RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A DSD1P53095 428 aa12.04□□□□□ -0.48
LSB3YFR024C-A INP54Q08227 384 aaKnown RBP12.04□□□□□ -0.48
LSB3YFR024C-A PSD2P53037 1138 aaKnown RBP12.03□□□□□ -0.48
LSB3YFR024C-A CTF4Q01454 927 aa12.03□□□□□ -0.48
LSB3YFR024C-A SSA2P10592 639 aaKnown RBP12.01□□□□□ -0.49
LSB3YFR024C-A SPT7P35177 1332 aa12□□□□□ -0.49
LSB3YFR024C-A HSP104P31539 908 aaKnown RBP12□□□□□ -0.49
LSB3YFR024C-A AKL1P38080 1108 aaKnown RBP12□□□□□ -0.49
LSB3YFR024C-A CTH1P47976 325 aa12□□□□□ -0.49
LSB3YFR024C-A OSM1P21375 501 aaKnown RBP11.99□□□□□ -0.49
LSB3YFR024C-A NUP145P49687 1317 aa11.98□□□□□ -0.49
LSB3YFR024C-A MSB4Q12317 492 aa11.98□□□□□ -0.49
LSB3YFR024C-A GRX1P25373 110 aaKnown RBP11.96□□□□□ -0.49
LSB3YFR024C-A BDF1P35817 686 aa11.96□□□□□ -0.49
LSB3YFR024C-A YBP2P53169 641 aa11.94□□□□□ -0.5
LSB3YFR024C-A IOC4Q04213 475 aa11.94□□□□□ -0.5
LSB3YFR024C-A AOS1Q06624 347 aa11.94□□□□□ -0.5
LSB3YFR024C-A RAD4P14736 754 aa11.93□□□□□ -0.5
LSB3YFR024C-A RRP46P53256 223 aaPredicted RBP11.92□□□□□ -0.5
LSB3YFR024C-A BUG1Q12191 341 aa11.92□□□□□ -0.5
LSB3YFR024C-A ALD3P54114 506 aa11.91□□□□□ -0.5
LSB3YFR024C-A NTH2P35172 780 aa11.9□□□□□ -0.5
LSB3YFR024C-A GRE2Q12068 342 aaKnown RBP11.9□□□□□ -0.5
LSB3YFR024C-A KCC4P25389 1037 aa11.89□□□□□ -0.51
LSB3YFR024C-A RTR1P40084 226 aaPredicted RBP11.88□□□□□ -0.51
LSB3YFR024C-A UTP22P53254 1237 aaPredicted RBP11.87□□□□□ -0.51
LSB3YFR024C-A RMT2Q03305 412 aa11.86□□□□□ -0.51
LSB3YFR024C-A UGA3P26370 528 aa11.84□□□□□ -0.51
LSB3YFR024C-A TUM1Q08686 304 aaKnown RBP11.84□□□□□ -0.51
LSB3YFR024C-A PRD1P25375 712 aa11.83□□□□□ -0.52
LSB3YFR024C-A YNL050CP53952 270 aa11.83□□□□□ -0.52
LSB3YFR024C-A MDG1P53885 366 aa11.82□□□□□ -0.52
LSB3YFR024C-A TSR3Q12094 313 aaKnown RBP11.82□□□□□ -0.52
LSB3YFR024C-A ALE1Q08548 619 aa11.81□□□□□ -0.52
LSB3YFR024C-A TOS1P38288 455 aa11.8□□□□□ -0.52
LSB3YFR024C-A NSE3Q05541 303 aa11.8□□□□□ -0.52
LSB3YFR024C-A NOP53Q12080 455 aaKnown RBP11.8□□□□□ -0.52
LSB3YFR024C-A UTP10P42945 1769 aaKnown RBP11.8□□□□□ -0.52
LSB3YFR024C-A LYS2P07702 1392 aa11.8□□□□□ -0.52
LSB3YFR024C-A HPC2Q01448 625 aa11.78□□□□□ -0.52
LSB3YFR024C-A MAM1P40065 302 aa11.77□□□□□ -0.53
LSB3YFR024C-A PHM7Q12252 991 aa11.77□□□□□ -0.53
LSB3YFR024C-A NYV1Q12255 253 aa11.77□□□□□ -0.53
LSB3YFR024C-A SAP155P43612 1002 aa11.76□□□□□ -0.53
LSB3YFR024C-A MPP10P47083 593 aaKnown RBP11.76□□□□□ -0.53
LSB3YFR024C-A TEA1P47988 759 aa11.76□□□□□ -0.53
LSB3YFR024C-A ZDS1P50111 915 aaKnown RBP11.76□□□□□ -0.53
LSB3YFR024C-A THI22Q06490 572 aa11.76□□□□□ -0.53
LSB3YFR024C-A SSP2Q08646 371 aa11.76□□□□□ -0.53
LSB3YFR024C-A BUD27P43573 796 aaKnown RBP RIP-Chip data11.75□□□□□ -0.53not detected
LSB3YFR024C-A YDL144CQ07589 356 aa11.75□□□□□ -0.53
LSB3YFR024C-A SSA1P10591 642 aaKnown RBP11.74□□□□□ -0.53
LSB3YFR024C-A YCK3P39962 524 aa11.73□□□□□ -0.53
LSB3YFR024C-A YFR016CP43597 1233 aaKnown RBP11.72□□□□□ -0.53
LSB3YFR024C-A RIX7Q07844 837 aaKnown RBP11.72□□□□□ -0.53
LSB3YFR024C-A RRT14P40470 206 aa11.71□□□□□ -0.53
LSB3YFR024C-A RTT109Q07794 436 aa11.71□□□□□ -0.53
LSB3YFR024C-A SER1P33330 395 aaKnown RBP11.7□□□□□ -0.54
LSB3YFR024C-A MSN5P52918 1224 aa11.7□□□□□ -0.54
LSB3YFR024C-A BMS1Q08965 1183 aaKnown RBP11.7□□□□□ -0.54
LSB3YFR024C-A RPP0P05317 312 aaKnown RBP11.69□□□□□ -0.54
LSB3YFR024C-A GYP7P48365 746 aa11.69□□□□□ -0.54
LSB3YFR024C-A COQ4O13525 335 aa11.68□□□□□ -0.54
LSB3YFR024C-A EAF6P47128 113 aa11.68□□□□□ -0.54
LSB3YFR024C-A HEF3P53978 1044 aaKnown RBP11.68□□□□□ -0.54
LSB3YFR024C-A RPL17AP05740 184 aaKnown RBP11.67□□□□□ -0.54
LSB3YFR024C-A LPD1P09624 499 aaKnown RBP11.67□□□□□ -0.54
LSB3YFR024C-A RPL17BP46990 184 aaKnown RBP11.67□□□□□ -0.54
LSB3YFR024C-A RAT1Q02792 1006 aaKnown RBP11.67□□□□□ -0.54
LSB3YFR024C-A TPD3P31383 635 aa11.67□□□□□ -0.54
LSB3YFR024C-A YGL082WP53155 381 aa11.67□□□□□ -0.54
LSB3YFR024C-A CTI6Q08923 506 aa11.67□□□□□ -0.54
LSB3YFR024C-A CTT1P06115 562 aa11.66□□□□□ -0.54
LSB3YFR024C-A YKL222CP35995 705 aa11.66□□□□□ -0.54
LSB3YFR024C-A ERT1P38140 529 aa11.66□□□□□ -0.54
LSB3YFR024C-A ARG8P18544 423 aa11.65□□□□□ -0.55
LSB3YFR024C-A YBR287WP38355 427 aa11.65□□□□□ -0.55
LSB3YFR024C-A YOL057WQ08225 711 aa11.64□□□□□ -0.55
LSB3YFR024C-A DIB1Q06819 143 aaPredicted RBP11.63□□□□□ -0.55
LSB3YFR024C-A PFF1P38244 976 aa11.62□□□□□ -0.55
LSB3YFR024C-A YER156CP40093 338 aaKnown RBP11.62□□□□□ -0.55
LSB3YFR024C-A VPS27P40343 622 aaKnown RBP11.62□□□□□ -0.55
LSB3YFR024C-A VPS64Q03944 604 aa11.62□□□□□ -0.55
LSB3YFR024C-A YPR204WQ08995 1032 aa11.62□□□□□ -0.55
LSB3YFR024C-A APL2P36000 726 aaPredicted RBP11.61□□□□□ -0.55
LSB3YFR024C-A ZDS2P54786 942 aa11.61□□□□□ -0.55
LSB3YFR024C-A DCD1P06773 312 aa11.6□□□□□ -0.55
LSB3YFR024C-A DNM1P54861 757 aa11.6□□□□□ -0.55
LSB3YFR024C-A SRT1Q03175 343 aa11.6□□□□□ -0.55
LSB3YFR024C-A BDF2Q07442 638 aa11.6□□□□□ -0.55
LSB3YFR024C-A SSK22P25390 1331 aaPredicted RBP11.6□□□□□ -0.55
LSB3YFR024C-A SUI2P20459 304 aaKnown RBP11.59□□□□□ -0.55
LSB3YFR024C-A CWH41P53008 833 aa11.59□□□□□ -0.55
LSB3YFR024C-A KIN4Q01919 800 aa11.58□□□□□ -0.56
LSB3YFR024C-A CDC45Q08032 650 aa11.58□□□□□ -0.56
LSB3YFR024C-A YLR271WQ06152 274 aa11.57□□□□□ -0.56
LSB3YFR024C-A IRC3Q06683 689 aa11.57□□□□□ -0.56
LSB3YFR024C-A HAT1Q12341 374 aa11.56□□□□□ -0.56
LSB3YFR024C-A SMY1P32364 656 aaKnown RBP11.55□□□□□ -0.56
LSB3YFR024C-A CST6P40535 587 aa11.55□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms