RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W ISU2Q12056 156 aa9.45□□□□□ -0.9
MSP1YGR028W YNR021WP53723 404 aaKnown RBP9.44□□□□□ -0.9
MSP1YGR028W GAP1P19145 602 aaPredicted RBP9.43□□□□□ -0.9
MSP1YGR028W NMA111P53920 997 aa9.43□□□□□ -0.9
MSP1YGR028W HAP5Q02516 242 aa9.43□□□□□ -0.9
MSP1YGR028W TFB4Q12004 338 aa9.43□□□□□ -0.9
MSP1YGR028W IML1P47170 1584 aa9.42□□□□□ -0.9
MSP1YGR028W CHL1P22516 861 aaPredicted RBP9.42□□□□□ -0.9
MSP1YGR028W PRE3P38624 215 aa9.42□□□□□ -0.9
MSP1YGR028W PEX21P50091 288 aa9.42□□□□□ -0.9
MSP1YGR028W ELP4Q02884 456 aaKnown RBP9.42□□□□□ -0.9
MSP1YGR028W NUP188P52593 1655 aaKnown RBP9.4□□□□□ -0.9
MSP1YGR028W DIT2P21595 489 aa9.4□□□□□ -0.9
MSP1YGR028W RPN1P38764 993 aaKnown RBP9.4□□□□□ -0.9
MSP1YGR028W THI12P42883 340 aa9.4□□□□□ -0.9
MSP1YGR028W THI5P43534 340 aa9.4□□□□□ -0.9
MSP1YGR028W THI11P47183 340 aa9.4□□□□□ -0.9
MSP1YGR028W THI13Q07748 340 aa9.4□□□□□ -0.9
MSP1YGR028W VMR1P38735 1592 aa9.39□□□□□ -0.91
MSP1YGR028W PDR5P33302 1511 aaKnown RBP9.39□□□□□ -0.91
MSP1YGR028W USO1P25386 1790 aa9.38□□□□□ -0.91
MSP1YGR028W SPT23P35210 1082 aa9.37□□□□□ -0.91
MSP1YGR028W MVP1P40959 511 aaKnown RBP9.37□□□□□ -0.91
MSP1YGR028W BNI4P53858 892 aa9.37□□□□□ -0.91
MSP1YGR028W RGR1P19263 1082 aa9.36□□□□□ -0.91
MSP1YGR028W CLB5P30283 435 aa9.36□□□□□ -0.91
MSP1YGR028W SSM4P40318 1319 aa9.35□□□□□ -0.91
MSP1YGR028W IKI3Q06706 1349 aaKnown RBP9.35□□□□□ -0.91
MSP1YGR028W YMR196WQ04336 1088 aa9.35□□□□□ -0.91
MSP1YGR028W LEO1P38439 464 aa9.34□□□□□ -0.91
MSP1YGR028W ATF2P53296 535 aa9.33□□□□□ -0.92
MSP1YGR028W AIM7Q12156 149 aa9.33□□□□□ -0.92
MSP1YGR028W HAP1P0CE41 1502 aa9.31□□□□□ -0.92
MSP1YGR028W YDR344CQ05510 147 aa9.3□□□□□ -0.92
MSP1YGR028W TUM1Q08686 304 aaKnown RBP9.3□□□□□ -0.92
MSP1YGR028W PTC2P39966 464 aaKnown RBP9.29□□□□□ -0.92
MSP1YGR028W YPR109WQ06104 294 aa9.29□□□□□ -0.92
MSP1YGR028W YRR1Q12172 810 aa9.29□□□□□ -0.92
MSP1YGR028W PDR11P40550 1411 aa9.29□□□□□ -0.92
MSP1YGR028W GLC3P32775 704 aa9.28□□□□□ -0.92
MSP1YGR028W TEA1P47988 759 aa9.28□□□□□ -0.92
MSP1YGR028W YML082WQ04533 649 aaKnown RBP9.27□□□□□ -0.93
MSP1YGR028W KRE5P22023 1365 aa9.25□□□□□ -0.93
MSP1YGR028W TY1B-NL2Q99337 1749 aaKnown RBP9.25□□□□□ -0.93
MSP1YGR028W RIA1P53893 1110 aa9.22□□□□□ -0.93
MSP1YGR028W NPL4P33755 580 aa9.2□□□□□ -0.94
MSP1YGR028W MRX12P47084 519 aa9.2□□□□□ -0.94
MSP1YGR028W PDR1P12383 1068 aa9.19□□□□□ -0.94
MSP1YGR028W KIN1P13185 1064 aa9.19□□□□□ -0.94
MSP1YGR028W NUD1P32336 851 aa9.18□□□□□ -0.94
MSP1YGR028W BCK2P33306 851 aa9.18□□□□□ -0.94
MSP1YGR028W RAM1P22007 431 aa9.17□□□□□ -0.94
MSP1YGR028W CFT1Q06632 1357 aaKnown RBP9.16□□□□□ -0.94
MSP1YGR028W APP1P53933 587 aa9.16□□□□□ -0.94
MSP1YGR028W YNR029CP53729 429 aaKnown RBP9.15□□□□□ -0.94
MSP1YGR028W VRP1P37370 817 aa9.14□□□□□ -0.95
MSP1YGR028W GCN2P15442 1659 aa9.13□□□□□ -0.95
MSP1YGR028W SIT4P20604 311 aa9.13□□□□□ -0.95
MSP1YGR028W CAB1Q04430 367 aa9.13□□□□□ -0.95
MSP1YGR028W PAF1P38351 445 aa9.12□□□□□ -0.95
MSP1YGR028W RTF1P53064 558 aa9.12□□□□□ -0.95
MSP1YGR028W RAD9P14737 1309 aa9.11□□□□□ -0.95
MSP1YGR028W BCK1Q01389 1478 aa9.11□□□□□ -0.95
MSP1YGR028W NIS1P53939 407 aa9.11□□□□□ -0.95
MSP1YGR028W RAV1P47104 1357 aa9.11□□□□□ -0.95
MSP1YGR028W ISM1P48526 1002 aa9.1□□□□□ -0.95
MSP1YGR028W SAS4Q04003 481 aa9.1□□□□□ -0.95
MSP1YGR028W YPR015CQ12531 247 aa9.1□□□□□ -0.95
MSP1YGR028W STR2P47164 639 aa9.09□□□□□ -0.95
MSP1YGR028W GLN1P32288 370 aaKnown RBP9.08□□□□□ -0.96
MSP1YGR028W FPK1P53739 893 aa9.08□□□□□ -0.96
MSP1YGR028W YNL115CP53925 644 aa9.08□□□□□ -0.96
MSP1YGR028W BUD20Q08004 166 aaPredicted RBP9.08□□□□□ -0.96
MSP1YGR028W PRT1P06103 763 aaKnown RBP9.07□□□□□ -0.96
MSP1YGR028W HST2P53686 357 aa9.07□□□□□ -0.96
MSP1YGR028W GCD11P32481 527 aaKnown RBP9.06□□□□□ -0.96
MSP1YGR028W XDJ1P39102 459 aa9.06□□□□□ -0.96
MSP1YGR028W GYP1Q08484 637 aa9.06□□□□□ -0.96
MSP1YGR028W TY3B-IQ7LHG5 1498 aaKnown RBP9.05□□□□□ -0.96
MSP1YGR028W ALD4P46367 519 aaKnown RBP9.05□□□□□ -0.96
MSP1YGR028W CSN12P47130 423 aa9.05□□□□□ -0.96
MSP1YGR028W RTC1Q08281 1341 aa9.05□□□□□ -0.96
MSP1YGR028W SSA2P10592 639 aaKnown RBP9.04□□□□□ -0.96
MSP1YGR028W KEX2P13134 814 aa9.03□□□□□ -0.96
MSP1YGR028W MMP1Q12372 583 aa9.03□□□□□ -0.96
MSP1YGR028W NOP7P53261 605 aaKnown RBP9.02□□□□□ -0.97
MSP1YGR028W PAT1P25644 796 aaKnown RBP9.01□□□□□ -0.97
MSP1YGR028W ENT1Q12518 454 aa9.01□□□□□ -0.97
MSP1YGR028W NUP192P47054 1683 aa9□□□□□ -0.97
MSP1YGR028W MRF1P30775 413 aaPredicted RBP8.99□□□□□ -0.97
MSP1YGR028W TY1A-DR4O74302 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-HP0C2I4 478 aaKnown RBP8.98□□□□□ -0.97
MSP1YGR028W TY1A-AP0CX57 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-PR1P0CX58 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-ORP0CX59 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-PR2P0CX60 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-DR5P0CX65 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-ER2P0CX66 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-GR3P0CX67 440 aa8.98□□□□□ -0.97
MSP1YGR028W TY1A-LR1P0CX68 440 aa8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms