RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C DRS1P32892 752 aaKnown RBP13.23□□□□□ -0.29
VPS72YDR485C TFA1P36100 482 aa12.18□□□□□ -0.46
VPS72YDR485C MTC1P47018 478 aaKnown RBP11.98□□□□□ -0.49
VPS72YDR485C BFR2Q06631 534 aaKnown RBP11.96□□□□□ -0.5
VPS72YDR485C RQC2Q12532 1038 aaKnown RBP11.32□□□□□ -0.6
VPS72YDR485C AVT3P36062 692 aa11.15□□□□□ -0.62
VPS72YDR485C TAF7Q05021 590 aa10.94□□□□□ -0.66
VPS72YDR485C DIP2Q12220 943 aaPredicted RBP10.87□□□□□ -0.67
VPS72YDR485C DMA1P38823 416 aa10.51□□□□□ -0.73
VPS72YDR485C LEO1P38439 464 aa10.19□□□□□ -0.78
VPS72YDR485C RSE1Q04693 1361 aaKnown RBP9.85□□□□□ -0.83
VPS72YDR485C PTP3P40048 928 aa9.81□□□□□ -0.84
VPS72YDR485C LEU3P08638 886 aa9.67□□□□□ -0.86
VPS72YDR485C SAS10Q12136 610 aaPredicted RBP9.59□□□□□ -0.87
VPS72YDR485C SSP1P38871 571 aa9.48□□□□□ -0.89
VPS72YDR485C ABP1P15891 592 aaKnown RBP9.46□□□□□ -0.89
VPS72YDR485C DMA2P53924 522 aa9.46□□□□□ -0.9
VPS72YDR485C RPL17AP05740 184 aaKnown RBP9.44□□□□□ -0.9
VPS72YDR485C RPL17BP46990 184 aaKnown RBP9.44□□□□□ -0.9
VPS72YDR485C RIM101P33400 625 aa9.41□□□□□ -0.9
VPS72YDR485C ISW2Q08773 1120 aa9.35□□□□□ -0.91
VPS72YDR485C SPT21P35209 758 aa9.31□□□□□ -0.92
VPS72YDR485C RPG1P38249 964 aaKnown RBP9.29□□□□□ -0.92
VPS72YDR485C RPN1P38764 993 aaKnown RBP9.24□□□□□ -0.93
VPS72YDR485C OXP1P28273 1286 aa9.22□□□□□ -0.93
VPS72YDR485C RLF2Q12495 606 aa9.19□□□□□ -0.94
VPS72YDR485C IFH1P39520 1085 aa9.16□□□□□ -0.94
VPS72YDR485C YLR271WQ06152 274 aa9.15□□□□□ -0.95
VPS72YDR485C REB1P21538 810 aa9.14□□□□□ -0.95
VPS72YDR485C YAH1Q12184 172 aaKnown RBP9.12□□□□□ -0.95
VPS72YDR485C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
VPS72YDR485C CKB1P43639 278 aa9.04□□□□□ -0.96
VPS72YDR485C MGA2P40578 1113 aa9.01□□□□□ -0.97
VPS72YDR485C CST9Q06032 482 aa8.96□□□□□ -0.98
VPS72YDR485C PRI1P10363 409 aa8.94□□□□□ -0.98
VPS72YDR485C SPB4P25808 606 aaPredicted RBP8.89□□□□□ -0.99
VPS72YDR485C ORC1P54784 914 aaPredicted RBP8.89□□□□□ -0.99
VPS72YDR485C YIL055CP40523 627 aaKnown RBP8.87□□□□□ -0.99
VPS72YDR485C YPR148CQ06523 435 aa8.85□□□□□ -0.99
VPS72YDR485C IOC4Q04213 475 aa8.84□□□□□ -0.99
VPS72YDR485C NAP1P25293 417 aaKnown RBP8.84□□□□□ -0.99
VPS72YDR485C RSM7P47150 247 aa8.8□□□□□ -1
VPS72YDR485C VPS70P47161 811 aa8.79□□□□□ -1
VPS72YDR485C SET1P38827 1080 aaKnown RBP8.79□□□□□ -1
VPS72YDR485C KIN1P13185 1064 aa8.78□□□□□ -1
VPS72YDR485C AIM44Q99299 758 aa8.78□□□□□ -1
VPS72YDR485C RAM2P29703 316 aa8.77□□□□□ -1.01
VPS72YDR485C YML020WQ03722 664 aa8.77□□□□□ -1.01
VPS72YDR485C PSD2P53037 1138 aaKnown RBP8.76□□□□□ -1.01
VPS72YDR485C NOP8Q08287 484 aaPredicted RBP8.76□□□□□ -1.01
VPS72YDR485C DSF2P38213 736 aa8.75□□□□□ -1.01
VPS72YDR485C YKR023WP36119 530 aaKnown RBP8.74□□□□□ -1.01
VPS72YDR485C YNR021WP53723 404 aaKnown RBP8.69□□□□□ -1.02
VPS72YDR485C GUA1P38625 525 aaKnown RBP8.64□□□□□ -1.03
VPS72YDR485C PBS2P08018 668 aa8.63□□□□□ -1.03
VPS72YDR485C GLC3P32775 704 aa8.63□□□□□ -1.03
VPS72YDR485C SLX8P40072 274 aa8.61□□□□□ -1.03
VPS72YDR485C AIM7Q12156 149 aa8.61□□□□□ -1.03
VPS72YDR485C AI2P03876 854 aa8.59□□□□□ -1.03
VPS72YDR485C RCR1P38212 213 aa8.58□□□□□ -1.04
VPS72YDR485C TSR3Q12094 313 aaKnown RBP8.55□□□□□ -1.04
VPS72YDR485C HGH1P48362 394 aaKnown RBP8.55□□□□□ -1.04
VPS72YDR485C SUB2Q07478 446 aaKnown RBP8.55□□□□□ -1.04
VPS72YDR485C MAM3Q12296 706 aa8.55□□□□□ -1.04
VPS72YDR485C GEF1P37020 779 aa8.54□□□□□ -1.04
VPS72YDR485C DIT2P21595 489 aa8.54□□□□□ -1.04
VPS72YDR485C NUP42P49686 430 aaKnown RBP8.54□□□□□ -1.04
VPS72YDR485C AAD16Q02895 342 aa8.54□□□□□ -1.04
VPS72YDR485C SSA1P10591 642 aaKnown RBP8.53□□□□□ -1.04
VPS72YDR485C TFC8Q12308 588 aa8.52□□□□□ -1.05
VPS72YDR485C HOP09932 586 aa8.51□□□□□ -1.05
VPS72YDR485C DCD1P06773 312 aa8.48□□□□□ -1.05
VPS72YDR485C IES2P40154 320 aa8.48□□□□□ -1.05
VPS72YDR485C HPC2Q01448 625 aa8.47□□□□□ -1.05
VPS72YDR485C MRX12P47084 519 aa8.46□□□□□ -1.06
VPS72YDR485C TFB3Q03290 321 aa8.46□□□□□ -1.06
VPS72YDR485C MAK11P20484 414 aaKnown RBP8.44□□□□□ -1.06
VPS72YDR485C PKC1P24583 1151 aa8.42□□□□□ -1.06
VPS72YDR485C MRM1P25270 412 aa8.39□□□□□ -1.07
VPS72YDR485C MAK21Q12176 1025 aaKnown RBP8.39□□□□□ -1.07
VPS72YDR485C GLN1P32288 370 aaKnown RBP8.38□□□□□ -1.07
VPS72YDR485C REF2P42073 533 aaPredicted RBP8.35□□□□□ -1.07
VPS72YDR485C NOP7P53261 605 aaKnown RBP8.35□□□□□ -1.07
VPS72YDR485C PAM1P37304 830 aaKnown RBP8.34□□□□□ -1.07
VPS72YDR485C BCH2P36122 765 aa8.34□□□□□ -1.07
VPS72YDR485C COQ8P27697 501 aa8.33□□□□□ -1.08
VPS72YDR485C BIM1P40013 344 aa8.33□□□□□ -1.08
VPS72YDR485C BBC1P47068 1157 aa8.33□□□□□ -1.08
VPS72YDR485C ATG32P40458 529 aa8.32□□□□□ -1.08
VPS72YDR485C RTG3P38165 486 aa8.32□□□□□ -1.08
VPS72YDR485C FAP1P53971 965 aa8.32□□□□□ -1.08
VPS72YDR485C ATF2P53296 535 aa8.31□□□□□ -1.08
VPS72YDR485C COX6P00427 148 aa8.28□□□□□ -1.08
VPS72YDR485C SNU71P53207 620 aaKnown RBP8.28□□□□□ -1.08
VPS72YDR485C BRL1P38770 471 aa8.27□□□□□ -1.09
VPS72YDR485C YJL007CP47080 104 aa8.27□□□□□ -1.09
VPS72YDR485C SEN54Q02825 467 aaPredicted RBP8.27□□□□□ -1.09
VPS72YDR485C SSA4P22202 642 aaKnown RBP8.26□□□□□ -1.09
VPS72YDR485C CDC27P38042 758 aa8.25□□□□□ -1.09
VPS72YDR485C ERG12P07277 443 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms