RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Rhox8Q6VSS7 320 aa30.11■■■□□ 2.41
Usp47-201ENSMUST00000106653 NischQ80TM9 1593 aa27.02■■□□□ 1.92
Usp47-201ENSMUST00000106653 Rpgrip1Q9EPQ2 1331 aa26.88■■□□□ 1.89
Usp47-201ENSMUST00000106653 Ccdc136Q3TVA9 1136 aa26.86■■□□□ 1.89
Usp47-201ENSMUST00000106653 Ehmt2Q9Z148 1263 aaKnown RBP26.77■■□□□ 1.88
Usp47-201ENSMUST00000106653 Esf1Q3V1V3 845 aaKnown RBP26.63■■□□□ 1.85
Usp47-201ENSMUST00000106653 Cngb1E1AZ71 1325 aa26.61■■□□□ 1.85
Usp47-201ENSMUST00000106653 Trim41Q5NCC3 630 aa26.3■■□□□ 1.8
Usp47-201ENSMUST00000106653 Gab3Q8BSM5 595 aa26.17■■□□□ 1.78
Usp47-201ENSMUST00000106653 Zeb1Q64318 1117 aa26■■□□□ 1.75
Usp47-201ENSMUST00000106653 Npm2Q80W85 207 aa25.97■■□□□ 1.75
Usp47-201ENSMUST00000106653 Las1lA2BE28 776 aaKnown RBP25.92■■□□□ 1.74
Usp47-201ENSMUST00000106653 Wdr66E9Q743 1299 aa25.87■■□□□ 1.73
Usp47-201ENSMUST00000106653 Ube2uB1AUC4 352 aa25.82■■□□□ 1.72
Usp47-201ENSMUST00000106653 Myt1lP97500 1187 aa25.74■■□□□ 1.71
Usp47-201ENSMUST00000106653 Ccdc180J3QNE4 1664 aa25.3■■□□□ 1.64
Usp47-201ENSMUST00000106653 Abcc9P70170 1546 aa25.21■■□□□ 1.63
Usp47-201ENSMUST00000106653 Acin1Q9JIX8 1338 aaKnown RBP25.17■■□□□ 1.62
Usp47-201ENSMUST00000106653 UbtfP25976 765 aaKnown RBP25.16■■□□□ 1.62
Usp47-201ENSMUST00000106653 Rtl1Q7M732 1744 aa25.11■■□□□ 1.61
Usp47-201ENSMUST00000106653 HrcG5E8J6 738 aa25.08■■□□□ 1.61
Usp47-201ENSMUST00000106653 Zcchc6Q5BLK4 1491 aaKnown RBP25.08■■□□□ 1.61
Usp47-201ENSMUST00000106653 Il27Q8K3I6 234 aa25.03■■□□□ 1.6
Usp47-201ENSMUST00000106653 NefmP08553 848 aa25.01■■□□□ 1.59
Usp47-201ENSMUST00000106653 Gm35339A0A140LHH9 1649 aa24.91■■□□□ 1.58
Usp47-201ENSMUST00000106653 Pelp1Q9DBD5 1123 aaKnown RBP24.89■■□□□ 1.57
Usp47-201ENSMUST00000106653 Abcc8B2RUS7 1588 aa24.68■■□□□ 1.54
Usp47-201ENSMUST00000106653 Ap3b1Q9Z1T1 1105 aa24.57■■□□□ 1.52
Usp47-201ENSMUST00000106653 Stra8P70278 393 aa24.51■■□□□ 1.51
Usp47-201ENSMUST00000106653 Slc24a1Q91WD8 1130 aa24.46■■□□□ 1.51
Usp47-201ENSMUST00000106653 Fam50aQ9WV03 339 aaKnown RBP24.42■■□□□ 1.5
Usp47-201ENSMUST00000106653 CenpbP27790 599 aa24.32■■□□□ 1.48
Usp47-201ENSMUST00000106653 Neurod1Q60867 357 aa24.18■■□□□ 1.46
Usp47-201ENSMUST00000106653 NclP09405 707 aaKnown RBP24.16■■□□□ 1.46
Usp47-201ENSMUST00000106653 Cdk11bP24788 784 aaKnown RBP24.16■■□□□ 1.46
Usp47-201ENSMUST00000106653 Npm1Q61937 292 aaKnown RBP24.1■■□□□ 1.45
Usp47-201ENSMUST00000106653 Pcgf6Q99NA9 353 aa24.09■■□□□ 1.45
Usp47-201ENSMUST00000106653 TonslQ6NZL6 1363 aa24■■□□□ 1.43
Usp47-201ENSMUST00000106653 NrdcQ8BHG1 1161 aa24■■□□□ 1.43
Usp47-201ENSMUST00000106653 Anp32bQ9EST5 272 aaKnown RBP23.99■■□□□ 1.43
Usp47-201ENSMUST00000106653 Os9Q8K2C7 672 aa23.97■■□□□ 1.43
Usp47-201ENSMUST00000106653 Mier1Q5UAK0 511 aa23.97■■□□□ 1.43
Usp47-201ENSMUST00000106653 Ppargc1bQ8VHJ7 1014 aa23.95■■□□□ 1.42
Usp47-201ENSMUST00000106653 Nop58Q6DFW4 536 aaKnown RBP23.92■■□□□ 1.42
Usp47-201ENSMUST00000106653 Brd4Q9ESU6 1400 aaKnown RBP23.9■■□□□ 1.42
Usp47-201ENSMUST00000106653 Lmod2Q3UHZ5 550 aa23.88■■□□□ 1.41
Usp47-201ENSMUST00000106653 Plekhg3Q4VAC9 1341 aa23.84■■□□□ 1.41
Usp47-201ENSMUST00000106653 Rb1cc1Q9ESK9 1588 aa23.81■■□□□ 1.4
Usp47-201ENSMUST00000106653 Supt5hO55201 1082 aaKnown RBP23.79■■□□□ 1.4
Usp47-201ENSMUST00000106653 Tnnt3Q9QZ47 272 aa23.79■■□□□ 1.4
Usp47-201ENSMUST00000106653 Eif5bQ05D44 1216 aaKnown RBP23.73■■□□□ 1.39
Usp47-201ENSMUST00000106653 Zbtb7cQ8VCZ7 619 aa23.68■■□□□ 1.38
Usp47-201ENSMUST00000106653 NeflP08551 543 aa23.66■■□□□ 1.38
Usp47-201ENSMUST00000106653 Amer1Q7TS75 1132 aa23.65■■□□□ 1.38
Usp47-201ENSMUST00000106653 Chic1Q8CBW7 227 aa23.6■■□□□ 1.37
Usp47-201ENSMUST00000106653 Dcaf1Q80TR8 1506 aa23.59■■□□□ 1.37
Usp47-201ENSMUST00000106653 Cep164Q5DU05 1446 aa23.58■■□□□ 1.37
Usp47-201ENSMUST00000106653 Hnrnpul2Q00PI9 745 aaKnown RBP23.55■■□□□ 1.36
Usp47-201ENSMUST00000106653 Ifnlr1Q8CGK5 535 aa23.52■■□□□ 1.36
Usp47-201ENSMUST00000106653 Clip1Q922J3 1391 aa23.5■■□□□ 1.35
Usp47-201ENSMUST00000106653 NacadQ5SWP3 1504 aa23.45■■□□□ 1.35
Usp47-201ENSMUST00000106653 Ubl4bQ9CQ84 188 aa23.43■■□□□ 1.34
Usp47-201ENSMUST00000106653 ClspnQ80YR7 1315 aa23.42■■□□□ 1.34
Usp47-201ENSMUST00000106653 Gm13697A2AK42 830 aa23.36■■□□□ 1.33
Usp47-201ENSMUST00000106653 Fkbp15Q6P9Q6 1216 aaKnown RBP23.33■■□□□ 1.33
Usp47-201ENSMUST00000106653 Erich6D3Z6S9 713 aa23.31■■□□□ 1.32
Usp47-201ENSMUST00000106653 Eid3Q3V124 375 aa23.31■■□□□ 1.32
Usp47-201ENSMUST00000106653 Ttbk1Q6PCN3 1308 aa23.27■■□□□ 1.32
Usp47-201ENSMUST00000106653 Zbtb4Q5F293 982 aa23.26■■□□□ 1.31
Usp47-201ENSMUST00000106653 Baz1aO88379 1555 aa23.22■■□□□ 1.31
Usp47-201ENSMUST00000106653 4933416C03RikQ3V063 378 aa23.21■■□□□ 1.31
Usp47-201ENSMUST00000106653 Mapk8ip2Q9ERE9 830 aa23.16■■□□□ 1.3
Usp47-201ENSMUST00000106653 Atp1b4Q99ME6 356 aa23.16■■□□□ 1.3
Usp47-201ENSMUST00000106653 Hdac5Q9Z2V6 1113 aa23.11■■□□□ 1.29
Usp47-201ENSMUST00000106653 Ccer2J3QPU5 274 aa23.11■■□□□ 1.29
Usp47-201ENSMUST00000106653 Nlrp6Q91WS2 869 aa23.08■■□□□ 1.28
Usp47-201ENSMUST00000106653 Myt1Q8CFC2 1127 aa23.04■■□□□ 1.28
Usp47-201ENSMUST00000106653 BlmO88700 1416 aa23.02■■□□□ 1.28
Usp47-201ENSMUST00000106653 Chic2Q9D9G3 165 aa23.01■■□□□ 1.27
Usp47-201ENSMUST00000106653 Golga3P55937 1487 aa23.01■■□□□ 1.27
Usp47-201ENSMUST00000106653 Prdm10Q3UTQ7 1184 aa23.01■■□□□ 1.27
Usp47-201ENSMUST00000106653 Sall2Q9QX96 1004 aa22.98■■□□□ 1.27
Usp47-201ENSMUST00000106653 Gm13695A2AK44 830 aa22.96■■□□□ 1.27
Usp47-201ENSMUST00000106653 Kif15Q6P9L6 1387 aa22.95■■□□□ 1.26
Usp47-201ENSMUST00000106653 Rsf1E9PWW9 1441 aaKnown RBP22.95■■□□□ 1.26
Usp47-201ENSMUST00000106653 Setd5Q5XJV7 1441 aa22.93■■□□□ 1.26
Usp47-201ENSMUST00000106653 Kdm5dQ62240 1548 aa22.92■■□□□ 1.26
Usp47-201ENSMUST00000106653 Ercc6F8VPZ5 1481 aa22.89■■□□□ 1.25
Usp47-201ENSMUST00000106653 Rtl5Q5DTT4 599 aa22.88■■□□□ 1.25
Usp47-201ENSMUST00000106653 Anp32aO35381 247 aa22.85■■□□□ 1.25
Usp47-201ENSMUST00000106653 Polr3glQ8R0C0 218 aa22.82■■□□□ 1.24
Usp47-201ENSMUST00000106653 Plppr3Q7TPB0 716 aa22.81■■□□□ 1.24
Usp47-201ENSMUST00000106653 Ccdc18Q640L5 1455 aa22.77■■□□□ 1.24
Usp47-201ENSMUST00000106653 Clstn2Q9ER65 966 aa22.76■■□□□ 1.23
Usp47-201ENSMUST00000106653 4930567H17RikQ3V0K5 233 aa22.66■■□□□ 1.22
Usp47-201ENSMUST00000106653 Eea1Q8BL66 1411 aa22.65■■□□□ 1.22
Usp47-201ENSMUST00000106653 Anks4bQ8K3X6 423 aa22.64■■□□□ 1.21
Usp47-201ENSMUST00000106653 Csrnp3P59055 597 aa22.59■■□□□ 1.21
Usp47-201ENSMUST00000106653 Gm38655A0A286YDK6 273 aa22.58■■□□□ 1.21
Usp47-201ENSMUST00000106653 Arhgap27A2AB59 869 aa22.56■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 6.7 ms