RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Shq1Q7TMX5 569 aa21.11■□□□□ 0.97
Usp47-201ENSMUST00000106653 HdgfP51859 237 aaKnown RBP21.1■□□□□ 0.97
Usp47-201ENSMUST00000106653 Dnai1Q8C0M8 701 aa21.1■□□□□ 0.97
Usp47-201ENSMUST00000106653 Ap3b2Q9JME5 1082 aa21.09■□□□□ 0.97
Usp47-201ENSMUST00000106653 Rassf8Q8CJ96 419 aa21.09■□□□□ 0.97
Usp47-201ENSMUST00000106653 Ankrd36D3Z4K0 1415 aa21.09■□□□□ 0.97
Usp47-201ENSMUST00000106653 Urb2E9Q7L1 1524 aaKnown RBP21.08■□□□□ 0.97
Usp47-201ENSMUST00000106653 Pibf1E9Q6K3 756 aa21.07■□□□□ 0.96
Usp47-201ENSMUST00000106653 Fam184bQ0KK56 942 aa21.07■□□□□ 0.96
Usp47-201ENSMUST00000106653 Duox2A2AQ99 1517 aa21.07■□□□□ 0.96
Usp47-201ENSMUST00000106653 Pde3bQ61409 1100 aa21.06■□□□□ 0.96
Usp47-201ENSMUST00000106653 Nol10Q5RJG1 687 aaKnown RBP21.06■□□□□ 0.96
Usp47-201ENSMUST00000106653 NrkQ9R0G8 1455 aa21.06■□□□□ 0.96
Usp47-201ENSMUST00000106653 Ipo8Q7TMY7 1010 aa21.05■□□□□ 0.96
Usp47-201ENSMUST00000106653 ErbinQ80TH2 1402 aa21.05■□□□□ 0.96
Usp47-201ENSMUST00000106653 Kif7B7ZNG0 1348 aa21.04■□□□□ 0.96
Usp47-201ENSMUST00000106653 Mfap1aC0HKD8 439 aaKnown RBP21.04■□□□□ 0.96
Usp47-201ENSMUST00000106653 Mfap1bC0HKD9 439 aaKnown RBP21.04■□□□□ 0.96
Usp47-201ENSMUST00000106653 Rock1P70335 1354 aa21.03■□□□□ 0.96
Usp47-201ENSMUST00000106653 Vps8Q0P5W1 1427 aa21.03■□□□□ 0.96
Usp47-201ENSMUST00000106653 Mink1Q9JM52 1308 aa21.02■□□□□ 0.96
Usp47-201ENSMUST00000106653 Stk31Q99MW1 1018 aa21.01■□□□□ 0.95
Usp47-201ENSMUST00000106653 Nsd2Q8BVE8 1365 aa21.01■□□□□ 0.95
Usp47-201ENSMUST00000106653 Ipo9Q91YE6 1041 aa21■□□□□ 0.95
Usp47-201ENSMUST00000106653 GsdmaQ9EST1 446 aa21■□□□□ 0.95
Usp47-201ENSMUST00000106653 Naip1Q9QWK5 1403 aa21■□□□□ 0.95
Usp47-201ENSMUST00000106653 PtmsQ9D0J8 101 aaKnown RBP20.99■□□□□ 0.95
Usp47-201ENSMUST00000106653 Zscan10Q3URR7 782 aa20.98■□□□□ 0.95
Usp47-201ENSMUST00000106653 Q8BT18 775 aa20.98■□□□□ 0.95
Usp47-201ENSMUST00000106653 Cabp4Q8VHC5 271 aa20.98■□□□□ 0.95
Usp47-201ENSMUST00000106653 Grin2bQ01097 1482 aa20.97■□□□□ 0.95
Usp47-201ENSMUST00000106653 MecomP14404 1042 aa20.96■□□□□ 0.95
Usp47-201ENSMUST00000106653 Ift140E9PY46 1464 aa20.95■□□□□ 0.94
Usp47-201ENSMUST00000106653 Prdm16A2A935 1275 aa20.94■□□□□ 0.94
Usp47-201ENSMUST00000106653 Gm7298A0A0N4SVU1 1476 aa20.94■□□□□ 0.94
Usp47-201ENSMUST00000106653 Zfp644E9QA22 1323 aa20.94■□□□□ 0.94
Usp47-201ENSMUST00000106653 Pde4cQ3UEI1 686 aa20.94■□□□□ 0.94
Usp47-201ENSMUST00000106653 Ccdc60Q8C4J0 545 aa20.93■□□□□ 0.94
Usp47-201ENSMUST00000106653 GorabQ8BRM2 368 aa20.93■□□□□ 0.94
Usp47-201ENSMUST00000106653 Arhgap31A6X8Z5 1425 aa20.92■□□□□ 0.94
Usp47-201ENSMUST00000106653 PogzQ8BZH4 1409 aaKnown RBP20.92■□□□□ 0.94
Usp47-201ENSMUST00000106653 Map3k1P53349 1493 aa20.92■□□□□ 0.94
Usp47-201ENSMUST00000106653 Arhgap5P97393 1501 aa20.92■□□□□ 0.94
Usp47-201ENSMUST00000106653 Iffo2Q8R2V2 512 aa20.92■□□□□ 0.94
Usp47-201ENSMUST00000106653 Arhgef5E9Q7D5 1581 aa20.91■□□□□ 0.94
Usp47-201ENSMUST00000106653 Pcmtd1P59913 357 aa20.9■□□□□ 0.94
Usp47-201ENSMUST00000106653 Anapc15P60007 132 aa20.9■□□□□ 0.94
Usp47-201ENSMUST00000106653 Pak3Q61036 559 aa20.9■□□□□ 0.94
Usp47-201ENSMUST00000106653 Arap1Q4LDD4 1452 aa20.9■□□□□ 0.94
Usp47-201ENSMUST00000106653 Chmp3Q9CQ10 224 aa20.9■□□□□ 0.94
Usp47-201ENSMUST00000106653 Brpf1B2RRD7 1212 aa20.89■□□□□ 0.93
Usp47-201ENSMUST00000106653 Esx1O88933 382 aa20.89■□□□□ 0.93
Usp47-201ENSMUST00000106653 Frmpd1A2AKB4 1549 aa20.88■□□□□ 0.93
Usp47-201ENSMUST00000106653 Ralbp1Q62172 648 aa20.87■□□□□ 0.93
Usp47-201ENSMUST00000106653 Ccdc146E9Q9F7 977 aa20.86■□□□□ 0.93
Usp47-201ENSMUST00000106653 Mroh2bQ7M6Y6 1581 aa20.86■□□□□ 0.93
Usp47-201ENSMUST00000106653 Cgnl1Q6AW69 1298 aa20.85■□□□□ 0.93
Usp47-201ENSMUST00000106653 Mrc2Q64449 1479 aa20.85■□□□□ 0.93
Usp47-201ENSMUST00000106653 G3bp1P97855 465 aaKnown RBP20.85■□□□□ 0.93
Usp47-201ENSMUST00000106653 Dnttip2Q8R2M2 758 aaKnown RBP20.85■□□□□ 0.93
Usp47-201ENSMUST00000106653 Adam1bQ8R534 806 aa20.85■□□□□ 0.93
Usp47-201ENSMUST00000106653 Erich6bQ9D4S6 220 aa20.85■□□□□ 0.93
Usp47-201ENSMUST00000106653 Rab11fip3Q8CHD8 1047 aa20.84■□□□□ 0.93
Usp47-201ENSMUST00000106653 Smarce1O54941 411 aaKnown RBP20.84■□□□□ 0.93
Usp47-201ENSMUST00000106653 Map3k5O35099 1380 aa20.83■□□□□ 0.93
Usp47-201ENSMUST00000106653 Ylpm1Q9R0I7 1386 aaKnown RBP20.83■□□□□ 0.93
Usp47-201ENSMUST00000106653 Puf60Q3UEB3 564 aaKnown RBP20.83■□□□□ 0.93
Usp47-201ENSMUST00000106653 Cd109Q8R422 1442 aa20.83■□□□□ 0.93
Usp47-201ENSMUST00000106653 Nolc1E9Q5C9 702 aaKnown RBP20.83■□□□□ 0.92
Usp47-201ENSMUST00000106653 Gsto1O09131 240 aa20.83■□□□□ 0.92
Usp47-201ENSMUST00000106653 Slc4a10Q5DTL9 1118 aa20.83■□□□□ 0.92
Usp47-201ENSMUST00000106653 Gm21190A0A0G2JGJ6 266 aa20.82■□□□□ 0.92
Usp47-201ENSMUST00000106653 CgnP59242 1191 aa20.82■□□□□ 0.92
Usp47-201ENSMUST00000106653 Fgd6Q69ZL1 1399 aa20.81■□□□□ 0.92
Usp47-201ENSMUST00000106653 Rpgrip1lQ8CG73 1264 aa20.8■□□□□ 0.92
Usp47-201ENSMUST00000106653 Ncapd3Q6ZQK0 1506 aa20.8■□□□□ 0.92
Usp47-201ENSMUST00000106653 Gm973E9Q295 1059 aa20.79■□□□□ 0.92
Usp47-201ENSMUST00000106653 Ccdc141E9Q8Q6 1531 aa20.79■□□□□ 0.92
Usp47-201ENSMUST00000106653 Irx3P81067 507 aa20.78■□□□□ 0.92
Usp47-201ENSMUST00000106653 PtprkP35822 1457 aa20.77■□□□□ 0.92
Usp47-201ENSMUST00000106653 R3hcc1Q8BSI6 488 aa20.77■□□□□ 0.92
Usp47-201ENSMUST00000106653 ChgaP26339 463 aaKnown RBP20.76■□□□□ 0.91
Usp47-201ENSMUST00000106653 Ttll5Q8CHB8 1328 aa20.75■□□□□ 0.91
Usp47-201ENSMUST00000106653 Tiam1Q60610 1591 aa20.75■□□□□ 0.91
Usp47-201ENSMUST00000106653 EprsQ8CGC7 1512 aaKnown RBP20.75■□□□□ 0.91
Usp47-201ENSMUST00000106653 Q9D9H8 365 aa20.74■□□□□ 0.91
Usp47-201ENSMUST00000106653 Fyb1O35601 819 aa20.74■□□□□ 0.91
Usp47-201ENSMUST00000106653 Atp6v1dP57746 247 aa20.74■□□□□ 0.91
Usp47-201ENSMUST00000106653 Trim58Q5NCC9 485 aa20.73■□□□□ 0.91
Usp47-201ENSMUST00000106653 Atp2b2Q9R0K7 1198 aa20.73■□□□□ 0.91
Usp47-201ENSMUST00000106653 Ccdc30Q8BVF4 654 aa20.72■□□□□ 0.91
Usp47-201ENSMUST00000106653 Ciz1Q8VEH2 845 aa20.72■□□□□ 0.91
Usp47-201ENSMUST00000106653 FanciQ8K368 1330 aa20.71■□□□□ 0.91
Usp47-201ENSMUST00000106653 Dnai2A2AC93 623 aa20.71■□□□□ 0.91
Usp47-201ENSMUST00000106653 Myom3A2ABU4 1439 aa20.71■□□□□ 0.91
Usp47-201ENSMUST00000106653 Cc2d1aQ8K1A6 943 aa20.71■□□□□ 0.91
Usp47-201ENSMUST00000106653 AU015836B2RUM3 263 aa20.7■□□□□ 0.91
Usp47-201ENSMUST00000106653 Chmp7Q8R1T1 451 aa20.7■□□□□ 0.91
Usp47-201ENSMUST00000106653 Gm14025A2AP89 1413 aa20.7■□□□□ 0.9
Usp47-201ENSMUST00000106653 Usp16Q99LG0 825 aa20.69■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms