RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C SAP190P36123 1033 aa5.34□□□□□ -1.55
PRP28YDR243C STR2P47164 639 aa5.34□□□□□ -1.55
PRP28YDR243C SLN1P39928 1220 aaPredicted RBP5.34□□□□□ -1.56
PRP28YDR243C ISM1P48526 1002 aa5.34□□□□□ -1.56
PRP28YDR243C RPN7Q06103 429 aaKnown RBP5.34□□□□□ -1.56
PRP28YDR243C PET111P08468 800 aa5.33□□□□□ -1.56
PRP28YDR243C CLB5P30283 435 aa5.33□□□□□ -1.56
PRP28YDR243C DSN1P40568 576 aa5.33□□□□□ -1.56
PRP28YDR243C SSA1P10591 642 aaKnown RBP5.32□□□□□ -1.56
PRP28YDR243C SSA2P10592 639 aaKnown RBP5.32□□□□□ -1.56
PRP28YDR243C SRP54P20424 541 aaKnown RBP5.32□□□□□ -1.56
PRP28YDR243C GLC3P32775 704 aa5.32□□□□□ -1.56
PRP28YDR243C YIR014WP40570 242 aa5.32□□□□□ -1.56
PRP28YDR243C YPP1P46951 817 aa5.32□□□□□ -1.56
PRP28YDR243C BMS1Q08965 1183 aaKnown RBP5.32□□□□□ -1.56
PRP28YDR243C MMS1Q06211 1407 aa5.32□□□□□ -1.56
PRP28YDR243C CHZ1P40019 153 aaPredicted RBP5.32□□□□□ -1.56
PRP28YDR243C TEA1P47988 759 aa5.32□□□□□ -1.56
PRP28YDR243C GIN4Q12263 1142 aa5.32□□□□□ -1.56
PRP28YDR243C MON2P48563 1636 aaPredicted RBP5.31□□□□□ -1.56
PRP28YDR243C PEP1P32319 1579 aa5.31□□□□□ -1.56
PRP28YDR243C SRB8P25648 1427 aa5.31□□□□□ -1.56
PRP28YDR243C IKI3Q06706 1349 aaKnown RBP5.31□□□□□ -1.56
PRP28YDR243C NOT3P06102 836 aaKnown RBP5.31□□□□□ -1.56
PRP28YDR243C APL5Q08951 932 aaKnown RBP5.31□□□□□ -1.56
PRP28YDR243C ERG12P07277 443 aa5.3□□□□□ -1.56
PRP28YDR243C SUB1P54000 292 aaKnown RBP5.3□□□□□ -1.56
PRP28YDR243C NPL4P33755 580 aa5.29□□□□□ -1.56
PRP28YDR243C RRP14P36080 434 aaKnown RBP5.29□□□□□ -1.56
PRP28YDR243C MED8P38304 223 aa5.29□□□□□ -1.56
PRP28YDR243C ATF2P53296 535 aa5.29□□□□□ -1.56
PRP28YDR243C BUD4P47136 1447 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-DR4O74302 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-HP0C2I4 478 aaKnown RBP5.29□□□□□ -1.56
PRP28YDR243C TY1A-AP0CX57 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-PR1P0CX58 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-ORP0CX59 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-PR2P0CX60 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-DR5P0CX65 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-ER2P0CX66 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-GR3P0CX67 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-LR1P0CX68 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-MR2P0CX69 440 aa5.29□□□□□ -1.56
PRP28YDR243C PEA2P40091 420 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-JR2P47099 440 aa5.29□□□□□ -1.56
PRP28YDR243C NIS1P53939 407 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-DR1Q03856 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-ML1Q04706 440 aaKnown RBP5.29□□□□□ -1.56
PRP28YDR243C RRP15Q06511 250 aaPredicted RBP5.29□□□□□ -1.56
PRP28YDR243C TY1A-BRQ12217 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-NL2Q12470 440 aa5.29□□□□□ -1.56
PRP28YDR243C TY1A-GR2Q12485 440 aa5.29□□□□□ -1.56
PRP28YDR243C SEC2P17065 759 aa5.28□□□□□ -1.56
PRP28YDR243C SIT4P20604 311 aa5.28□□□□□ -1.56
PRP28YDR243C RAD51P25454 400 aa5.28□□□□□ -1.56
PRP28YDR243C RSC8P43609 557 aaKnown RBP5.28□□□□□ -1.56
PRP28YDR243C MTC5Q03897 1148 aa5.28□□□□□ -1.56
PRP28YDR243C ERF2Q06551 359 aa5.28□□□□□ -1.56
PRP28YDR243C AIM7Q12156 149 aa5.28□□□□□ -1.56
PRP28YDR243C TRM732Q03496 1420 aa5.28□□□□□ -1.56
PRP28YDR243C GCD11P32481 527 aaKnown RBP5.27□□□□□ -1.57
PRP28YDR243C ECM1P39715 212 aa5.27□□□□□ -1.57
PRP28YDR243C MPP10P47083 593 aaKnown RBP5.27□□□□□ -1.57
PRP28YDR243C EDE1P34216 1381 aa5.27□□□□□ -1.57
PRP28YDR243C TY1B-AO13527 1196 aaKnown RBP5.27□□□□□ -1.57
PRP28YDR243C KEX2P13134 814 aa5.27□□□□□ -1.57
PRP28YDR243C VPS72Q03388 795 aa5.27□□□□□ -1.57
PRP28YDR243C ERV41Q04651 352 aa5.27□□□□□ -1.57
PRP28YDR243C YLL054CQ12244 843 aa5.27□□□□□ -1.57
PRP28YDR243C YLR419WQ06698 1435 aaKnown RBP5.26□□□□□ -1.57
PRP28YDR243C MCM1P11746 286 aa5.26□□□□□ -1.57
PRP28YDR243C CDC11P32458 415 aa5.26□□□□□ -1.57
PRP28YDR243C SWI3P32591 825 aa5.26□□□□□ -1.57
PRP28YDR243C AIR1P40507 360 aaKnown RBP5.26□□□□□ -1.57
PRP28YDR243C CST6P40535 587 aa5.26□□□□□ -1.57
PRP28YDR243C ALD3P54114 506 aa5.26□□□□□ -1.57
PRP28YDR243C ORC1P54784 914 aaPredicted RBP5.26□□□□□ -1.57
PRP28YDR243C YVC1Q12324 675 aa5.26□□□□□ -1.57
PRP28YDR243C MYO4P32492 1471 aa5.25□□□□□ -1.57
PRP28YDR243C SUP35P05453 685 aaKnown RBP5.25□□□□□ -1.57
PRP28YDR243C LEM3P42838 414 aa5.25□□□□□ -1.57
PRP28YDR243C FPK1P53739 893 aa5.25□□□□□ -1.57
PRP28YDR243C DEP1P31385 405 aa5.24□□□□□ -1.57
PRP28YDR243C VID30P53076 958 aa5.24□□□□□ -1.57
PRP28YDR243C LAM6Q08001 693 aa5.24□□□□□ -1.57
PRP28YDR243C RPC82P32349 654 aa5.24□□□□□ -1.57
PRP28YDR243C KNS1P32350 737 aaPredicted RBP5.24□□□□□ -1.57
PRP28YDR243C DJP1P40564 432 aa5.24□□□□□ -1.57
PRP28YDR243C RTF1P53064 558 aa5.24□□□□□ -1.57
PRP28YDR243C PAP2P53632 584 aaKnown RBP5.24□□□□□ -1.57
PRP28YDR243C YNL115CP53925 644 aa5.24□□□□□ -1.57
PRP28YDR243C YPK9Q12697 1472 aa5.23□□□□□ -1.57
PRP28YDR243C CIN4P39110 191 aa5.23□□□□□ -1.57
PRP28YDR243C CLA4P48562 842 aa5.23□□□□□ -1.57
PRP28YDR243C YMR124WP39523 943 aaKnown RBP5.22□□□□□ -1.57
PRP28YDR243C AIM20P40451 204 aa5.22□□□□□ -1.57
PRP28YDR243C HSC82P15108 705 aaKnown RBP5.21□□□□□ -1.57
PRP28YDR243C CLB1P24868 471 aa5.21□□□□□ -1.57
PRP28YDR243C MSP1P28737 362 aa5.21□□□□□ -1.57
PRP28YDR243C SEC9P40357 651 aa5.21□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms