RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YLR346CQ06139 101 aa7.62□□□□□ -1.19
SDS3YIL084C NUP85P46673 744 aa7.61□□□□□ -1.19
SDS3YIL084C MTC5Q03897 1148 aa7.61□□□□□ -1.19
SDS3YIL084C HPF1Q05164 967 aa7.61□□□□□ -1.19
SDS3YIL084C YGR035CP53222 116 aa7.6□□□□□ -1.19
SDS3YIL084C TYW1Q08960 810 aaKnown RBP7.6□□□□□ -1.19
SDS3YIL084C TY1A-BLQ12266 440 aa7.6□□□□□ -1.19
SDS3YIL084C TBF1Q02457 562 aa7.59□□□□□ -1.19
SDS3YIL084C SCW11P53189 542 aa7.57□□□□□ -1.2
SDS3YIL084C ITT1Q04638 464 aa7.57□□□□□ -1.2
SDS3YIL084C KOG1P38873 1557 aa7.57□□□□□ -1.2
SDS3YIL084C MIP1P15801 1254 aa7.56□□□□□ -1.2
SDS3YIL084C HST2P53686 357 aa7.55□□□□□ -1.2
SDS3YIL084C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
SDS3YIL084C HGH1P48362 394 aaKnown RBP7.52□□□□□ -1.21
SDS3YIL084C DMA2P53924 522 aa7.52□□□□□ -1.21
SDS3YIL084C ESS1P22696 170 aa7.51□□□□□ -1.21
SDS3YIL084C VAC17P25591 423 aa7.51□□□□□ -1.21
SDS3YIL084C MMP1Q12372 583 aa7.51□□□□□ -1.21
SDS3YIL084C DLD1P32891 587 aa7.5□□□□□ -1.21
SDS3YIL084C AAD14P42884 376 aa7.5□□□□□ -1.21
SDS3YIL084C YJU3P28321 313 aa7.49□□□□□ -1.21
SDS3YIL084C YBL086CP38177 466 aa7.49□□□□□ -1.21
SDS3YIL084C APP1P53933 587 aa7.49□□□□□ -1.21
SDS3YIL084C GUA1P38625 525 aaKnown RBP7.47□□□□□ -1.21
SDS3YIL084C YJR098CP47139 656 aa7.47□□□□□ -1.21
SDS3YIL084C LSC2P53312 427 aa7.47□□□□□ -1.21
SDS3YIL084C TY1B-DR4Q07793 1604 aa7.46□□□□□ -1.21
SDS3YIL084C ARG82P07250 355 aa7.46□□□□□ -1.22
SDS3YIL084C RTT106P40161 455 aa7.46□□□□□ -1.22
SDS3YIL084C TCB1Q12466 1186 aa7.46□□□□□ -1.22
SDS3YIL084C SSA2P10592 639 aaKnown RBP7.45□□□□□ -1.22
SDS3YIL084C GLN1P32288 370 aaKnown RBP7.44□□□□□ -1.22
SDS3YIL084C CSN12P47130 423 aa7.44□□□□□ -1.22
SDS3YIL084C HPC2Q01448 625 aa7.44□□□□□ -1.22
SDS3YIL084C UBP2Q01476 1272 aa7.44□□□□□ -1.22
SDS3YIL084C ROG3P43602 733 aa7.43□□□□□ -1.22
SDS3YIL084C RSC30P38781 883 aa7.42□□□□□ -1.22
SDS3YIL084C CCP1P00431 361 aa7.41□□□□□ -1.22
SDS3YIL084C OSH7P38755 437 aa7.41□□□□□ -1.22
SDS3YIL084C BRL1P38770 471 aa7.4□□□□□ -1.22
SDS3YIL084C EMW1P42842 904 aaKnown RBP7.4□□□□□ -1.22
SDS3YIL084C TY1A-MR1Q04215 440 aa7.4□□□□□ -1.22
SDS3YIL084C KTR1P27810 393 aaKnown RBP7.38□□□□□ -1.23
SDS3YIL084C TCB3Q03640 1545 aaKnown RBP7.37□□□□□ -1.23
SDS3YIL084C MDJ1P35191 511 aa7.37□□□□□ -1.23
SDS3YIL084C ICP55P40051 511 aa7.37□□□□□ -1.23
SDS3YIL084C TFB3Q03290 321 aa7.36□□□□□ -1.23
SDS3YIL084C YPR204WQ08995 1032 aa7.35□□□□□ -1.23
SDS3YIL084C LSB3P43603 459 aaKnown RBP7.34□□□□□ -1.23
SDS3YIL084C DFG5Q05031 458 aa7.34□□□□□ -1.23
SDS3YIL084C FIG4P42837 879 aa7.33□□□□□ -1.24
SDS3YIL084C NAM8Q00539 523 aaKnown RBP7.33□□□□□ -1.24
SDS3YIL084C PKH3Q03306 898 aaPredicted RBP7.32□□□□□ -1.24
SDS3YIL084C DPH6Q12429 685 aa7.32□□□□□ -1.24
SDS3YIL084C PUS1Q12211 544 aaKnown RBP7.3□□□□□ -1.24
SDS3YIL084C MKS1P34072 584 aa7.29□□□□□ -1.24
SDS3YIL084C CDC19P00549 500 aaKnown RBP7.28□□□□□ -1.24
SDS3YIL084C ARG8P18544 423 aa7.28□□□□□ -1.24
SDS3YIL084C RLF2Q12495 606 aa7.27□□□□□ -1.25
SDS3YIL084C PKC1P24583 1151 aa7.26□□□□□ -1.25
SDS3YIL084C LYS5P50113 272 aa7.26□□□□□ -1.25
SDS3YIL084C JJJ3P47138 172 aa7.25□□□□□ -1.25
SDS3YIL084C RAD59Q12223 238 aa7.25□□□□□ -1.25
SDS3YIL084C YBL036CP38197 257 aa7.24□□□□□ -1.25
SDS3YIL084C PHM7Q12252 991 aa7.23□□□□□ -1.25
SDS3YIL084C YPR084WQ06821 456 aa7.22□□□□□ -1.25
SDS3YIL084C BDS1Q08347 646 aa7.22□□□□□ -1.25
SDS3YIL084C CSE4P36012 229 aa7.21□□□□□ -1.26
SDS3YIL084C YFL066CP43538 392 aa7.21□□□□□ -1.26
SDS3YIL084C SPA2P23201 1466 aaKnown RBP7.2□□□□□ -1.26
SDS3YIL084C STE6P12866 1290 aa7.2□□□□□ -1.26
SDS3YIL084C FBP26P32604 452 aa7.2□□□□□ -1.26
SDS3YIL084C YJL007CP47080 104 aa7.2□□□□□ -1.26
SDS3YIL084C NSG2P53898 299 aa7.2□□□□□ -1.26
SDS3YIL084C THI72Q08579 599 aa7.19□□□□□ -1.26
SDS3YIL084C CUZ1P53899 274 aa7.18□□□□□ -1.26
SDS3YIL084C TEC1P18412 486 aa7.17□□□□□ -1.26
SDS3YIL084C RPL34BP40525 121 aaKnown RBP7.17□□□□□ -1.26
SDS3YIL084C BIM1P40013 344 aa7.16□□□□□ -1.26
SDS3YIL084C SPT6P23615 1451 aaKnown RBP7.15□□□□□ -1.27
SDS3YIL084C HSL1P34244 1518 aa7.15□□□□□ -1.27
SDS3YIL084C MAK16P10962 306 aaPredicted RBP7.13□□□□□ -1.27
SDS3YIL084C SPT5P27692 1063 aaKnown RBP7.13□□□□□ -1.27
SDS3YIL084C ATG32P40458 529 aa7.13□□□□□ -1.27
SDS3YIL084C VTC4P47075 721 aa7.13□□□□□ -1.27
SDS3YIL084C SGS1P35187 1447 aa7.12□□□□□ -1.27
SDS3YIL084C BIO2P32451 375 aa7.12□□□□□ -1.27
SDS3YIL084C CCT8P47079 568 aaKnown RBP7.12□□□□□ -1.27
SDS3YIL084C AI1P03875 834 aa7.11□□□□□ -1.27
SDS3YIL084C ISU1Q03020 165 aa7.11□□□□□ -1.27
SDS3YIL084C ECM5Q03214 1411 aa7.1□□□□□ -1.27
SDS3YIL084C DAL1P32375 460 aa7.1□□□□□ -1.27
SDS3YIL084C TIF1P10081 395 aaKnown RBP7.09□□□□□ -1.27
SDS3YIL084C NRD1P53617 575 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
SDS3YIL084C YNL108CP53929 270 aa7.09□□□□□ -1.27
SDS3YIL084C CEM1P39525 442 aa7.08□□□□□ -1.28
SDS3YIL084C NAF1P53919 492 aaKnown RBP7.08□□□□□ -1.28
SDS3YIL084C ATG20Q07528 640 aa7.08□□□□□ -1.28
SDS3YIL084C GUT2P32191 649 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms