RNA–Protein interactions for RNA: YCR098C

GIT1, Transcript of Plasma membrane permease, yeast

Gene GIT1, Length 1,557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIT1	YCR098C	CDC3	P32457	520 aa	Known RBP	7.74	□□□□□ -1.17
GIT1	YCR098C	VPS29	P38759	282 aa		7.74	□□□□□ -1.17
GIT1	YCR098C	RIA1	P53893	1110 aa		7.74	□□□□□ -1.17
GIT1	YCR098C	GLN1	P32288	370 aa	Known RBP	7.73	□□□□□ -1.17
GIT1	YCR098C	TGL3	P40308	642 aa		7.73	□□□□□ -1.17
GIT1	YCR098C	ATG32	P40458	529 aa		7.73	□□□□□ -1.17
GIT1	YCR098C	UBP14	P38237	781 aa	Known RBP	7.71	□□□□□ -1.17
GIT1	YCR098C	SNF2	P22082	1703 aa		7.71	□□□□□ -1.18
GIT1	YCR098C	CHZ1	P40019	153 aa	Predicted RBP	7.71	□□□□□ -1.18
GIT1	YCR098C	YIL177C	P40434	1758 aa		7.7	□□□□□ -1.18
GIT1	YCR098C	YJL225C	P40889	1758 aa		7.7	□□□□□ -1.18
GIT1	YCR098C	PSE1	P32337	1089 aa	Known RBP	7.69	□□□□□ -1.18
GIT1	YCR098C	FKH1	P40466	484 aa		7.69	□□□□□ -1.18
GIT1	YCR098C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.69	□□□□□ -1.18	not detected
GIT1	YCR098C	TIF1	P10081	395 aa	Known RBP	7.68	□□□□□ -1.18
GIT1	YCR098C	PSK1	P31374	1356 aa		7.68	□□□□□ -1.18
GIT1	YCR098C	PPH3	P32345	308 aa		7.67	□□□□□ -1.18
GIT1	YCR098C	EDS1	P38073	919 aa		7.67	□□□□□ -1.18
GIT1	YCR098C	YNR029C	P53729	429 aa	Known RBP	7.67	□□□□□ -1.18
GIT1	YCR098C	RCM1	P53972	490 aa		7.67	□□□□□ -1.18
GIT1	YCR098C	PAM1	P37304	830 aa	Known RBP	7.67	□□□□□ -1.18
GIT1	YCR098C	SSF1	P38789	453 aa	Predicted RBP	7.67	□□□□□ -1.18
GIT1	YCR098C	ASF1	P32447	279 aa		7.66	□□□□□ -1.18
GIT1	YCR098C	KIC1	P38692	1080 aa		7.66	□□□□□ -1.18
GIT1	YCR098C	CPS1	P27614	576 aa		7.65	□□□□□ -1.18
GIT1	YCR098C	SCT1	P32784	759 aa		7.65	□□□□□ -1.18
GIT1	YCR098C	RRN6	P32786	894 aa		7.65	□□□□□ -1.18
GIT1	YCR098C	YBL036C	P38197	257 aa		7.65	□□□□□ -1.18
GIT1	YCR098C	PRS1	P32895	427 aa	Known RBP	7.64	□□□□□ -1.19
GIT1	YCR098C	TTI1	P36097	1038 aa		7.64	□□□□□ -1.19
GIT1	YCR098C	RRP5	Q05022	1729 aa	Known RBP	7.63	□□□□□ -1.19
GIT1	YCR098C	YEF3	P16521	1044 aa	Known RBP	7.63	□□□□□ -1.19
GIT1	YCR098C	PTC3	P34221	468 aa	Known RBP	7.63	□□□□□ -1.19
GIT1	YCR098C	SIS2	P36024	562 aa		7.63	□□□□□ -1.19
GIT1	YCR098C	TRK1	P12685	1235 aa		7.62	□□□□□ -1.19
GIT1	YCR098C	RTG2	P32608	588 aa	Known RBP	7.62	□□□□□ -1.19
GIT1	YCR098C	YPR204W	Q08995	1032 aa		7.62	□□□□□ -1.19
GIT1	YCR098C	CSE4	P36012	229 aa		7.61	□□□□□ -1.19
GIT1	YCR098C	SEN54	Q02825	467 aa	Predicted RBP	7.61	□□□□□ -1.19
GIT1	YCR098C	YDR090C	Q03193	310 aa		7.61	□□□□□ -1.19
GIT1	YCR098C	TEA1	P47988	759 aa		7.6	□□□□□ -1.19
GIT1	YCR098C	URB1	P34241	1764 aa	Known RBP	7.6	□□□□□ -1.19
GIT1	YCR098C	FKS3	Q04952	1785 aa		7.59	□□□□□ -1.19
GIT1	YCR098C	TOP1	P04786	769 aa		7.59	□□□□□ -1.19
GIT1	YCR098C	VHR2	P40041	505 aa		7.59	□□□□□ -1.19
GIT1	YCR098C	NOB1	Q08444	459 aa	Known RBP	7.59	□□□□□ -1.19
GIT1	YCR098C	YRF1-2	P40105	1681 aa		7.59	□□□□□ -1.2
GIT1	YCR098C	STS1	P38637	319 aa		7.59	□□□□□ -1.2
GIT1	YCR098C	AUS1	Q08409	1394 aa		7.58	□□□□□ -1.2
GIT1	YCR098C	ERG12	P07277	443 aa		7.58	□□□□□ -1.2
GIT1	YCR098C	ADE6	P38972	1358 aa	Known RBP	7.57	□□□□□ -1.2
GIT1	YCR098C	DBP1	P24784	617 aa	Known RBP	7.57	□□□□□ -1.2
GIT1	YCR098C	STM1	P39015	273 aa	Known RBP	7.57	□□□□□ -1.2
GIT1	YCR098C	THI12	P42883	340 aa		7.57	□□□□□ -1.2
GIT1	YCR098C	THI5	P43534	340 aa		7.57	□□□□□ -1.2
GIT1	YCR098C	THI11	P47183	340 aa		7.57	□□□□□ -1.2
GIT1	YCR098C	THI13	Q07748	340 aa		7.57	□□□□□ -1.2
GIT1	YCR098C	APC1	P53886	1748 aa		7.56	□□□□□ -1.2
GIT1	YCR098C	HAT1	Q12341	374 aa		7.56	□□□□□ -1.2
GIT1	YCR098C	SEC20	P28791	383 aa		7.55	□□□□□ -1.2
GIT1	YCR098C	CLB5	P30283	435 aa		7.55	□□□□□ -1.2
GIT1	YCR098C	BRN1	P38170	754 aa		7.55	□□□□□ -1.2
GIT1	YCR098C	YMR196W	Q04336	1088 aa		7.55	□□□□□ -1.2
GIT1	YCR098C	LEU2	P04173	364 aa	Predicted RBP	7.54	□□□□□ -1.2
GIT1	YCR098C	DOS2	P54858	310 aa		7.54	□□□□□ -1.2
GIT1	YCR098C	KTR1	P27810	393 aa	Known RBP	7.54	□□□□□ -1.2
GIT1	YCR098C	BIO2	P32451	375 aa		7.54	□□□□□ -1.2
GIT1	YCR098C	YAP5	P40574	245 aa		7.54	□□□□□ -1.2
GIT1	YCR098C	RRP46	P53256	223 aa	Predicted RBP	7.54	□□□□□ -1.2
GIT1	YCR098C	MTR4	P47047	1073 aa	Known RBP	7.53	□□□□□ -1.2
GIT1	YCR098C	TAP42	Q04372	366 aa		7.53	□□□□□ -1.2
GIT1	YCR098C	YLR326W	Q06170	240 aa	Known RBP	7.53	□□□□□ -1.2
GIT1	YCR098C	HIM1	Q06674	414 aa		7.53	□□□□□ -1.2
GIT1	YCR098C	PDI1	P17967	522 aa	Known RBP	7.52	□□□□□ -1.21
GIT1	YCR098C	RAD54	P32863	898 aa		7.52	□□□□□ -1.21
GIT1	YCR098C	NOP2	P40991	618 aa	Known RBP	7.52	□□□□□ -1.21
GIT1	YCR098C	RPS24A	P0CX31	135 aa	Known RBP	7.51	□□□□□ -1.21
GIT1	YCR098C	RPS24B	P0CX32	135 aa	Known RBP	7.51	□□□□□ -1.21
GIT1	YCR098C	KAR2	P16474	682 aa	Known RBP	7.51	□□□□□ -1.21
GIT1	YCR098C	FPR4	Q06205	392 aa	Predicted RBP	7.51	□□□□□ -1.21
GIT1	YCR098C	SPT5	P27692	1063 aa	Known RBP	7.5	□□□□□ -1.21
GIT1	YCR098C	YFR006W	P43590	535 aa		7.5	□□□□□ -1.21
GIT1	YCR098C	PRP43	P53131	767 aa	Known RBP	7.5	□□□□□ -1.21
GIT1	YCR098C	YNL108C	P53929	270 aa		7.5	□□□□□ -1.21
GIT1	YCR098C	SVF1	Q05515	481 aa		7.5	□□□□□ -1.21
GIT1	YCR098C	YDL144C	Q07589	356 aa		7.5	□□□□□ -1.21
GIT1	YCR098C	PUP1	P25043	261 aa		7.5	□□□□□ -1.21
GIT1	YCR098C	MPP10	P47083	593 aa	Known RBP	7.5	□□□□□ -1.21
GIT1	YCR098C	ATH1	P48016	1211 aa		7.5	□□□□□ -1.21
GIT1	YCR098C	YOR238W	Q08634	303 aa		7.5	□□□□□ -1.21
GIT1	YCR098C	TYW1	Q08960	810 aa	Known RBP	7.5	□□□□□ -1.21
GIT1	YCR098C	SUP45	P12385	437 aa	Known RBP	7.49	□□□□□ -1.21
GIT1	YCR098C	RPP0	P05317	312 aa	Known RBP	7.48	□□□□□ -1.21
GIT1	YCR098C	GUT1	P32190	709 aa		7.48	□□□□□ -1.21
GIT1	YCR098C	OCA5	P38738	679 aa		7.48	□□□□□ -1.21
GIT1	YCR098C	VPS27	P40343	622 aa	Known RBP	7.48	□□□□□ -1.21
GIT1	YCR098C	RTF1	P53064	558 aa		7.48	□□□□□ -1.21
GIT1	YCR098C	HST2	P53686	357 aa		7.48	□□□□□ -1.21
GIT1	YCR098C	GAS4	Q08271	471 aa		7.48	□□□□□ -1.21
GIT1	YCR098C	MST1	P07236	462 aa		7.47	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms