RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W CSE4P36012 229 aa5.53□□□□□ -1.52
SSF2YDR312W BRL1P38770 471 aa5.53□□□□□ -1.52
SSF2YDR312W YJR115WP47152 169 aa5.53□□□□□ -1.52
SSF2YDR312W TFB3Q03290 321 aa5.53□□□□□ -1.52
SSF2YDR312W TEC1P18412 486 aa5.52□□□□□ -1.53
SSF2YDR312W UGA3P26370 528 aa5.52□□□□□ -1.53
SSF2YDR312W RTT106P40161 455 aa5.51□□□□□ -1.53
SSF2YDR312W NAF1P53919 492 aaKnown RBP5.51□□□□□ -1.53
SSF2YDR312W ITT1Q04638 464 aa5.51□□□□□ -1.53
SSF2YDR312W MET22P32179 357 aa5.5□□□□□ -1.53
SSF2YDR312W YBL036CP38197 257 aa5.5□□□□□ -1.53
SSF2YDR312W EMW1P42842 904 aaKnown RBP5.5□□□□□ -1.53
SSF2YDR312W APP1P53933 587 aa5.5□□□□□ -1.53
SSF2YDR312W YPR084WQ06821 456 aa5.5□□□□□ -1.53
SSF2YDR312W PKC1P24583 1151 aa5.49□□□□□ -1.53
SSF2YDR312W YBL086CP38177 466 aa5.48□□□□□ -1.53
SSF2YDR312W ENV9Q08651 330 aa5.48□□□□□ -1.53
SSF2YDR312W SPT5P27692 1063 aaKnown RBP5.47□□□□□ -1.53
SSF2YDR312W GUT2P32191 649 aa5.47□□□□□ -1.53
SSF2YDR312W PTK2P47116 818 aaKnown RBP5.47□□□□□ -1.53
SSF2YDR312W YDR444WQ04093 687 aa5.46□□□□□ -1.54
SSF2YDR312W SRF1Q12516 437 aa5.46□□□□□ -1.54
SSF2YDR312W LCB5Q06147 687 aaKnown RBP5.45□□□□□ -1.54
SSF2YDR312W FRA1Q07825 749 aa5.45□□□□□ -1.54
SSF2YDR312W MKS1P34072 584 aa5.44□□□□□ -1.54
SSF2YDR312W STE20Q03497 939 aaKnown RBP5.44□□□□□ -1.54
SSF2YDR312W YDJ1P25491 409 aaKnown RBP5.43□□□□□ -1.54
SSF2YDR312W ARG82P07250 355 aa5.42□□□□□ -1.54
SSF2YDR312W BIO2P32451 375 aa5.42□□□□□ -1.54
SSF2YDR312W NUP85P46673 744 aa5.42□□□□□ -1.54
SSF2YDR312W FBP26P32604 452 aa5.42□□□□□ -1.54
SSF2YDR312W AAD14P42884 376 aa5.42□□□□□ -1.54
SSF2YDR312W MRX12P47084 519 aa5.42□□□□□ -1.54
SSF2YDR312W HGH1P48362 394 aaKnown RBP5.42□□□□□ -1.54
SSF2YDR312W MCM16Q12262 181 aa5.42□□□□□ -1.54
SSF2YDR312W EMP47P43555 445 aa5.41□□□□□ -1.54
SSF2YDR312W DFG5Q05031 458 aa5.41□□□□□ -1.54
SSF2YDR312W YLR346CQ06139 101 aa5.41□□□□□ -1.54
SSF2YDR312W ATG20Q07528 640 aa5.41□□□□□ -1.54
SSF2YDR312W SUP45P12385 437 aaKnown RBP5.4□□□□□ -1.55
SSF2YDR312W ISF1P32488 338 aa5.4□□□□□ -1.55
SSF2YDR312W YJL007CP47080 104 aa5.4□□□□□ -1.55
SSF2YDR312W DMA2P53924 522 aa5.4□□□□□ -1.55
SSF2YDR312W YNL108CP53929 270 aa5.4□□□□□ -1.55
SSF2YDR312W OPT2Q06593 877 aa5.4□□□□□ -1.55
SSF2YDR312W STE6P12866 1290 aa5.39□□□□□ -1.55
SSF2YDR312W BDS1Q08347 646 aa5.39□□□□□ -1.55
SSF2YDR312W APL6P46682 809 aa5.38□□□□□ -1.55
SSF2YDR312W YPP1P46951 817 aa5.38□□□□□ -1.55
SSF2YDR312W LSC2P53312 427 aa5.38□□□□□ -1.55
SSF2YDR312W ISU1Q03020 165 aa5.38□□□□□ -1.55
SSF2YDR312W ENO2P00925 437 aaKnown RBP5.37□□□□□ -1.55
SSF2YDR312W GLY1P37303 387 aaKnown RBP5.37□□□□□ -1.55
SSF2YDR312W MIP1P15801 1254 aa5.36□□□□□ -1.55
SSF2YDR312W DLD1P32891 587 aa5.36□□□□□ -1.55
SSF2YDR312W YJR098CP47139 656 aa5.36□□□□□ -1.55
SSF2YDR312W YDL176WQ12027 708 aa5.36□□□□□ -1.55
SSF2YDR312W BIM1P40013 344 aa5.35□□□□□ -1.55
SSF2YDR312W ISR1Q06098 443 aaKnown RBP5.35□□□□□ -1.55
SSF2YDR312W ACO2P39533 789 aa5.34□□□□□ -1.55
SSF2YDR312W ATG3P40344 310 aa5.34□□□□□ -1.55
SSF2YDR312W SCW11P53189 542 aa5.34□□□□□ -1.55
SSF2YDR312W UBP2Q01476 1272 aa5.34□□□□□ -1.55
SSF2YDR312W RPP2BP02400 110 aaKnown RBP5.33□□□□□ -1.56
SSF2YDR312W ATG32P40458 529 aa5.33□□□□□ -1.56
SSF2YDR312W RIM21P48565 533 aa5.33□□□□□ -1.56
SSF2YDR312W TY1A-BLQ12266 440 aa5.33□□□□□ -1.56
SSF2YDR312W TCB1Q12466 1186 aa5.33□□□□□ -1.56
SSF2YDR312W CAF120P53836 1060 aa5.32□□□□□ -1.56
SSF2YDR312W UTP13Q05946 817 aaKnown RBP5.32□□□□□ -1.56
SSF2YDR312W SPT2P06843 333 aaPredicted RBP5.31□□□□□ -1.56
SSF2YDR312W TIF1P10081 395 aaKnown RBP5.31□□□□□ -1.56
SSF2YDR312W SOH1P38633 127 aa5.31□□□□□ -1.56
SSF2YDR312W HAL5P38970 855 aaKnown RBP5.31□□□□□ -1.56
SSF2YDR312W DLD3P39976 496 aaKnown RBP5.3□□□□□ -1.56
SSF2YDR312W UTR2P32623 467 aa5.29□□□□□ -1.56
SSF2YDR312W RPL34BP40525 121 aaKnown RBP5.29□□□□□ -1.56
SSF2YDR312W MRX10Q05648 414 aa5.29□□□□□ -1.56
SSF2YDR312W WTM2Q12206 467 aa5.29□□□□□ -1.56
SSF2YDR312W DAT1P13483 248 aaKnown RBP5.29□□□□□ -1.56
SSF2YDR312W RDS2P19541 446 aaKnown RBP5.29□□□□□ -1.56
SSF2YDR312W RTG2P32608 588 aaKnown RBP5.29□□□□□ -1.56
SSF2YDR312W YIR007WP40566 764 aa5.29□□□□□ -1.56
SSF2YDR312W ENO1P00924 437 aaKnown RBP5.28□□□□□ -1.56
SSF2YDR312W OSH7P38755 437 aa5.28□□□□□ -1.56
SSF2YDR312W VTC4P47075 721 aa5.28□□□□□ -1.56
SSF2YDR312W MTC5Q03897 1148 aa5.28□□□□□ -1.56
SSF2YDR312W HDA3Q06623 655 aa5.28□□□□□ -1.56
SSF2YDR312W TBS1P38114 1094 aa5.27□□□□□ -1.57
SSF2YDR312W DAL1P32375 460 aa5.26□□□□□ -1.57
SSF2YDR312W SLX8P40072 274 aa5.25□□□□□ -1.57
SSF2YDR312W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
SSF2YDR312W CDC19P00549 500 aaKnown RBP5.24□□□□□ -1.57
SSF2YDR312W SSN3P39073 555 aa5.24□□□□□ -1.57
SSF2YDR312W ROG3P43602 733 aa5.24□□□□□ -1.57
SSF2YDR312W MSN5P52918 1224 aa5.24□□□□□ -1.57
SSF2YDR312W TY1A-MR1Q04215 440 aa5.24□□□□□ -1.57
SSF2YDR312W YPR204WQ08995 1032 aa5.24□□□□□ -1.57
SSF2YDR312W PEP12P32854 288 aa5.23□□□□□ -1.57
SSF2YDR312W UTP7P40055 554 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms