RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W SWC3P31376 625 aa4.48□□□□□ -1.69
CHD1YER164W ZDS2P54786 942 aa4.48□□□□□ -1.69
CHD1YER164W TY4B-HP0C2J7 1802 aa4.48□□□□□ -1.69
CHD1YER164W TY4B-JP47024 1803 aa4.48□□□□□ -1.69
CHD1YER164W RPP0P05317 312 aaKnown RBP4.47□□□□□ -1.69
CHD1YER164W KRI1P42846 591 aaKnown RBP4.47□□□□□ -1.69
CHD1YER164W CBF5P33322 483 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
CHD1YER164W TY1B-NL2Q99337 1749 aaKnown RBP4.47□□□□□ -1.69
CHD1YER164W TRP5P00931 707 aaKnown RBP4.47□□□□□ -1.69
CHD1YER164W NTH2P35172 780 aa4.46□□□□□ -1.69
CHD1YER164W YPP1P46951 817 aa4.46□□□□□ -1.7
CHD1YER164W PRP43P53131 767 aaKnown RBP4.46□□□□□ -1.7
CHD1YER164W BMS1Q08965 1183 aaKnown RBP4.46□□□□□ -1.7
CHD1YER164W SNF7P39929 240 aaKnown RBP4.46□□□□□ -1.7
CHD1YER164W SRT1Q03175 343 aa4.46□□□□□ -1.7
CHD1YER164W YRF1-4O13559 1382 aa4.46□□□□□ -1.7
CHD1YER164W RRP5Q05022 1729 aaKnown RBP4.46□□□□□ -1.7
CHD1YER164W ARL1P38116 183 aaKnown RBP4.45□□□□□ -1.7
CHD1YER164W YMR196WQ04336 1088 aa4.45□□□□□ -1.7
CHD1YER164W MIC60P36112 540 aa4.45□□□□□ -1.7
CHD1YER164W RCR1P38212 213 aa4.45□□□□□ -1.7
CHD1YER164W SLM3Q12093 417 aa4.45□□□□□ -1.7
CHD1YER164W RPO41P13433 1351 aaKnown RBP4.45□□□□□ -1.7
CHD1YER164W DJP1P40564 432 aa4.45□□□□□ -1.7
CHD1YER164W XKS1P42826 600 aa4.45□□□□□ -1.7
CHD1YER164W YGL081WP53156 320 aa4.45□□□□□ -1.7
CHD1YER164W COQ4O13525 335 aa4.44□□□□□ -1.7
CHD1YER164W SPO1P53541 631 aa4.44□□□□□ -1.7
CHD1YER164W CSI1Q04368 295 aa4.44□□□□□ -1.7
CHD1YER164W ZDS1P50111 915 aaKnown RBP4.44□□□□□ -1.7
CHD1YER164W JIP3O13555 125 aa4.44□□□□□ -1.7
CHD1YER164W OPY1P38271 328 aa4.44□□□□□ -1.7
CHD1YER164W SPB4P25808 606 aaPredicted RBP4.43□□□□□ -1.7
CHD1YER164W ALE1Q08548 619 aa4.43□□□□□ -1.7
CHD1YER164W REB1P21538 810 aa4.43□□□□□ -1.7
CHD1YER164W GYP7P48365 746 aa4.43□□□□□ -1.7
CHD1YER164W ENT1Q12518 454 aa4.43□□□□□ -1.7
CHD1YER164W YRF1-2P40105 1681 aa4.43□□□□□ -1.7
CHD1YER164W BUD27P43573 796 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CHD1YER164W MDG1P53885 366 aa4.43□□□□□ -1.7
CHD1YER164W MAK21Q12176 1025 aaKnown RBP4.43□□□□□ -1.7
CHD1YER164W RAD24P32641 659 aa4.42□□□□□ -1.7
CHD1YER164W MIF2P35201 549 aa4.42□□□□□ -1.7
CHD1YER164W PTP3P40048 928 aa4.42□□□□□ -1.7
CHD1YER164W FRK1Q03002 865 aaPredicted RBP4.42□□□□□ -1.7
CHD1YER164W SLA1P32790 1244 aa4.42□□□□□ -1.7
CHD1YER164W ADE16P54113 591 aaKnown RBP4.42□□□□□ -1.7
CHD1YER164W SPT2P06843 333 aaPredicted RBP4.42□□□□□ -1.7
CHD1YER164W MFT1P33441 392 aaKnown RBP4.42□□□□□ -1.7
CHD1YER164W TCD1P38756 429 aa4.42□□□□□ -1.7
CHD1YER164W YNL050CP53952 270 aa4.42□□□□□ -1.7
CHD1YER164W RAD4P14736 754 aa4.41□□□□□ -1.7
CHD1YER164W CLB1P24868 471 aa4.41□□□□□ -1.7
CHD1YER164W IME2P32581 645 aa4.41□□□□□ -1.7
CHD1YER164W SMC3P47037 1230 aa4.41□□□□□ -1.7
CHD1YER164W ECM16Q04217 1267 aaKnown RBP4.41□□□□□ -1.7
CHD1YER164W YFR006WP43590 535 aa4.41□□□□□ -1.7
CHD1YER164W ITC1P53125 1264 aa4.41□□□□□ -1.7
CHD1YER164W RMD1Q03441 430 aa4.41□□□□□ -1.7
CHD1YER164W TCB1Q12466 1186 aa4.41□□□□□ -1.7
CHD1YER164W HXT10P43581 546 aa4.41□□□□□ -1.7
CHD1YER164W DOS2P54858 310 aa4.41□□□□□ -1.7
CHD1YER164W INP54Q08227 384 aaKnown RBP4.41□□□□□ -1.7
CHD1YER164W TUM1Q08686 304 aaKnown RBP4.41□□□□□ -1.7
CHD1YER164W RFC1P38630 861 aaKnown RBP4.4□□□□□ -1.7
CHD1YER164W YNG2P38806 282 aaKnown RBP4.4□□□□□ -1.7
CHD1YER164W DSN1P40568 576 aa4.4□□□□□ -1.7
CHD1YER164W AOS1Q06624 347 aa4.4□□□□□ -1.71
CHD1YER164W NOP8Q08287 484 aaPredicted RBP4.4□□□□□ -1.71
CHD1YER164W RLF2Q12495 606 aa4.4□□□□□ -1.71
CHD1YER164W ROX1P25042 368 aa4.4□□□□□ -1.71
CHD1YER164W VPS64Q03944 604 aa4.4□□□□□ -1.71
CHD1YER164W DEP1P31385 405 aa4.39□□□□□ -1.71
CHD1YER164W ENV9Q08651 330 aa4.39□□□□□ -1.71
CHD1YER164W URB1P34241 1764 aaKnown RBP4.39□□□□□ -1.71
CHD1YER164W SLD2P34252 453 aa4.39□□□□□ -1.71
CHD1YER164W APL2P36000 726 aaPredicted RBP4.39□□□□□ -1.71
CHD1YER164W FCP1Q03254 732 aa4.39□□□□□ -1.71
CHD1YER164W NUP133P36161 1157 aa4.39□□□□□ -1.71
CHD1YER164W RNT1Q02555 471 aa4.39□□□□□ -1.71
CHD1YER164W NUP145P49687 1317 aa4.38□□□□□ -1.71
CHD1YER164W NMD2P38798 1089 aaKnown RBP4.38□□□□□ -1.71
CHD1YER164W MSH4P40965 878 aaPredicted RBP4.38□□□□□ -1.71
CHD1YER164W HXT17P53631 564 aa4.38□□□□□ -1.71
CHD1YER164W NKP2Q06162 153 aa4.38□□□□□ -1.71
CHD1YER164W SFI1Q12369 946 aa4.38□□□□□ -1.71
CHD1YER164W OSM1P21375 501 aaKnown RBP4.38□□□□□ -1.71
CHD1YER164W YKL133CP36066 463 aa4.38□□□□□ -1.71
CHD1YER164W BRN1P38170 754 aa4.37□□□□□ -1.71
CHD1YER164W RSM25P40496 264 aa4.37□□□□□ -1.71
CHD1YER164W GIN4Q12263 1142 aa4.37□□□□□ -1.71
CHD1YER164W HXT13P39924 564 aa4.37□□□□□ -1.71
CHD1YER164W IES2P40154 320 aa4.37□□□□□ -1.71
CHD1YER164W ETT1Q08421 412 aaKnown RBP4.37□□□□□ -1.71
CHD1YER164W PSH1Q12161 406 aa4.37□□□□□ -1.71
CHD1YER164W LCD1Q04377 747 aa4.37□□□□□ -1.71
CHD1YER164W KCC4P25389 1037 aa4.36□□□□□ -1.71
CHD1YER164W PEX14P53112 341 aa4.36□□□□□ -1.71
CHD1YER164W COBP00163 385 aa4.36□□□□□ -1.71
CHD1YER164W HSP82P02829 709 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms