RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C ROM1P53046 1155 aa7.59□□□□□ -1.2
VPS72YDR485C NSE3Q05541 303 aa7.59□□□□□ -1.2
VPS72YDR485C SAM3Q08986 587 aa7.59□□□□□ -1.2
VPS72YDR485C QDR1P40475 563 aa7.58□□□□□ -1.2
VPS72YDR485C SPR28Q04921 423 aa7.58□□□□□ -1.2
VPS72YDR485C SSB1P11484 613 aaKnown RBP7.57□□□□□ -1.2
VPS72YDR485C SSB2P40150 613 aaKnown RBP7.57□□□□□ -1.2
VPS72YDR485C CSC1Q06538 782 aa7.57□□□□□ -1.2
VPS72YDR485C PIN2Q12057 282 aa7.57□□□□□ -1.2
VPS72YDR485C SLY41P22215 453 aa7.57□□□□□ -1.2
VPS72YDR485C ACF4P47129 309 aa7.56□□□□□ -1.2
VPS72YDR485C ACS2P52910 683 aaKnown RBP7.56□□□□□ -1.2
VPS72YDR485C GPI13Q07830 1017 aa7.56□□□□□ -1.2
VPS72YDR485C MCM2P29469 868 aa7.55□□□□□ -1.2
VPS72YDR485C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2 RIP-Chip
VPS72YDR485C PBP2P38151 413 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
VPS72YDR485C GLO3P38682 493 aaKnown RBP7.55□□□□□ -1.2
VPS72YDR485C YOL057WQ08225 711 aa7.55□□□□□ -1.2
VPS72YDR485C TRM1P15565 570 aaKnown RBP7.54□□□□□ -1.2
VPS72YDR485C NSR1P27476 414 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
VPS72YDR485C TAT2P38967 592 aa7.54□□□□□ -1.2
VPS72YDR485C TPM2P40414 161 aa7.54□□□□□ -1.2
VPS72YDR485C EMP47P43555 445 aa7.54□□□□□ -1.2
VPS72YDR485C MTO1P53070 669 aa7.54□□□□□ -1.2
VPS72YDR485C PHO87P25360 923 aa7.54□□□□□ -1.2
VPS72YDR485C SLI15P38283 698 aa7.54□□□□□ -1.2
VPS72YDR485C ZDS1P50111 915 aaKnown RBP7.54□□□□□ -1.2
VPS72YDR485C MDG1P53885 366 aa7.54□□□□□ -1.2
VPS72YDR485C ENV9Q08651 330 aa7.53□□□□□ -1.2
VPS72YDR485C MPH3P0CE00 602 aa7.52□□□□□ -1.21
VPS72YDR485C MIP1P15801 1254 aa7.52□□□□□ -1.21
VPS72YDR485C FUR4P05316 633 aaKnown RBP7.52□□□□□ -1.21
VPS72YDR485C SRS2P12954 1174 aa7.52□□□□□ -1.21
VPS72YDR485C POB3Q04636 552 aaKnown RBP7.52□□□□□ -1.21
VPS72YDR485C BDF2Q07442 638 aa7.52□□□□□ -1.21
VPS72YDR485C GYP5Q12344 894 aa7.52□□□□□ -1.21
VPS72YDR485C AI4P03878 556 aa7.51□□□□□ -1.21
VPS72YDR485C YJR142WP47173 342 aa7.51□□□□□ -1.21
VPS72YDR485C PHO4P07270 312 aaKnown RBP7.5□□□□□ -1.21
VPS72YDR485C STI1P15705 589 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
VPS72YDR485C CDC73Q06697 393 aa7.5□□□□□ -1.21
VPS72YDR485C PUN1Q06991 263 aa7.5□□□□□ -1.21
VPS72YDR485C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
VPS72YDR485C TFB4Q12004 338 aa7.49□□□□□ -1.21
VPS72YDR485C YJL049WP47048 450 aa7.49□□□□□ -1.21
VPS72YDR485C YNL115CP53925 644 aa7.49□□□□□ -1.21
VPS72YDR485C HAP4P14064 554 aa7.48□□□□□ -1.21
VPS72YDR485C ENP1P38333 483 aaKnown RBP7.48□□□□□ -1.21
VPS72YDR485C APL6P46682 809 aa7.48□□□□□ -1.21
VPS72YDR485C YOL036WQ08206 761 aa7.48□□□□□ -1.21
VPS72YDR485C TUM1Q08686 304 aaKnown RBP7.48□□□□□ -1.21
VPS72YDR485C CDC53Q12018 815 aaKnown RBP7.48□□□□□ -1.21
VPS72YDR485C RPT1P33299 467 aaKnown RBP7.48□□□□□ -1.21
VPS72YDR485C BOI1P38041 980 aaKnown RBP7.48□□□□□ -1.21
VPS72YDR485C NAB3P38996 802 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
VPS72YDR485C MNN1P39106 762 aa7.48□□□□□ -1.21
VPS72YDR485C MAD1P40957 749 aa7.48□□□□□ -1.21
VPS72YDR485C DAK2P43550 591 aa7.47□□□□□ -1.21
VPS72YDR485C SUV3P32580 737 aa7.47□□□□□ -1.21
VPS72YDR485C YAP5P40574 245 aa7.47□□□□□ -1.21
VPS72YDR485C PPM2Q08282 695 aa7.47□□□□□ -1.21
VPS72YDR485C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.46□□□□□ -1.21not detected
VPS72YDR485C UBP12P39538 1254 aa7.46□□□□□ -1.21
VPS72YDR485C WRS1Q12109 432 aaKnown RBP7.46□□□□□ -1.21
VPS72YDR485C LSO1Q3E827 93 aa7.46□□□□□ -1.21
VPS72YDR485C RTF1P53064 558 aa7.46□□□□□ -1.22
VPS72YDR485C YPR084WQ06821 456 aa7.46□□□□□ -1.22
VPS72YDR485C DCW1P36091 449 aa7.45□□□□□ -1.22
VPS72YDR485C PUS6P53294 404 aa7.45□□□□□ -1.22
VPS72YDR485C FRA1Q07825 749 aa7.45□□□□□ -1.22
VPS72YDR485C TRS120Q04183 1289 aa7.44□□□□□ -1.22
VPS72YDR485C ERF2Q06551 359 aa7.44□□□□□ -1.22
VPS72YDR485C ESF1Q06344 628 aaKnown RBP7.43□□□□□ -1.22
VPS72YDR485C GAS4Q08271 471 aa7.43□□□□□ -1.22
VPS72YDR485C YGR161W-CQ3E744 92 aa7.43□□□□□ -1.22
VPS72YDR485C TSC13Q99190 310 aa7.43□□□□□ -1.22
VPS72YDR485C RPS26AP39938 119 aaKnown RBP7.42□□□□□ -1.22
VPS72YDR485C RPS26BP39939 119 aaKnown RBP7.42□□□□□ -1.22
VPS72YDR485C HUL5P53119 910 aa7.42□□□□□ -1.22
VPS72YDR485C TUB4P53378 473 aa7.42□□□□□ -1.22
VPS72YDR485C RMD1Q03441 430 aa7.42□□□□□ -1.22
VPS72YDR485C TOS4Q06266 489 aa7.42□□□□□ -1.22
VPS72YDR485C SOH1P38633 127 aa7.42□□□□□ -1.22
VPS72YDR485C MET6P05694 767 aaKnown RBP7.41□□□□□ -1.22
VPS72YDR485C CLN2P20438 545 aa7.41□□□□□ -1.22
VPS72YDR485C PDI1P17967 522 aaKnown RBP7.41□□□□□ -1.22
VPS72YDR485C GRX1P25373 110 aaKnown RBP7.41□□□□□ -1.22
VPS72YDR485C DAN4P47179 1161 aa7.41□□□□□ -1.22
VPS72YDR485C YGL081WP53156 320 aa7.41□□□□□ -1.22
VPS72YDR485C RTT106P40161 455 aa7.4□□□□□ -1.22
VPS72YDR485C YDL121CQ07541 149 aa7.4□□□□□ -1.22
VPS72YDR485C RPA135P22138 1203 aaKnown RBP7.4□□□□□ -1.23
VPS72YDR485C YEN1P40028 759 aa7.4□□□□□ -1.23
VPS72YDR485C NUP82P40368 713 aa7.4□□□□□ -1.23
VPS72YDR485C KEX2P13134 814 aa7.39□□□□□ -1.23
VPS72YDR485C FIG4P42837 879 aa7.39□□□□□ -1.23
VPS72YDR485C UTP13Q05946 817 aaKnown RBP7.39□□□□□ -1.23
VPS72YDR485C CYC8P14922 966 aa7.38□□□□□ -1.23
VPS72YDR485C TIM23P32897 222 aa7.38□□□□□ -1.23
VPS72YDR485C YOR131CQ12486 218 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms