RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W IOC4Q04213 475 aa3.01□□□□□ -1.93
NUP170YBL079W IRC3Q06683 689 aa3.01□□□□□ -1.93
NUP170YBL079W LYS2P07702 1392 aa3.01□□□□□ -1.93
NUP170YBL079W SSP2Q08646 371 aa3.01□□□□□ -1.93
NUP170YBL079W RMT2Q03305 412 aa3.01□□□□□ -1.93
NUP170YBL079W RCM1P53972 490 aa3.01□□□□□ -1.93
NUP170YBL079W NYV1Q12255 253 aa3.01□□□□□ -1.93
NUP170YBL079W RPO41P13433 1351 aaKnown RBP3□□□□□ -1.93
NUP170YBL079W DOT5P40553 215 aa3□□□□□ -1.93
NUP170YBL079W CSF1Q12150 2958 aa3□□□□□ -1.93
NUP170YBL079W YAF9P53930 226 aa3□□□□□ -1.93
NUP170YBL079W SNF2P22082 1703 aa3□□□□□ -1.93
NUP170YBL079W PES4P39684 611 aa3□□□□□ -1.93
NUP170YBL079W FOX2Q02207 900 aaKnown RBP3□□□□□ -1.93
NUP170YBL079W NSE3Q05541 303 aa3□□□□□ -1.93
NUP170YBL079W UGA3P26370 528 aa3□□□□□ -1.93
NUP170YBL079W YBP2P53169 641 aa3□□□□□ -1.93
NUP170YBL079W PUS5Q06244 254 aa2.99□□□□□ -1.93
NUP170YBL079W SSM4P40318 1319 aa2.99□□□□□ -1.93
NUP170YBL079W SHC1P39000 512 aa2.99□□□□□ -1.93
NUP170YBL079W TIM50Q02776 476 aa2.99□□□□□ -1.93
NUP170YBL079W AOS1Q06624 347 aa2.99□□□□□ -1.93
NUP170YBL079W URB1P34241 1764 aaKnown RBP2.99□□□□□ -1.93
NUP170YBL079W GAL2P13181 574 aa2.99□□□□□ -1.93
NUP170YBL079W RRT6P53117 311 aaPredicted RBP2.99□□□□□ -1.93
NUP170YBL079W ERT1P38140 529 aa2.98□□□□□ -1.93
NUP170YBL079W ERO1Q03103 563 aa2.98□□□□□ -1.93
NUP170YBL079W TIF6Q12522 245 aaKnown RBP2.98□□□□□ -1.93
NUP170YBL079W COBP00163 385 aa2.98□□□□□ -1.93
NUP170YBL079W MSM1P22438 575 aa2.98□□□□□ -1.93
NUP170YBL079W PHM7Q12252 991 aa2.98□□□□□ -1.93
NUP170YBL079W KAR2P16474 682 aaKnown RBP2.98□□□□□ -1.93
NUP170YBL079W RTG2P32608 588 aaKnown RBP2.98□□□□□ -1.93
NUP170YBL079W POM152P39685 1337 aa2.97□□□□□ -1.93
NUP170YBL079W YKR075CP36155 307 aa2.97□□□□□ -1.93
NUP170YBL079W NPR2P39923 615 aa2.97□□□□□ -1.93
NUP170YBL079W MSB3P48566 633 aaPredicted RBP2.97□□□□□ -1.93
NUP170YBL079W GRE2Q12068 342 aaKnown RBP2.97□□□□□ -1.93
NUP170YBL079W DPS1P04802 557 aaKnown RBP2.97□□□□□ -1.93
NUP170YBL079W KCC4P25389 1037 aa2.97□□□□□ -1.93
NUP170YBL079W YFL040WP43562 540 aa2.97□□□□□ -1.93
NUP170YBL079W POL5P39985 1022 aaKnown RBP2.96□□□□□ -1.93
NUP170YBL079W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.96□□□□□ -1.93not detected
NUP170YBL079W SEC20P28791 383 aa2.96□□□□□ -1.94
NUP170YBL079W WHI3P34761 661 aaKnown RBP2.96□□□□□ -1.94
NUP170YBL079W MAM1P40065 302 aa2.96□□□□□ -1.94
NUP170YBL079W KIP3P53086 805 aaKnown RBP2.96□□□□□ -1.94
NUP170YBL079W SIT4P20604 311 aa2.96□□□□□ -1.94
NUP170YBL079W ADR1P07248 1323 aa2.96□□□□□ -1.94
NUP170YBL079W TOS1P38288 455 aa2.96□□□□□ -1.94
NUP170YBL079W AUS1Q08409 1394 aa2.96□□□□□ -1.94
NUP170YBL079W RPS9AO13516 197 aaKnown RBP2.95□□□□□ -1.94
NUP170YBL079W LPD1P09624 499 aaKnown RBP2.95□□□□□ -1.94
NUP170YBL079W CWC15Q03772 175 aaKnown RBP2.95□□□□□ -1.94
NUP170YBL079W NOP53Q12080 455 aaKnown RBP2.95□□□□□ -1.94
NUP170YBL079W HGH1P48362 394 aaKnown RBP2.94□□□□□ -1.94
NUP170YBL079W RIX7Q07844 837 aaKnown RBP2.94□□□□□ -1.94
NUP170YBL079W DUR1,2P32528 1835 aaKnown RBP2.94□□□□□ -1.94
NUP170YBL079W FKS3Q04952 1785 aa2.94□□□□□ -1.94
NUP170YBL079W SLI15P38283 698 aa2.94□□□□□ -1.94
NUP170YBL079W FMP30Q02883 468 aa2.94□□□□□ -1.94
NUP170YBL079W APC1P53886 1748 aa2.94□□□□□ -1.94
NUP170YBL079W CST9Q06032 482 aa2.94□□□□□ -1.94
NUP170YBL079W BDF2Q07442 638 aa2.94□□□□□ -1.94
NUP170YBL079W RPS24AP0CX31 135 aaKnown RBP2.94□□□□□ -1.94
NUP170YBL079W RPS24BP0CX32 135 aaKnown RBP2.94□□□□□ -1.94
NUP170YBL079W AIM7Q12156 149 aa2.94□□□□□ -1.94
NUP170YBL079W TY3A-GQ12173 290 aa2.94□□□□□ -1.94
NUP170YBL079W TY3A-IQ99219 290 aa2.94□□□□□ -1.94
NUP170YBL079W NCS6P53088 359 aa2.93□□□□□ -1.94
NUP170YBL079W SQS1P53866 767 aaKnown RBP2.93□□□□□ -1.94
NUP170YBL079W ATG20Q07528 640 aa2.93□□□□□ -1.94
NUP170YBL079W FKH1P40466 484 aa2.93□□□□□ -1.94
NUP170YBL079W CTH1P47976 325 aa2.93□□□□□ -1.94
NUP170YBL079W RET1P22276 1149 aaKnown RBP2.93□□□□□ -1.94
NUP170YBL079W RCR1P38212 213 aa2.93□□□□□ -1.94
NUP170YBL079W NUG1P40010 520 aaKnown RBP2.93□□□□□ -1.94
NUP170YBL079W HAT1Q12341 374 aa2.93□□□□□ -1.94
NUP170YBL079W YKU70P32807 602 aa2.92□□□□□ -1.94
NUP170YBL079W YKR018CP36114 725 aa2.92□□□□□ -1.94
NUP170YBL079W LYS4P49367 693 aaPredicted RBP2.92□□□□□ -1.94
NUP170YBL079W PPH3P32345 308 aa2.92□□□□□ -1.94
NUP170YBL079W GEF1P37020 779 aa2.92□□□□□ -1.94
NUP170YBL079W SEN54Q02825 467 aaPredicted RBP2.92□□□□□ -1.94
NUP170YBL079W SYF1Q04048 859 aaPredicted RBP2.92□□□□□ -1.94
NUP170YBL079W YML133CQ03099 1374 aa2.92□□□□□ -1.94
NUP170YBL079W FRK1Q03002 865 aaPredicted RBP2.92□□□□□ -1.94
NUP170YBL079W OSM1P21375 501 aaKnown RBP2.91□□□□□ -1.94
NUP170YBL079W FUN12P39730 1002 aaKnown RBP2.91□□□□□ -1.94
NUP170YBL079W ENP2P48234 707 aaKnown RBP2.91□□□□□ -1.94
NUP170YBL079W RRG1Q12167 365 aaPredicted RBP2.91□□□□□ -1.94
NUP170YBL079W ZDS2P54786 942 aa2.91□□□□□ -1.94
NUP170YBL079W SAS4Q04003 481 aa2.91□□□□□ -1.94
NUP170YBL079W ACK1Q07622 623 aaPredicted RBP2.91□□□□□ -1.94
NUP170YBL079W MSC7P38694 644 aa2.91□□□□□ -1.94
NUP170YBL079W SSA4P22202 642 aaKnown RBP2.91□□□□□ -1.94
NUP170YBL079W NPL4P33755 580 aa2.91□□□□□ -1.94
NUP170YBL079W DSD1P53095 428 aa2.9□□□□□ -1.94
NUP170YBL079W VHR2P40041 505 aa2.9□□□□□ -1.95
NUP170YBL079W PEA2P40091 420 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 94 ms