBP8.8□□□□□ -1
SSC1YJR045C RMT2Q03305 412 aa8.8□□□□□ -1
SSC1YJR045C CWC22P53333 577 aaKnown RBP8.79□□□□□ -1
SSC1YJR045C KCC4P25389 1037 aa8.79□□□□□ -1
SSC1YJR045C NTH2P35172 780 aa8.79□□□□□ -1
SSC1YJR045C PSD2P53037 1138 aaKnown RBP8.79□□□□□ -1
SSC1YJR045C RRP46P53256 223 aaPredicted RBP8.78□□□□□ -1
SSC1YJR045C ALE1Q08548 619 aa8.78□□□□□ -1
SSC1YJR045C NYV1Q12255 253 aa8.77□□□□□ -1
SSC1YJR045C BUD27P43573 796 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
SSC1YJR045C TEA1P47988 759 aa8.76□□□□□ -1.01
SSC1YJR045C QCR6P00127 147 aa8.75□□□□□ -1.01
SSC1YJR045C RPC31P17890 251 aa8.75□□□□□ -1.01
SSC1YJR045C NOP53Q12080 455 aaKnown RBP8.75□□□□□ -1.01
SSC1YJR045C CTI6Q08923 506 aa8.75□□□□□ -1.01
SSC1YJR045C TSR3Q12094 313 aaKnown RBP8.75□□□□□ -1.01
SSC1YJR045C CTT1P06115 562 aa8.74□□□□□ -1.01
SSC1YJR045C FPR3P38911 411 aaKnown RBP8.74□□□□□ -1.01
SSC1YJR045C YER156CP40093 338 aaKnown RBP8.74□□□□□ -1.01
SSC1YJR045C RRT14P40470 206 aa8.74□□□□□ -1.01
SSC1YJR045C MDG1P53885 366 aa8.73□□□□□ -1.01
SSC1YJR045C ERT1P38140 529 aa8.73□□□□□ -1.01
SSC1YJR045C YKL222CP35995 705 aa8.72□□□□□ -1.01
SSC1YJR045C YCK3P39962 524 aa8.72□□□□□ -1.01
SSC1YJR045C UGA3P26370 528 aa8.72□□□□□ -1.01
SSC1YJR045C SER1P33330 395 aaKnown RBP8.72□□□□□ -1.01
SSC1YJR045C CWH41P53008 833 aa8.72□□□□□ -1.01
SSC1YJR045C KIN4Q01919 800 aa8.72□□□□□ -1.01
SSC1YJR045C PHM7Q12252 991 aa8.72□□□□□ -1.01
SSC1YJR045C PMD1P32634 1753 aa8.71□□□□□ -1.02
SSC1YJR045C RTR1P40084 226 aaPredicted RBP8.7□□□□□ -1.02
SSC1YJR045C YNL050CP53952 270 aa8.7□□□□□ -1.02
SSC1YJR045C LPD1P09624 499 aaKnown RBP8.7□□□□□ -1.02
SSC1YJR045C YGL082WP53155 381 aa8.7□□□□□ -1.02
SSC1YJR045C YGR130CP53278 816 aa8.7□□□□□ -1.02
SSC1YJR045C SNF7P39929 240 aaKnown RBP8.69□□□□□ -1.02
SSC1YJR045C SSP2Q08646 371 aa8.69□□□□□ -1.02
SSC1YJR045C NSE3Q05541 303 aa8.68□□□□□ -1.02
SSC1YJR045C PRD1P25375 712 aa8.68□□□□□ -1.02
SSC1YJR045C PFF1P38244 976 aa8.68□□□□□ -1.02
SSC1YJR045C SQS1P53866 767 aaKnown RBP8.68□□□□□ -1.02
SSC1YJR045C LYS2P07702 1392 aa8.67□□□□□ -1.02
SSC1YJR045C SMY1P32364 656 aaKnown RBP8.67□□□□□ -1.02
SSC1YJR045C RAT1Q02792 1006 aaKnown RBP8.67□□□□□ -1.02
SSC1YJR045C ARG8P18544 423 aa8.66□□□□□ -1.02
SSC1YJR045C SPT21P35209 758 aa8.65□□□□□ -1.02
SSC1YJR045C FUN12P39730 1002 aaKnown RBP8.65□□□□□ -1.02
SSC1YJR045C IOC4Q04213 475 aa8.64□□□□□ -1.03
SSC1YJR045C BDF2Q07442 638 aa8.64□□□□□ -1.03
SSC1YJR045C APL2P36000 726 aaPredicted RBP8.64□□□□□ -1.03
SSC1YJR045C ZDS1P50111 915 aaKnown RBP8.64□□□□□ -1.03
SSC1YJR045C DCD1P06773 312 aa8.63□□□□□ -1.03
SSC1YJR045C ERO1Q03103 563 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 73 ms