RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C PRP45P28004 379 aaPredicted RBP5.37□□□□□ -1.55
PAN1YIR006C DEP1P31385 405 aa5.37□□□□□ -1.55
PAN1YIR006C SPT8P38915 602 aa5.37□□□□□ -1.55
PAN1YIR006C RTT109Q07794 436 aa5.37□□□□□ -1.55
PAN1YIR006C GDB1Q06625 1536 aa5.37□□□□□ -1.55
PAN1YIR006C YIL092WP40497 633 aa5.37□□□□□ -1.55
PAN1YIR006C FYV8P46949 817 aaKnown RBP5.37□□□□□ -1.55
PAN1YIR006C CBF5P33322 483 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
PAN1YIR006C MEC3Q02574 474 aa5.36□□□□□ -1.55
PAN1YIR006C TAF13P11747 167 aa5.36□□□□□ -1.55
PAN1YIR006C TFG2P41896 400 aaPredicted RBP5.36□□□□□ -1.55
PAN1YIR006C TY3B-IQ7LHG5 1498 aaKnown RBP5.36□□□□□ -1.55
PAN1YIR006C TAP42Q04372 366 aa5.36□□□□□ -1.55
PAN1YIR006C HIM1Q06674 414 aa5.36□□□□□ -1.55
PAN1YIR006C MRP7P12687 371 aa5.35□□□□□ -1.55
PAN1YIR006C SIP3P38717 1229 aa5.35□□□□□ -1.55
PAN1YIR006C RAD9P14737 1309 aa5.35□□□□□ -1.55
PAN1YIR006C SLN1P39928 1220 aaPredicted RBP5.35□□□□□ -1.55
PAN1YIR006C YKE2P52553 114 aa5.35□□□□□ -1.55
PAN1YIR006C YBP2P53169 641 aa5.35□□□□□ -1.55
PAN1YIR006C SEN54Q02825 467 aaPredicted RBP5.35□□□□□ -1.55
PAN1YIR006C MSH3P25336 1018 aa5.35□□□□□ -1.55
PAN1YIR006C RRM3P38766 723 aa5.35□□□□□ -1.55
PAN1YIR006C RBA50Q04418 439 aa5.35□□□□□ -1.55
PAN1YIR006C APC11Q12157 165 aa5.35□□□□□ -1.55
PAN1YIR006C PET123P17558 318 aa5.34□□□□□ -1.55
PAN1YIR006C CSI1Q04368 295 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-HO13535 1793 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-DR5P0C2I2 1755 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-DR6P0C2I3 1755 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-LR2P0C2I5 1755 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-LR3P0C2I6 1755 aaKnown RBP5.34□□□□□ -1.55
PAN1YIR006C TY1B-PR1P0C2I9 1755 aaKnown RBP5.34□□□□□ -1.55
PAN1YIR006C TY1B-PR2P0C2J0 1756 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-PR3P0C2J1 1755 aaKnown RBP5.34□□□□□ -1.55
PAN1YIR006C TY1B-JR1P47098 1755 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-ML2Q03434 1755 aaKnown RBP5.34□□□□□ -1.55
PAN1YIR006C TY1B-ER1Q03612 1755 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-ML1Q04711 1755 aaKnown RBP5.34□□□□□ -1.55
PAN1YIR006C TY1B-GR2Q12269 1755 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-OLQ12273 1755 aa5.34□□□□□ -1.55
PAN1YIR006C TY1B-PLQ12414 1755 aaKnown RBP5.34□□□□□ -1.55
PAN1YIR006C HCA4P20448 770 aaKnown RBP5.34□□□□□ -1.55
PAN1YIR006C IMH1Q06704 911 aaKnown RBP5.34□□□□□ -1.55
PAN1YIR006C YOL098CQ12496 1037 aa5.34□□□□□ -1.55
PAN1YIR006C KRE5P22023 1365 aa5.34□□□□□ -1.55
PAN1YIR006C UGA3P26370 528 aa5.34□□□□□ -1.55
PAN1YIR006C TSR3Q12094 313 aaKnown RBP5.33□□□□□ -1.56
PAN1YIR006C KEX1P09620 729 aa5.33□□□□□ -1.56
PAN1YIR006C THI22Q06490 572 aa5.33□□□□□ -1.56
PAN1YIR006C BRE1Q07457 700 aaKnown RBP5.33□□□□□ -1.56
PAN1YIR006C LSP1Q12230 341 aaKnown RBP5.33□□□□□ -1.56
PAN1YIR006C BTN2P53286 410 aa5.33□□□□□ -1.56
PAN1YIR006C HOS3Q02959 697 aaKnown RBP5.33□□□□□ -1.56
PAN1YIR006C ARO1P08566 1588 aaKnown RBP5.33□□□□□ -1.56
PAN1YIR006C EDE1P34216 1381 aa5.32□□□□□ -1.56
PAN1YIR006C RAD4P14736 754 aa5.32□□□□□ -1.56
PAN1YIR006C KCC4P25389 1037 aa5.32□□□□□ -1.56
PAN1YIR006C SQT1P35184 431 aa5.32□□□□□ -1.56
PAN1YIR006C SSF1P38789 453 aaPredicted RBP5.32□□□□□ -1.56
PAN1YIR006C MLC1P53141 149 aa5.32□□□□□ -1.56
PAN1YIR006C MRD1Q06106 887 aaKnown RBP5.32□□□□□ -1.56
PAN1YIR006C NOP53Q12080 455 aaKnown RBP5.32□□□□□ -1.56
PAN1YIR006C HSP82P02829 709 aaKnown RBP5.32□□□□□ -1.56
PAN1YIR006C MRPL10P36520 322 aa5.32□□□□□ -1.56
PAN1YIR006C RNT1Q02555 471 aa5.32□□□□□ -1.56
PAN1YIR006C TLG2Q08144 397 aa5.32□□□□□ -1.56
PAN1YIR006C SMC3P47037 1230 aa5.32□□□□□ -1.56
PAN1YIR006C SGM1P47166 707 aa5.32□□□□□ -1.56
PAN1YIR006C YLH47Q06493 454 aa5.32□□□□□ -1.56
PAN1YIR006C RGP1P16664 663 aa5.32□□□□□ -1.56
PAN1YIR006C OLA1P38219 394 aaKnown RBP5.32□□□□□ -1.56
PAN1YIR006C RVS167P39743 482 aaKnown RBP5.32□□□□□ -1.56
PAN1YIR006C DSN1P40568 576 aa5.32□□□□□ -1.56
PAN1YIR006C TOP1P04786 769 aa5.31□□□□□ -1.56
PAN1YIR006C HST1P53685 503 aa5.31□□□□□ -1.56
PAN1YIR006C CSC1Q06538 782 aa5.31□□□□□ -1.56
PAN1YIR006C YCG1Q06680 1035 aa5.31□□□□□ -1.56
PAN1YIR006C SWC3P31376 625 aa5.31□□□□□ -1.56
PAN1YIR006C CCT5P40413 562 aaKnown RBP5.31□□□□□ -1.56
PAN1YIR006C CTR9P89105 1077 aa5.31□□□□□ -1.56
PAN1YIR006C RPN12P32496 274 aa5.31□□□□□ -1.56
PAN1YIR006C NDC80P40460 691 aa5.31□□□□□ -1.56
PAN1YIR006C TEA1P47988 759 aa5.31□□□□□ -1.56
PAN1YIR006C DSD1P53095 428 aa5.31□□□□□ -1.56
PAN1YIR006C YNL050CP53952 270 aa5.31□□□□□ -1.56
PAN1YIR006C SRT1Q03175 343 aa5.31□□□□□ -1.56
PAN1YIR006C LTE1P07866 1435 aa5.31□□□□□ -1.56
PAN1YIR006C PRP31P49704 494 aaPredicted RBP5.3□□□□□ -1.56
PAN1YIR006C RMT2Q03305 412 aa5.3□□□□□ -1.56
PAN1YIR006C SNT2P53127 1403 aa5.3□□□□□ -1.56
PAN1YIR006C GDT1P38301 280 aaPredicted RBP5.3□□□□□ -1.56
PAN1YIR006C TIM50Q02776 476 aa5.3□□□□□ -1.56
PAN1YIR006C TCB1Q12466 1186 aa5.3□□□□□ -1.56
PAN1YIR006C HXK1P04806 485 aaKnown RBP5.3□□□□□ -1.56
PAN1YIR006C RRP43P25359 394 aaPredicted RBP5.3□□□□□ -1.56
PAN1YIR006C SER1P33330 395 aaKnown RBP5.3□□□□□ -1.56
PAN1YIR006C NUP145P49687 1317 aa5.3□□□□□ -1.56
PAN1YIR006C SPC110P32380 944 aa5.3□□□□□ -1.56
PAN1YIR006C YGR130CP53278 816 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms