RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	BRE2	P43132	505 aa		6.29	□□□□□ -1.4
YPT35	YHR105W	MET32	Q12041	191 aa		6.29	□□□□□ -1.4
YPT35	YHR105W	TIF1	P10081	395 aa	Known RBP	6.28	□□□□□ -1.4
YPT35	YHR105W	IXR1	P33417	597 aa		6.28	□□□□□ -1.4
YPT35	YHR105W	ASH1	P34233	588 aa		6.28	□□□□□ -1.4
YPT35	YHR105W	HST3	P53687	447 aa		6.28	□□□□□ -1.4
YPT35	YHR105W	SUP45	P12385	437 aa	Known RBP	6.27	□□□□□ -1.41
YPT35	YHR105W	AFT1	P22149	690 aa		6.26	□□□□□ -1.41
YPT35	YHR105W	ENO2	P00925	437 aa	Known RBP	6.25	□□□□□ -1.41
YPT35	YHR105W	VAC17	P25591	423 aa		6.25	□□□□□ -1.41
YPT35	YHR105W	FIG4	P42837	879 aa		6.25	□□□□□ -1.41
YPT35	YHR105W	SUB2	Q07478	446 aa	Known RBP	6.25	□□□□□ -1.41
YPT35	YHR105W	SPT5	P27692	1063 aa	Known RBP	6.24	□□□□□ -1.41
YPT35	YHR105W	RPL34B	P40525	121 aa	Known RBP	6.23	□□□□□ -1.41
YPT35	YHR105W	NAF1	P53919	492 aa	Known RBP	6.23	□□□□□ -1.41
YPT35	YHR105W	ITT1	Q04638	464 aa		6.23	□□□□□ -1.41
YPT35	YHR105W	RTG2	P32608	588 aa	Known RBP	6.22	□□□□□ -1.41
YPT35	YHR105W	YPR084W	Q06821	456 aa		6.22	□□□□□ -1.41
YPT35	YHR105W	YPR204W	Q08995	1032 aa		6.22	□□□□□ -1.41
YPT35	YHR105W	ISF1	P32488	338 aa		6.21	□□□□□ -1.42
YPT35	YHR105W	MCM16	Q12262	181 aa		6.21	□□□□□ -1.42
YPT35	YHR105W	TEC1	P18412	486 aa		6.2	□□□□□ -1.42
YPT35	YHR105W	UGA3	P26370	528 aa		6.2	□□□□□ -1.42
YPT35	YHR105W	MRT4	P33201	236 aa	Known RBP	6.2	□□□□□ -1.42
YPT35	YHR105W	ENO1	P00924	437 aa	Known RBP	6.19	□□□□□ -1.42
YPT35	YHR105W	SSA1	P10591	642 aa	Known RBP	6.19	□□□□□ -1.42
YPT35	YHR105W	RIM21	P48565	533 aa		6.19	□□□□□ -1.42
YPT35	YHR105W	MSB3	P48566	633 aa	Predicted RBP	6.19	□□□□□ -1.42
YPT35	YHR105W	GEF1	P37020	779 aa		6.18	□□□□□ -1.42
YPT35	YHR105W	EMP47	P43555	445 aa		6.18	□□□□□ -1.42
YPT35	YHR105W	YJR115W	P47152	169 aa		6.18	□□□□□ -1.42
YPT35	YHR105W	YML020W	Q03722	664 aa		6.18	□□□□□ -1.42
YPT35	YHR105W	MRX10	Q05648	414 aa		6.18	□□□□□ -1.42
YPT35	YHR105W	CPS1	P27614	576 aa		6.17	□□□□□ -1.42
YPT35	YHR105W	TTI1	P36097	1038 aa		6.17	□□□□□ -1.42
YPT35	YHR105W	APP1	P53933	587 aa		6.17	□□□□□ -1.42
YPT35	YHR105W	RDS2	P19541	446 aa	Known RBP	6.16	□□□□□ -1.42
YPT35	YHR105W	GUT2	P32191	649 aa		6.16	□□□□□ -1.42
YPT35	YHR105W	FRA1	Q07825	749 aa		6.16	□□□□□ -1.42
YPT35	YHR105W	NOP8	Q08287	484 aa	Predicted RBP	6.16	□□□□□ -1.42
YPT35	YHR105W	SRF1	Q12516	437 aa		6.16	□□□□□ -1.42
YPT35	YHR105W	GAR1	P28007	205 aa	Known RBP	6.15	□□□□□ -1.42
YPT35	YHR105W	RTT106	P40161	455 aa		6.15	□□□□□ -1.42
YPT35	YHR105W	STE20	Q03497	939 aa	Known RBP	6.15	□□□□□ -1.42
YPT35	YHR105W	MET22	P32179	357 aa		6.14	□□□□□ -1.43
YPT35	YHR105W	EMW1	P42842	904 aa	Known RBP	6.14	□□□□□ -1.43
YPT35	YHR105W	YPP1	P46951	817 aa		6.13	□□□□□ -1.43
YPT35	YHR105W	PTK2	P47116	818 aa	Known RBP	6.13	□□□□□ -1.43
YPT35	YHR105W	NOB1	Q08444	459 aa	Known RBP	6.13	□□□□□ -1.43
YPT35	YHR105W	SSA4	P22202	642 aa	Known RBP	6.12	□□□□□ -1.43
YPT35	YHR105W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.12	□□□□□ -1.43	not detected
YPT35	YHR105W	YBL086C	P38177	466 aa		6.12	□□□□□ -1.43
YPT35	YHR105W	APL6	P46682	809 aa		6.12	□□□□□ -1.43
YPT35	YHR105W	YDR444W	Q04093	687 aa		6.12	□□□□□ -1.43
YPT35	YHR105W	ENV9	Q08651	330 aa		6.12	□□□□□ -1.43
YPT35	YHR105W	PEP12	P32854	288 aa		6.11	□□□□□ -1.43
YPT35	YHR105W	YML083C	Q04526	418 aa		6.1	□□□□□ -1.43
YPT35	YHR105W	MKS1	P34072	584 aa		6.09	□□□□□ -1.43
YPT35	YHR105W	SLX8	P40072	274 aa		6.09	□□□□□ -1.43
YPT35	YHR105W	LCB5	Q06147	687 aa	Known RBP	6.09	□□□□□ -1.43
YPT35	YHR105W	ARG82	P07250	355 aa		6.08	□□□□□ -1.44
YPT35	YHR105W	SOH1	P38633	127 aa		6.08	□□□□□ -1.44
YPT35	YHR105W	MRX12	P47084	519 aa		6.08	□□□□□ -1.44
YPT35	YHR105W	PUP1	P25043	261 aa		6.07	□□□□□ -1.44
YPT35	YHR105W	KTR7	P40504	517 aa		6.07	□□□□□ -1.44
YPT35	YHR105W	NUP85	P46673	744 aa		6.07	□□□□□ -1.44
YPT35	YHR105W	DFG5	Q05031	458 aa		6.07	□□□□□ -1.44
YPT35	YHR105W	YLR346C	Q06139	101 aa		6.07	□□□□□ -1.44
YPT35	YHR105W	HAL5	P38970	855 aa	Known RBP	6.06	□□□□□ -1.44
YPT35	YHR105W	AAD14	P42884	376 aa		6.06	□□□□□ -1.44
YPT35	YHR105W	ATG20	Q07528	640 aa		6.06	□□□□□ -1.44
YPT35	YHR105W	FBP26	P32604	452 aa		6.05	□□□□□ -1.44
YPT35	YHR105W	ISR1	Q06098	443 aa	Known RBP	6.05	□□□□□ -1.44
YPT35	YHR105W	BDS1	Q08347	646 aa		6.05	□□□□□ -1.44
YPT35	YHR105W	TGL4	P36165	910 aa		6.04	□□□□□ -1.44
YPT35	YHR105W	OPT2	Q06593	877 aa		6.04	□□□□□ -1.44
YPT35	YHR105W	SIS2	P36024	562 aa		6.03	□□□□□ -1.44
YPT35	YHR105W	ATG3	P40344	310 aa		6.03	□□□□□ -1.44
YPT35	YHR105W	LSC2	P53312	427 aa		6.03	□□□□□ -1.44
YPT35	YHR105W	UTP13	Q05946	817 aa	Known RBP	6.03	□□□□□ -1.44
YPT35	YHR105W	ISU1	Q03020	165 aa		6.02	□□□□□ -1.45
YPT35	YHR105W	STE6	P12866	1290 aa		6.01	□□□□□ -1.45
YPT35	YHR105W	MIP1	P15801	1254 aa		6.01	□□□□□ -1.45
YPT35	YHR105W	DLD1	P32891	587 aa		6.01	□□□□□ -1.45
YPT35	YHR105W	YPL062W	Q02781	134 aa		6.01	□□□□□ -1.45
YPT35	YHR105W	RGA1	P39083	1007 aa		6	□□□□□ -1.45
YPT35	YHR105W	ECM23	Q02710	187 aa		6	□□□□□ -1.45
YPT35	YHR105W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6	□□□□□ -1.45	not detected
YPT35	YHR105W	RPP2B	P02400	110 aa	Known RBP	5.99	□□□□□ -1.45
YPT35	YHR105W	GAL2	P13181	574 aa		5.99	□□□□□ -1.45
YPT35	YHR105W	GLY1	P37303	387 aa	Known RBP	5.99	□□□□□ -1.45
YPT35	YHR105W	YJR098C	P47139	656 aa		5.99	□□□□□ -1.45
YPT35	YHR105W	SCW11	P53189	542 aa		5.99	□□□□□ -1.45
YPT35	YHR105W	UBP2	Q01476	1272 aa		5.99	□□□□□ -1.45
YPT35	YHR105W	HDA3	Q06623	655 aa		5.99	□□□□□ -1.45
YPT35	YHR105W	ACS2	P52910	683 aa	Known RBP	5.98	□□□□□ -1.45
YPT35	YHR105W	PDI1	P17967	522 aa	Known RBP	5.97	□□□□□ -1.45
YPT35	YHR105W	CDC3	P32457	520 aa	Known RBP	5.97	□□□□□ -1.45
YPT35	YHR105W	SSF1	P38789	453 aa	Predicted RBP	5.97	□□□□□ -1.45
YPT35	YHR105W	DLD3	P39976	496 aa	Known RBP	5.97	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms