RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeastyeast

Gene RIB3, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIB3YDR487C HSP104P31539 908 aaKnown RBP12.48□□□□□ -0.41
RIB3YDR487C DSD1P53095 428 aa12.48□□□□□ -0.41
RIB3YDR487C BUG1Q12191 341 aa12.48□□□□□ -0.41
RIB3YDR487C SSA1P10591 642 aaKnown RBP12.47□□□□□ -0.41
RIB3YDR487C YBP2P53169 641 aa12.46□□□□□ -0.41
RIB3YDR487C GRE2Q12068 342 aaKnown RBP12.46□□□□□ -0.41
RIB3YDR487C RAD4P14736 754 aa12.44□□□□□ -0.42
RIB3YDR487C SNF2P22082 1703 aa12.43□□□□□ -0.42
RIB3YDR487C TRK1P12685 1235 aa12.43□□□□□ -0.42
RIB3YDR487C CTF4Q01454 927 aa12.43□□□□□ -0.42
RIB3YDR487C AKL1P38080 1108 aaKnown RBP12.42□□□□□ -0.42
RIB3YDR487C NST1P53935 1240 aa12.41□□□□□ -0.42
RIB3YDR487C NUP145P49687 1317 aa12.4□□□□□ -0.42
RIB3YDR487C UTP22P53254 1237 aaPredicted RBP12.4□□□□□ -0.42
RIB3YDR487C HPC2Q01448 625 aa12.4□□□□□ -0.42
RIB3YDR487C SAP155P43612 1002 aa12.39□□□□□ -0.43
RIB3YDR487C TUM1Q08686 304 aaKnown RBP12.39□□□□□ -0.43
RIB3YDR487C AOS1Q06624 347 aa12.38□□□□□ -0.43
RIB3YDR487C TOS1P38288 455 aa12.36□□□□□ -0.43
RIB3YDR487C EAF6P47128 113 aa12.35□□□□□ -0.43
RIB3YDR487C PSD2P53037 1138 aaKnown RBP12.33□□□□□ -0.44
RIB3YDR487C RMT2Q03305 412 aa12.33□□□□□ -0.44
RIB3YDR487C KCC4P25389 1037 aa12.32□□□□□ -0.44
RIB3YDR487C NTH2P35172 780 aa12.32□□□□□ -0.44
RIB3YDR487C MSN5P52918 1224 aa12.32□□□□□ -0.44
RIB3YDR487C RRT14P40470 206 aa12.31□□□□□ -0.44
RIB3YDR487C BUD27P43573 796 aaKnown RBP RIP-Chip data12.31□□□□□ -0.44not detected
RIB3YDR487C RIX7Q07844 837 aaKnown RBP12.3□□□□□ -0.44
RIB3YDR487C NYV1Q12255 253 aa12.29□□□□□ -0.44
RIB3YDR487C ALE1Q08548 619 aa12.28□□□□□ -0.44
RIB3YDR487C CTI6Q08923 506 aa12.28□□□□□ -0.44
RIB3YDR487C NOP53Q12080 455 aaKnown RBP12.28□□□□□ -0.44
RIB3YDR487C TEA1P47988 759 aa12.27□□□□□ -0.45
RIB3YDR487C RRP46P53256 223 aaPredicted RBP12.27□□□□□ -0.45
RIB3YDR487C CTT1P06115 562 aa12.26□□□□□ -0.45
RIB3YDR487C MDG1P53885 366 aa12.26□□□□□ -0.45
RIB3YDR487C RIM15P43565 1770 aa12.25□□□□□ -0.45
RIB3YDR487C SER1P33330 395 aaKnown RBP12.25□□□□□ -0.45
RIB3YDR487C RTR1P40084 226 aaPredicted RBP12.24□□□□□ -0.45
RIB3YDR487C UGA3P26370 528 aa12.23□□□□□ -0.45
RIB3YDR487C YKL222CP35995 705 aa12.23□□□□□ -0.45
RIB3YDR487C YER156CP40093 338 aaKnown RBP12.23□□□□□ -0.45
RIB3YDR487C CWH41P53008 833 aa12.23□□□□□ -0.45
RIB3YDR487C NSE3Q05541 303 aa12.23□□□□□ -0.45
RIB3YDR487C LPD1P09624 499 aaKnown RBP12.22□□□□□ -0.45
RIB3YDR487C YFR016CP43597 1233 aaKnown RBP12.22□□□□□ -0.45
RIB3YDR487C YNL050CP53952 270 aa12.22□□□□□ -0.45
RIB3YDR487C PHM7Q12252 991 aa12.22□□□□□ -0.45
RIB3YDR487C ERT1P38140 529 aa12.2□□□□□ -0.46
RIB3YDR487C YGL082WP53155 381 aa12.2□□□□□ -0.46
RIB3YDR487C SSP2Q08646 371 aa12.2□□□□□ -0.46
RIB3YDR487C PRD1P25375 712 aa12.19□□□□□ -0.46
RIB3YDR487C ZDS1P50111 915 aaKnown RBP12.18□□□□□ -0.46
RIB3YDR487C KIN4Q01919 800 aa12.18□□□□□ -0.46
RIB3YDR487C SQS1P53866 767 aaKnown RBP12.16□□□□□ -0.46
RIB3YDR487C RAT1Q02792 1006 aaKnown RBP12.16□□□□□ -0.46
RIB3YDR487C PFF1P38244 976 aa12.15□□□□□ -0.46
RIB3YDR487C IOC4Q04213 475 aa12.14□□□□□ -0.47
RIB3YDR487C MAM1P40065 302 aa12.13□□□□□ -0.47
RIB3YDR487C IRC3Q06683 689 aa12.13□□□□□ -0.47
RIB3YDR487C BDF2Q07442 638 aa12.12□□□□□ -0.47
RIB3YDR487C BMS1Q08965 1183 aaKnown RBP12.12□□□□□ -0.47
RIB3YDR487C SMY1P32364 656 aaKnown RBP12.11□□□□□ -0.47
RIB3YDR487C YBR287WP38355 427 aa12.11□□□□□ -0.47
RIB3YDR487C MPP10P47083 593 aaKnown RBP12.11□□□□□ -0.47
RIB3YDR487C ARG8P18544 423 aa12.1□□□□□ -0.47
RIB3YDR487C APL2P36000 726 aaPredicted RBP12.1□□□□□ -0.47
RIB3YDR487C VPS64Q03944 604 aa12.1□□□□□ -0.47
RIB3YDR487C THI22Q06490 572 aa12.1□□□□□ -0.47
RIB3YDR487C DIB1Q06819 143 aaPredicted RBP12.1□□□□□ -0.47
RIB3YDR487C COQ4O13525 335 aa12.09□□□□□ -0.47
RIB3YDR487C ZDS2P54786 942 aa12.08□□□□□ -0.48
RIB3YDR487C TOP1P04786 769 aa12.07□□□□□ -0.48
RIB3YDR487C DCD1P06773 312 aa12.07□□□□□ -0.48
RIB3YDR487C GYP7P48365 746 aa12.07□□□□□ -0.48
RIB3YDR487C ERO1Q03103 563 aa12.07□□□□□ -0.48
RIB3YDR487C YPR204WQ08995 1032 aa12.07□□□□□ -0.48
RIB3YDR487C CAF20P12962 161 aaKnown RBP12.06□□□□□ -0.48
RIB3YDR487C YDL144CQ07589 356 aa12.06□□□□□ -0.48
RIB3YDR487C RTT109Q07794 436 aa12.06□□□□□ -0.48
RIB3YDR487C LYS2P07702 1392 aa12.05□□□□□ -0.48
RIB3YDR487C SIT4P20604 311 aa12.04□□□□□ -0.48
RIB3YDR487C ICL1P28240 557 aaPredicted RBP12.04□□□□□ -0.48
RIB3YDR487C FPK1P53739 893 aa12.04□□□□□ -0.48
RIB3YDR487C TPD3P31383 635 aa12.03□□□□□ -0.48
RIB3YDR487C YOL057WQ08225 711 aa12.03□□□□□ -0.48
RIB3YDR487C HAT1Q12341 374 aa12.03□□□□□ -0.48
RIB3YDR487C YKU70P32807 602 aa12.02□□□□□ -0.49
RIB3YDR487C PKH1Q03407 766 aa12.02□□□□□ -0.49
RIB3YDR487C SLI15P38283 698 aa12.01□□□□□ -0.49
RIB3YDR487C RPN1P38764 993 aaKnown RBP12.01□□□□□ -0.49
RIB3YDR487C SAS4Q04003 481 aa12□□□□□ -0.49
RIB3YDR487C RPS9BP05755 195 aaKnown RBP11.99□□□□□ -0.49
RIB3YDR487C FRD1P32614 470 aaKnown RBP11.99□□□□□ -0.49
RIB3YDR487C DNM1P54861 757 aa11.99□□□□□ -0.49
RIB3YDR487C SYF1Q04048 859 aaPredicted RBP11.99□□□□□ -0.49
RIB3YDR487C GRX6Q12438 231 aa11.99□□□□□ -0.49
RIB3YDR487C SHC1P39000 512 aa11.98□□□□□ -0.49
RIB3YDR487C PEX21P50091 288 aa11.98□□□□□ -0.49
RIB3YDR487C SSK22P25390 1331 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms