RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C CTF4Q01454 927 aa5.94□□□□□ -1.46
ROT2YBR229C RAD50P12753 1312 aa5.94□□□□□ -1.46
ROT2YBR229C RPS19AP07280 144 aaKnown RBP5.94□□□□□ -1.46
ROT2YBR229C RPS19BP07281 144 aaPredicted RBP5.94□□□□□ -1.46
ROT2YBR229C DJP1P40564 432 aa5.94□□□□□ -1.46
ROT2YBR229C YMR196WQ04336 1088 aa5.94□□□□□ -1.46
ROT2YBR229C CSI1Q04368 295 aa5.94□□□□□ -1.46
ROT2YBR229C YNG2P38806 282 aaKnown RBP5.93□□□□□ -1.46
ROT2YBR229C SLN1P39928 1220 aaPredicted RBP5.93□□□□□ -1.46
ROT2YBR229C NKP2Q06162 153 aa5.93□□□□□ -1.46
ROT2YBR229C AOS1Q06624 347 aa5.93□□□□□ -1.46
ROT2YBR229C LYS2P07702 1392 aa5.93□□□□□ -1.46
ROT2YBR229C RLF2Q12495 606 aa5.92□□□□□ -1.46
ROT2YBR229C BMS1Q08965 1183 aaKnown RBP5.92□□□□□ -1.46
ROT2YBR229C COQ4O13525 335 aa5.92□□□□□ -1.46
ROT2YBR229C HSP104P31539 908 aaKnown RBP5.91□□□□□ -1.46
ROT2YBR229C CAB3P36076 571 aa5.91□□□□□ -1.46
ROT2YBR229C ITC1P53125 1264 aa5.91□□□□□ -1.46
ROT2YBR229C SPO1P53541 631 aa5.91□□□□□ -1.46
ROT2YBR229C GCR2Q01722 534 aa5.91□□□□□ -1.46
ROT2YBR229C UGA3P26370 528 aa5.91□□□□□ -1.46
ROT2YBR229C DLD1P32891 587 aa5.9□□□□□ -1.46
ROT2YBR229C CDC16P09798 840 aa5.9□□□□□ -1.47
ROT2YBR229C SRS2P12954 1174 aa5.9□□□□□ -1.47
ROT2YBR229C GCD7P32502 381 aaPredicted RBP5.9□□□□□ -1.47
ROT2YBR229C YBR287WP38355 427 aa5.9□□□□□ -1.47
ROT2YBR229C HGH1P48362 394 aaKnown RBP5.9□□□□□ -1.47
ROT2YBR229C NSE3Q05541 303 aa5.9□□□□□ -1.47
ROT2YBR229C NUP145P49687 1317 aa5.9□□□□□ -1.47
ROT2YBR229C ROM2P51862 1356 aaKnown RBP5.9□□□□□ -1.47
ROT2YBR229C RFC1P38630 861 aaKnown RBP5.89□□□□□ -1.47
ROT2YBR229C NMD2P38798 1089 aaKnown RBP5.89□□□□□ -1.47
ROT2YBR229C TEA1P47988 759 aa5.89□□□□□ -1.47
ROT2YBR229C ARL1P38116 183 aaKnown RBP5.89□□□□□ -1.47
ROT2YBR229C YOL057WQ08225 711 aa5.89□□□□□ -1.47
ROT2YBR229C HAP5Q02516 242 aa5.88□□□□□ -1.47
ROT2YBR229C NOT3P06102 836 aaKnown RBP5.88□□□□□ -1.47
ROT2YBR229C SLM3Q12093 417 aa5.88□□□□□ -1.47
ROT2YBR229C KCC4P25389 1037 aa5.88□□□□□ -1.47
ROT2YBR229C RAD24P32641 659 aa5.88□□□□□ -1.47
ROT2YBR229C BRN1P38170 754 aa5.88□□□□□ -1.47
ROT2YBR229C NOP8Q08287 484 aaPredicted RBP5.87□□□□□ -1.47
ROT2YBR229C PRP5P21372 849 aaPredicted RBP5.87□□□□□ -1.47
ROT2YBR229C KNS1P32350 737 aaPredicted RBP5.87□□□□□ -1.47
ROT2YBR229C EBP2P36049 427 aaKnown RBP5.87□□□□□ -1.47
ROT2YBR229C YDR306CQ06640 478 aa5.87□□□□□ -1.47
ROT2YBR229C MRP7P12687 371 aa5.86□□□□□ -1.47
ROT2YBR229C BOI2P39969 1040 aa5.86□□□□□ -1.47
ROT2YBR229C THI12P42883 340 aa5.86□□□□□ -1.47
ROT2YBR229C THI5P43534 340 aa5.86□□□□□ -1.47
ROT2YBR229C THI11P47183 340 aa5.86□□□□□ -1.47
ROT2YBR229C THI13Q07748 340 aa5.86□□□□□ -1.47
ROT2YBR229C BDH2P39713 417 aa5.85□□□□□ -1.47
ROT2YBR229C COG8Q04632 607 aa5.85□□□□□ -1.47
ROT2YBR229C DUR1,2P32528 1835 aaKnown RBP5.85□□□□□ -1.47
ROT2YBR229C RAD4P14736 754 aa5.85□□□□□ -1.47
ROT2YBR229C HXT13P39924 564 aa5.85□□□□□ -1.47
ROT2YBR229C YGR122WP53272 402 aa5.85□□□□□ -1.47
ROT2YBR229C RNR2P09938 399 aaKnown RBP5.84□□□□□ -1.47
ROT2YBR229C RCR1P38212 213 aa5.84□□□□□ -1.47
ROT2YBR229C TCB2P48231 1178 aa5.84□□□□□ -1.48
ROT2YBR229C MSB3P48566 633 aaPredicted RBP5.84□□□□□ -1.48
ROT2YBR229C PIL1P53252 339 aaKnown RBP5.84□□□□□ -1.48
ROT2YBR229C XKS1P42826 600 aa5.83□□□□□ -1.48
ROT2YBR229C NPA3P47122 385 aa5.83□□□□□ -1.48
ROT2YBR229C HXT17P53631 564 aa5.83□□□□□ -1.48
ROT2YBR229C INP54Q08227 384 aaKnown RBP5.83□□□□□ -1.48
ROT2YBR229C VAS1P07806 1104 aaKnown RBP5.82□□□□□ -1.48
ROT2YBR229C PRP45P28004 379 aaPredicted RBP5.82□□□□□ -1.48
ROT2YBR229C HYR1P40581 163 aaKnown RBP5.82□□□□□ -1.48
ROT2YBR229C YJR008WP47085 338 aa5.82□□□□□ -1.48
ROT2YBR229C HST1P53685 503 aa5.82□□□□□ -1.48
ROT2YBR229C TRL1P09880 827 aaKnown RBP5.82□□□□□ -1.48
ROT2YBR229C DNM1P54861 757 aa5.82□□□□□ -1.48
ROT2YBR229C TCB1Q12466 1186 aa5.82□□□□□ -1.48
ROT2YBR229C CST6P40535 587 aa5.81□□□□□ -1.48
ROT2YBR229C BDP1P46678 594 aa5.81□□□□□ -1.48
ROT2YBR229C SWC3P31376 625 aa5.81□□□□□ -1.48
ROT2YBR229C CIR1P42940 261 aa5.81□□□□□ -1.48
ROT2YBR229C VPS20Q04272 221 aa5.81□□□□□ -1.48
ROT2YBR229C RSF2P46974 1380 aa5.81□□□□□ -1.48
ROT2YBR229C MNN4P36044 1178 aa5.81□□□□□ -1.48
ROT2YBR229C HRQ1Q05549 1077 aa5.81□□□□□ -1.48
ROT2YBR229C AIM44Q99299 758 aa5.81□□□□□ -1.48
ROT2YBR229C PTP3P40048 928 aa5.8□□□□□ -1.48
ROT2YBR229C LCD1Q04377 747 aa5.8□□□□□ -1.48
ROT2YBR229C SWI1P09547 1314 aa5.8□□□□□ -1.48
ROT2YBR229C KEX1P09620 729 aa5.79□□□□□ -1.48
ROT2YBR229C BIK1P11709 440 aa5.79□□□□□ -1.48
ROT2YBR229C RSC1P53236 928 aa5.79□□□□□ -1.48
ROT2YBR229C KRE33P53914 1056 aaKnown RBP5.79□□□□□ -1.48
ROT2YBR229C ALE1Q08548 619 aa5.79□□□□□ -1.48
ROT2YBR229C ECM21P38167 1117 aaKnown RBP5.79□□□□□ -1.48
ROT2YBR229C SSF1P38789 453 aaPredicted RBP5.79□□□□□ -1.48
ROT2YBR229C ZDS2P54786 942 aa5.79□□□□□ -1.48
ROT2YBR229C NCB2Q92317 146 aa5.79□□□□□ -1.48
ROT2YBR229C YRF1-3P0CX14 1859 aa5.79□□□□□ -1.48
ROT2YBR229C YRF1-7P0CX15 1859 aa5.79□□□□□ -1.48
ROT2YBR229C YRF1-6P53819 1859 aa5.79□□□□□ -1.48
ROT2YBR229C RPN12P32496 274 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms