RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W LAM6Q08001 693 aa9.23□□□□□ -0.93
PDA1YER178W PRP40P33203 583 aaKnown RBP9.22□□□□□ -0.93
PDA1YER178W YJL181WP46987 611 aa9.21□□□□□ -0.94
PDA1YER178W TUM1Q08686 304 aaKnown RBP9.21□□□□□ -0.94
PDA1YER178W NTH2P35172 780 aa9.2□□□□□ -0.94
PDA1YER178W SSA2P10592 639 aaKnown RBP9.19□□□□□ -0.94
PDA1YER178W ATG13Q06628 738 aa9.19□□□□□ -0.94
PDA1YER178W ISW2Q08773 1120 aa9.17□□□□□ -0.94
PDA1YER178W THI22Q06490 572 aa9.15□□□□□ -0.94
PDA1YER178W GRE2Q12068 342 aaKnown RBP9.15□□□□□ -0.94
PDA1YER178W PRD1P25375 712 aa9.14□□□□□ -0.95
PDA1YER178W GTT3P39996 337 aa9.14□□□□□ -0.95
PDA1YER178W RTR1P40084 226 aaPredicted RBP9.14□□□□□ -0.95
PDA1YER178W MPP10P47083 593 aaKnown RBP9.14□□□□□ -0.95
PDA1YER178W ALD2P47771 506 aa9.14□□□□□ -0.95
PDA1YER178W YBP2P53169 641 aa9.14□□□□□ -0.95
PDA1YER178W CTF4Q01454 927 aa9.14□□□□□ -0.95
PDA1YER178W MSB4Q12317 492 aa9.14□□□□□ -0.95
PDA1YER178W RPG1P38249 964 aaKnown RBP9.13□□□□□ -0.95
PDA1YER178W AOS1Q06624 347 aa9.13□□□□□ -0.95
PDA1YER178W ALE1Q08548 619 aa9.13□□□□□ -0.95
PDA1YER178W RAD4P14736 754 aa9.12□□□□□ -0.95
PDA1YER178W GRX1P25373 110 aaKnown RBP9.12□□□□□ -0.95
PDA1YER178W PMD1P32634 1753 aa9.12□□□□□ -0.95
PDA1YER178W BDF1P35817 686 aa9.11□□□□□ -0.95
PDA1YER178W UGA2P38067 497 aa9.11□□□□□ -0.95
PDA1YER178W IOC4Q04213 475 aa9.11□□□□□ -0.95
PDA1YER178W RTT109Q07794 436 aa9.11□□□□□ -0.95
PDA1YER178W TOS1P38288 455 aa9.1□□□□□ -0.95
PDA1YER178W HEF3P53978 1044 aaKnown RBP9.1□□□□□ -0.95
PDA1YER178W KCC4P25389 1037 aa9.09□□□□□ -0.95
PDA1YER178W YNL050CP53952 270 aa9.09□□□□□ -0.95
PDA1YER178W RIX7Q07844 837 aaKnown RBP9.09□□□□□ -0.95
PDA1YER178W NYV1Q12255 253 aa9.08□□□□□ -0.96
PDA1YER178W DCD1P06773 312 aa9.07□□□□□ -0.96
PDA1YER178W RMT2Q03305 412 aa9.07□□□□□ -0.96
PDA1YER178W YDL144CQ07589 356 aa9.07□□□□□ -0.96
PDA1YER178W BUG1Q12191 341 aa9.07□□□□□ -0.96
PDA1YER178W NOP53Q12080 455 aaKnown RBP9.06□□□□□ -0.96
PDA1YER178W COQ4O13525 335 aa9.05□□□□□ -0.96
PDA1YER178W ARG8P18544 423 aa9.05□□□□□ -0.96
PDA1YER178W SAP155P43612 1002 aa9.05□□□□□ -0.96
PDA1YER178W ZDS2P54786 942 aa9.05□□□□□ -0.96
PDA1YER178W YCK3P39962 524 aa9.04□□□□□ -0.96
PDA1YER178W BUD27P43573 796 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
PDA1YER178W EAF6P47128 113 aa9.04□□□□□ -0.96
PDA1YER178W TEA1P47988 759 aa9.04□□□□□ -0.96
PDA1YER178W ALD3P54114 506 aa9.04□□□□□ -0.96
PDA1YER178W LYS2P07702 1392 aa9.03□□□□□ -0.96
PDA1YER178W SUI2P20459 304 aaKnown RBP9.03□□□□□ -0.96
PDA1YER178W UGA3P26370 528 aa9.03□□□□□ -0.96
PDA1YER178W TPD3P31383 635 aa9.03□□□□□ -0.96
PDA1YER178W APL2P36000 726 aaPredicted RBP9.03□□□□□ -0.96
PDA1YER178W YBR287WP38355 427 aa9.03□□□□□ -0.96
PDA1YER178W DIP2Q12220 943 aaPredicted RBP9.03□□□□□ -0.96
PDA1YER178W RRT14P40470 206 aa9.02□□□□□ -0.97
PDA1YER178W UTP22P53254 1237 aaPredicted RBP9.02□□□□□ -0.97
PDA1YER178W BMS1Q08965 1183 aaKnown RBP9.02□□□□□ -0.97
PDA1YER178W YPR204WQ08995 1032 aa9.01□□□□□ -0.97
PDA1YER178W PHM7Q12252 991 aa9.01□□□□□ -0.97
PDA1YER178W ZDS1P50111 915 aaKnown RBP9□□□□□ -0.97
PDA1YER178W CTI6Q08923 506 aa9□□□□□ -0.97
PDA1YER178W YGL082WP53155 381 aa8.99□□□□□ -0.97
PDA1YER178W NSE3Q05541 303 aa8.98□□□□□ -0.97
PDA1YER178W SER1P33330 395 aaKnown RBP8.97□□□□□ -0.97
PDA1YER178W MAM1P40065 302 aa8.97□□□□□ -0.97
PDA1YER178W GYP7P48365 746 aa8.97□□□□□ -0.97
PDA1YER178W HPC2Q01448 625 aa8.97□□□□□ -0.97
PDA1YER178W KIN4Q01919 800 aa8.97□□□□□ -0.97
PDA1YER178W SRT1Q03175 343 aa8.97□□□□□ -0.97
PDA1YER178W YFR016CP43597 1233 aaKnown RBP8.96□□□□□ -0.98
PDA1YER178W YGR122WP53272 402 aa8.96□□□□□ -0.98
PDA1YER178W YOL057WQ08225 711 aa8.96□□□□□ -0.98
PDA1YER178W SSP2Q08646 371 aa8.96□□□□□ -0.98
PDA1YER178W ERT1P38140 529 aa8.95□□□□□ -0.98
PDA1YER178W VPS64Q03944 604 aa8.95□□□□□ -0.98
PDA1YER178W YDR306CQ06640 478 aa8.95□□□□□ -0.98
PDA1YER178W HKR1P41809 1802 aa8.95□□□□□ -0.98
PDA1YER178W SWI1P09547 1314 aa8.95□□□□□ -0.98
PDA1YER178W MSN5P52918 1224 aa8.94□□□□□ -0.98
PDA1YER178W FAS2P19097 1887 aaKnown RBP8.94□□□□□ -0.98
PDA1YER178W CAF20P12962 161 aaKnown RBP8.93□□□□□ -0.98
PDA1YER178W PRS1P32895 427 aaKnown RBP8.93□□□□□ -0.98
PDA1YER178W MDG1P53885 366 aa8.93□□□□□ -0.98
PDA1YER178W FCP1Q03254 732 aa8.93□□□□□ -0.98
PDA1YER178W DUR1,2P32528 1835 aaKnown RBP8.92□□□□□ -0.98
PDA1YER178W RPP0P05317 312 aaKnown RBP8.92□□□□□ -0.98
PDA1YER178W LPD1P09624 499 aaKnown RBP8.92□□□□□ -0.98
PDA1YER178W SSA1P10591 642 aaKnown RBP8.92□□□□□ -0.98
PDA1YER178W SMY1P32364 656 aaKnown RBP8.92□□□□□ -0.98
PDA1YER178W VPS27P40343 622 aaKnown RBP8.92□□□□□ -0.98
PDA1YER178W RVB2Q12464 471 aaKnown RBP8.92□□□□□ -0.98
PDA1YER178W CWH41P53008 833 aa8.91□□□□□ -0.98
PDA1YER178W NSR1P27476 414 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
PDA1YER178W UBP16Q02863 499 aa8.89□□□□□ -0.99
PDA1YER178W TSR3Q12094 313 aaKnown RBP8.89□□□□□ -0.99
PDA1YER178W MRP7P12687 371 aa8.88□□□□□ -0.99
PDA1YER178W SWC3P31376 625 aa8.88□□□□□ -0.99
PDA1YER178W RAD24P32641 659 aa8.88□□□□□ -0.99
PDA1YER178W PFF1P38244 976 aa8.88□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms