RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Rassf8Q8CJ96 419 aa12.93□□□□□ -0.34
Scn8a-201ENSMUST00000082209 1700019A02RikA0A087WPV9 146 aa12.93□□□□□ -0.34
Scn8a-201ENSMUST00000082209 Ralbp1Q62172 648 aa12.92□□□□□ -0.34
Scn8a-201ENSMUST00000082209 Filip1lQ6P6L0 1131 aa12.92□□□□□ -0.34
Scn8a-201ENSMUST00000082209 Dcaf11Q91VU6 549 aa12.92□□□□□ -0.34
Scn8a-201ENSMUST00000082209 Kif7B7ZNG0 1348 aa12.9□□□□□ -0.34
Scn8a-201ENSMUST00000082209 Kif16bB1AVY7 1312 aa12.9□□□□□ -0.34
Scn8a-201ENSMUST00000082209 NgefQ8CHT1 710 aa12.9□□□□□ -0.34
Scn8a-201ENSMUST00000082209 Cabp1Q9JLK7 227 aa12.9□□□□□ -0.34
Scn8a-201ENSMUST00000082209 Shroom4Q1W617 1475 aa12.9□□□□□ -0.34
Scn8a-201ENSMUST00000082209 Srek1Q8BZX4 494 aaKnown RBP12.89□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Armcx1Q9CX83 456 aa12.89□□□□□ -0.35
Scn8a-201ENSMUST00000082209 U2surpQ6NV83 1029 aaKnown RBP12.89□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Top2bQ64511 1612 aa12.88□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Chmp4cQ9D7F7 232 aa12.88□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Tmco5bQ80X59 307 aa12.88□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Psme1P97371 249 aa12.88□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Evc2Q8K1G2 1220 aa12.88□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Nsd2Q8BVE8 1365 aa12.87□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Tpm4Q6IRU2 248 aa12.87□□□□□ -0.35
Scn8a-201ENSMUST00000082209 NrkQ9R0G8 1455 aa12.87□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Tpm1P58771 284 aa12.87□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Tpm3P21107 285 aaKnown RBP12.87□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Atl3Q91YH5 541 aa12.87□□□□□ -0.35
Scn8a-201ENSMUST00000082209 LrpprcQ6PB66 1392 aaKnown RBP12.87□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Tpm2P58774 284 aa12.86□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Ksr2Q3UVC0 959 aa12.86□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Hook1Q8BIL5 728 aa12.86□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Kif3aP28741 701 aa12.86□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Trim30aP15533 496 aa12.86□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Cnga1P29974 684 aa12.86□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Zrsr2Q62377 462 aaKnown RBP12.85□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Mfap1aC0HKD8 439 aaKnown RBP12.85□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Mfap1bC0HKD9 439 aaKnown RBP12.85□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Ift140E9PY46 1464 aa12.85□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Efcab5A0JP43 1406 aa12.85□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Casq1O09165 405 aa12.85□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Dapk1Q80YE7 1442 aa12.85□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Dhx8A2A4P0 1244 aaKnown RBP12.85□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Ddx11Q6AXC6 880 aa12.84□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Smc4Q8CG47 1286 aa12.84□□□□□ -0.35
Scn8a-201ENSMUST00000082209 MyclP10166 368 aa12.83□□□□□ -0.35
Scn8a-201ENSMUST00000082209 Cecr2E9Q2Z1 1453 aa12.83□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Spryd3E9Q9B3 442 aa12.83□□□□□ -0.36
Scn8a-201ENSMUST00000082209 PhaxQ9JJT9 385 aaKnown RBP12.83□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Tpd52l1O54818 204 aa12.83□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Ccdc34Q3UI66 367 aa12.83□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Hmgn5Q9JL35 406 aa12.82□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Nap1l3Q794H2 544 aa12.82□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Ap3b2Q9JME5 1082 aa12.82□□□□□ -0.36
Scn8a-201ENSMUST00000082209 CgnP59242 1191 aa12.82□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Dhx29Q6PGC1 1365 aaKnown RBP12.82□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Tiam1Q60610 1591 aa12.82□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Kiaa0754Q69ZZ9 979 aa12.82□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Rnf20Q5DTM8 973 aa12.81□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Ppp1r18Q8BQ30 594 aa12.81□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Ccer1Q9CQL2 403 aa12.81□□□□□ -0.36
Scn8a-201ENSMUST00000082209 SafbD3YXK2 937 aaKnown RBP12.81□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Plekhh1Q80TI1 1356 aa12.81□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Cplx2P84086 134 aa12.81□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Taf3Q5HZG4 932 aa12.81□□□□□ -0.36
Scn8a-201ENSMUST00000082209 KinQ8K339 391 aa12.8□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Clstn1Q9EPL2 979 aa12.8□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Cchcr1Q8K2I2 770 aa12.8□□□□□ -0.36
Scn8a-201ENSMUST00000082209 GsdmaQ9EST1 446 aa12.8□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Rabep1O35551 862 aa12.8□□□□□ -0.36
Scn8a-201ENSMUST00000082209 EzrP26040 586 aaKnown RBP12.8□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Trim58Q5NCC9 485 aa12.8□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Isy1Q69ZQ2 285 aaKnown RBP12.8□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Cetn4Q8K4K1 168 aa12.79□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Sf3a1Q8K4Z5 791 aaKnown RBP12.79□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Ccdc173A0JLY1 547 aa12.79□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Rtn4Q99P72 1162 aaKnown RBP12.79□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Stk31Q99MW1 1018 aa12.79□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Arhgef5E9Q7D5 1581 aa12.78□□□□□ -0.36
Scn8a-201ENSMUST00000082209 CrbnQ8C7D2 445 aa12.78□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Txndc2Q6P902 515 aa12.78□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Dusp9Q7TNL7 452 aa12.78□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Slc4a3P16283 1227 aa12.77□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Kif4P33174 1231 aa12.77□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Ppm1eQ80TL0 749 aa12.77□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Ipo7Q9EPL8 1038 aaKnown RBP12.77□□□□□ -0.36
Scn8a-201ENSMUST00000082209 Cc2d2bA0A286YDU8 1405 aa12.77□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Birc3O08863 600 aa12.77□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Tsen2Q6P7W5 460 aa12.77□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Ccdc171E9Q1U1 1324 aa12.77□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Slc4a1apE9PX68 744 aa12.77□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Kif3bQ61771 747 aa12.77□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Znf316Q6PGE4 1016 aa12.77□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Brpf1B2RRD7 1212 aa12.76□□□□□ -0.37
Scn8a-201ENSMUST00000082209 ErbinQ80TH2 1402 aa12.76□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Gripap1Q8VD04 806 aa12.76□□□□□ -0.37
Scn8a-201ENSMUST00000082209 FanciQ8K368 1330 aa12.76□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Mcm2P97310 904 aa12.76□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Stk26Q99JT2 416 aa12.76□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Sh3bgrQ9WUZ7 214 aa12.76□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Gsdma3Q5Y4Y6 464 aa12.75□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Prkrip1Q9CWV6 186 aaKnown RBP12.75□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Fam184bQ0KK56 942 aa12.74□□□□□ -0.37
Scn8a-201ENSMUST00000082209 Pank3Q8R2W9 370 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 157.2 ms