RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W TBF1Q02457 562 aa4.47□□□□□ -1.69
SWD3YBR175W YML020WQ03722 664 aa4.47□□□□□ -1.69
SWD3YBR175W MMP1Q12372 583 aa4.47□□□□□ -1.69
SWD3YBR175W SSA2P10592 639 aaKnown RBP4.46□□□□□ -1.7
SWD3YBR175W NUP85P46673 744 aa4.46□□□□□ -1.7
SWD3YBR175W CAF120P53836 1060 aa4.46□□□□□ -1.7
SWD3YBR175W YLR346CQ06139 101 aa4.46□□□□□ -1.7
SWD3YBR175W GLY1P37303 387 aaKnown RBP4.45□□□□□ -1.7
SWD3YBR175W SRF1Q12516 437 aa4.45□□□□□ -1.7
SWD3YBR175W KTR1P27810 393 aaKnown RBP4.44□□□□□ -1.7
SWD3YBR175W VAC17P25591 423 aa4.43□□□□□ -1.7
SWD3YBR175W GUA1P38625 525 aaKnown RBP4.43□□□□□ -1.7
SWD3YBR175W RSC30P38781 883 aa4.43□□□□□ -1.7
SWD3YBR175W HPC2Q01448 625 aa4.43□□□□□ -1.7
SWD3YBR175W NOP8Q08287 484 aaPredicted RBP4.43□□□□□ -1.7
SWD3YBR175W ESS1P22696 170 aa4.42□□□□□ -1.7
SWD3YBR175W ORC1P54784 914 aaPredicted RBP4.42□□□□□ -1.7
SWD3YBR175W TYW1Q08960 810 aaKnown RBP4.42□□□□□ -1.7
SWD3YBR175W YBL086CP38177 466 aa4.41□□□□□ -1.7
SWD3YBR175W TY1A-BLQ12266 440 aa4.41□□□□□ -1.7
SWD3YBR175W SSA1P10591 642 aaKnown RBP4.4□□□□□ -1.71
SWD3YBR175W NAP1P25293 417 aaKnown RBP4.4□□□□□ -1.71
SWD3YBR175W YJU3P28321 313 aa4.4□□□□□ -1.71
SWD3YBR175W TRK2P28584 889 aa4.4□□□□□ -1.71
SWD3YBR175W SLX8P40072 274 aa4.4□□□□□ -1.71
SWD3YBR175W YIR007WP40566 764 aa4.4□□□□□ -1.71
SWD3YBR175W SCW11P53189 542 aa4.4□□□□□ -1.71
SWD3YBR175W MIP1P15801 1254 aa4.39□□□□□ -1.71
SWD3YBR175W GEF1P37020 779 aa4.39□□□□□ -1.71
SWD3YBR175W AAD14P42884 376 aa4.39□□□□□ -1.71
SWD3YBR175W PKH3Q03306 898 aaPredicted RBP4.39□□□□□ -1.71
SWD3YBR175W ARG82P07250 355 aa4.38□□□□□ -1.71
SWD3YBR175W YGR035CP53222 116 aa4.38□□□□□ -1.71
SWD3YBR175W LSC2P53312 427 aa4.38□□□□□ -1.71
SWD3YBR175W MTC5Q03897 1148 aa4.38□□□□□ -1.71
SWD3YBR175W ARG8P18544 423 aa4.37□□□□□ -1.71
SWD3YBR175W EMW1P42842 904 aaKnown RBP4.37□□□□□ -1.71
SWD3YBR175W UBP2Q01476 1272 aa4.37□□□□□ -1.71
SWD3YBR175W TFB3Q03290 321 aa4.37□□□□□ -1.71
SWD3YBR175W HPF1Q05164 967 aa4.37□□□□□ -1.71
SWD3YBR175W SUB2Q07478 446 aaKnown RBP4.37□□□□□ -1.71
SWD3YBR175W RAD59Q12223 238 aa4.37□□□□□ -1.71
SWD3YBR175W BRL1P38770 471 aa4.36□□□□□ -1.71
SWD3YBR175W YJR098CP47139 656 aa4.36□□□□□ -1.71
SWD3YBR175W IOC4Q04213 475 aa4.36□□□□□ -1.71
SWD3YBR175W CSE4P36012 229 aa4.35□□□□□ -1.71
SWD3YBR175W APP1P53933 587 aa4.35□□□□□ -1.71
SWD3YBR175W ITT1Q04638 464 aa4.35□□□□□ -1.71
SWD3YBR175W DLD1P32891 587 aa4.34□□□□□ -1.71
SWD3YBR175W FIG4P42837 879 aa4.33□□□□□ -1.72
SWD3YBR175W TCB1Q12466 1186 aa4.33□□□□□ -1.72
SWD3YBR175W MAK16P10962 306 aaPredicted RBP4.32□□□□□ -1.72
SWD3YBR175W PKC1P24583 1151 aa4.32□□□□□ -1.72
SWD3YBR175W OSH7P38755 437 aa4.32□□□□□ -1.72
SWD3YBR175W NAF1P53919 492 aaKnown RBP4.32□□□□□ -1.72
SWD3YBR175W TY1A-MR1Q04215 440 aa4.32□□□□□ -1.72
SWD3YBR175W SPT5P27692 1063 aaKnown RBP4.31□□□□□ -1.72
SWD3YBR175W CCP1P00431 361 aa4.3□□□□□ -1.72
SWD3YBR175W BIM1P40013 344 aa4.3□□□□□ -1.72
SWD3YBR175W ROG3P43602 733 aa4.3□□□□□ -1.72
SWD3YBR175W NOP7P53261 605 aaKnown RBP4.3□□□□□ -1.72
SWD3YBR175W SSA4P22202 642 aaKnown RBP4.29□□□□□ -1.72
SWD3YBR175W MKS1P34072 584 aa4.29□□□□□ -1.72
SWD3YBR175W YBL036CP38197 257 aa4.29□□□□□ -1.72
SWD3YBR175W MRX12P47084 519 aa4.29□□□□□ -1.72
SWD3YBR175W DFG5Q05031 458 aa4.29□□□□□ -1.72
SWD3YBR175W YPR084WQ06821 456 aa4.29□□□□□ -1.72
SWD3YBR175W DPH6Q12429 685 aa4.29□□□□□ -1.72
SWD3YBR175W ICP55P40051 511 aa4.28□□□□□ -1.72
SWD3YBR175W ATG32P40458 529 aa4.28□□□□□ -1.72
SWD3YBR175W YJL007CP47080 104 aa4.28□□□□□ -1.72
SWD3YBR175W YPR204WQ08995 1032 aa4.28□□□□□ -1.72
SWD3YBR175W STE6P12866 1290 aa4.27□□□□□ -1.73
SWD3YBR175W LYS5P50113 272 aa4.27□□□□□ -1.73
SWD3YBR175W TEC1P18412 486 aa4.26□□□□□ -1.73
SWD3YBR175W FBP26P32604 452 aa4.26□□□□□ -1.73
SWD3YBR175W SLD2P34252 453 aa4.26□□□□□ -1.73
SWD3YBR175W SNU71P53207 620 aaKnown RBP4.26□□□□□ -1.73
SWD3YBR175W NAM8Q00539 523 aaKnown RBP4.26□□□□□ -1.73
SWD3YBR175W BDS1Q08347 646 aa4.26□□□□□ -1.73
SWD3YBR175W CDC19P00549 500 aaKnown RBP4.25□□□□□ -1.73
SWD3YBR175W SUP45P12385 437 aaKnown RBP4.25□□□□□ -1.73
SWD3YBR175W FRA1Q07825 749 aa4.25□□□□□ -1.73
SWD3YBR175W CPS1P27614 576 aa4.24□□□□□ -1.73
SWD3YBR175W GUT2P32191 649 aa4.24□□□□□ -1.73
SWD3YBR175W RPL34BP40525 121 aaKnown RBP4.24□□□□□ -1.73
SWD3YBR175W VTC4P47075 721 aa4.24□□□□□ -1.73
SWD3YBR175W JJJ3P47138 172 aa4.24□□□□□ -1.73
SWD3YBR175W TIF1P10081 395 aaKnown RBP4.23□□□□□ -1.73
SWD3YBR175W BIO2P32451 375 aa4.23□□□□□ -1.73
SWD3YBR175W YPP1P46951 817 aa4.23□□□□□ -1.73
SWD3YBR175W RPL34AP87262 121 aaPredicted RBP4.23□□□□□ -1.73
SWD3YBR175W YDJ1P25491 409 aaKnown RBP4.22□□□□□ -1.73
SWD3YBR175W DAL1P32375 460 aa4.22□□□□□ -1.73
SWD3YBR175W CDC3P32457 520 aaKnown RBP4.22□□□□□ -1.73
SWD3YBR175W ISU1Q03020 165 aa4.22□□□□□ -1.73
SWD3YBR175W STE20Q03497 939 aaKnown RBP4.22□□□□□ -1.73
SWD3YBR175W PUS1Q12211 544 aaKnown RBP4.22□□□□□ -1.73
SWD3YBR175W PHM7Q12252 991 aa4.22□□□□□ -1.73
SWD3YBR175W MCM16Q12262 181 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms