RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 ErbinQ80TH2 1402 aa18.54■□□□□ 0.56
Syne3-201ENSMUST00000067005 Ipo9Q91YE6 1041 aa18.53■□□□□ 0.56
Syne3-201ENSMUST00000067005 Sh3bp5Q9Z131 463 aa18.53■□□□□ 0.56
Syne3-201ENSMUST00000067005 Znf316Q6PGE4 1016 aa18.52■□□□□ 0.56
Syne3-201ENSMUST00000067005 Inpp5dQ9ES52 1191 aa18.52■□□□□ 0.56
Syne3-201ENSMUST00000067005 AampJ3QN89 436 aa18.52■□□□□ 0.56
Syne3-201ENSMUST00000067005 Ap3b2Q9JME5 1082 aa18.52■□□□□ 0.56
Syne3-201ENSMUST00000067005 Rad54l2Q99NG0 1466 aa18.52■□□□□ 0.55
Syne3-201ENSMUST00000067005 Sox12Q04890 314 aa18.51■□□□□ 0.55
Syne3-201ENSMUST00000067005 Urb2E9Q7L1 1524 aaKnown RBP18.51■□□□□ 0.55
Syne3-201ENSMUST00000067005 Ralbp1Q62172 648 aa18.5■□□□□ 0.55
Syne3-201ENSMUST00000067005 PogzQ8BZH4 1409 aaKnown RBP18.5■□□□□ 0.55
Syne3-201ENSMUST00000067005 Grin2bQ01097 1482 aa18.5■□□□□ 0.55
Syne3-201ENSMUST00000067005 Adam1bQ8R534 806 aa18.49■□□□□ 0.55
Syne3-201ENSMUST00000067005 Zscan10Q3URR7 782 aa18.49■□□□□ 0.55
Syne3-201ENSMUST00000067005 Nol10Q5RJG1 687 aaKnown RBP18.49■□□□□ 0.55
Syne3-201ENSMUST00000067005 Cluap1Q8R3P7 413 aa18.49■□□□□ 0.55
Syne3-201ENSMUST00000067005 Stk31Q99MW1 1018 aa18.49■□□□□ 0.55
Syne3-201ENSMUST00000067005 GsdmaQ9EST1 446 aa18.49■□□□□ 0.55
Syne3-201ENSMUST00000067005 Cgnl1Q6AW69 1298 aa18.48■□□□□ 0.55
Syne3-201ENSMUST00000067005 Rab11fip3Q8CHD8 1047 aa18.48■□□□□ 0.55
Syne3-201ENSMUST00000067005 Shq1Q7TMX5 569 aa18.47■□□□□ 0.55
Syne3-201ENSMUST00000067005 Kif7B7ZNG0 1348 aa18.47■□□□□ 0.55
Syne3-201ENSMUST00000067005 Arhgef5E9Q7D5 1581 aa18.47■□□□□ 0.55
Syne3-201ENSMUST00000067005 Ciz1Q8VEH2 845 aa18.46■□□□□ 0.55
Syne3-201ENSMUST00000067005 Znf330Q922H9 316 aa18.46■□□□□ 0.54
Syne3-201ENSMUST00000067005 Mroh2bQ7M6Y6 1581 aa18.45■□□□□ 0.54
Syne3-201ENSMUST00000067005 Ythdc1E9Q5K9 736 aaKnown RBP18.45■□□□□ 0.54
Syne3-201ENSMUST00000067005 Rassf8Q8CJ96 419 aa18.45■□□□□ 0.54
Syne3-201ENSMUST00000067005 Gm7298A0A0N4SVU1 1476 aa18.44■□□□□ 0.54
Syne3-201ENSMUST00000067005 Pde4cQ3UEI1 686 aa18.44■□□□□ 0.54
Syne3-201ENSMUST00000067005 Lmod3E9QA62 571 aa18.43■□□□□ 0.54
Syne3-201ENSMUST00000067005 Gm973E9Q295 1059 aa18.43■□□□□ 0.54
Syne3-201ENSMUST00000067005 Smarce1O54941 411 aaKnown RBP18.42■□□□□ 0.54
Syne3-201ENSMUST00000067005 MlecQ6ZQI3 291 aaKnown RBP18.42■□□□□ 0.54
Syne3-201ENSMUST00000067005 Arhgap31A6X8Z5 1425 aa18.42■□□□□ 0.54
Syne3-201ENSMUST00000067005 Tnnt1O88346 262 aa18.42■□□□□ 0.54
Syne3-201ENSMUST00000067005 Mfap1aC0HKD8 439 aaKnown RBP18.41■□□□□ 0.54
Syne3-201ENSMUST00000067005 Mfap1bC0HKD9 439 aaKnown RBP18.41■□□□□ 0.54
Syne3-201ENSMUST00000067005 MecomP14404 1042 aa18.41■□□□□ 0.54
Syne3-201ENSMUST00000067005 Arap1Q4LDD4 1452 aa18.4■□□□□ 0.54
Syne3-201ENSMUST00000067005 Fgd6Q69ZL1 1399 aa18.4■□□□□ 0.54
Syne3-201ENSMUST00000067005 Frmpd1A2AKB4 1549 aa18.4■□□□□ 0.54
Syne3-201ENSMUST00000067005 Mrc2Q64449 1479 aa18.4■□□□□ 0.54
Syne3-201ENSMUST00000067005 Fam163aQ8CAA5 168 aa18.39■□□□□ 0.53
Syne3-201ENSMUST00000067005 Atp6v1dP57746 247 aa18.39■□□□□ 0.53
Syne3-201ENSMUST00000067005 Spryd3E9Q9B3 442 aa18.38■□□□□ 0.53
Syne3-201ENSMUST00000067005 Cabp4Q8VHC5 271 aa18.38■□□□□ 0.53
Syne3-201ENSMUST00000067005 Irx3P81067 507 aa18.37■□□□□ 0.53
Syne3-201ENSMUST00000067005 Ggt6Q6PDE7 497 aa18.37■□□□□ 0.53
Syne3-201ENSMUST00000067005 Iffo2Q8R2V2 512 aa18.37■□□□□ 0.53
Syne3-201ENSMUST00000067005 Ccdc60Q8C4J0 545 aa18.37■□□□□ 0.53
Syne3-201ENSMUST00000067005 Mink1Q9JM52 1308 aa18.37■□□□□ 0.53
Syne3-201ENSMUST00000067005 Ncapd3Q6ZQK0 1506 aa18.36■□□□□ 0.53
Syne3-201ENSMUST00000067005 AU015836B2RUM3 263 aa18.35■□□□□ 0.53
Syne3-201ENSMUST00000067005 G3bp1P97855 465 aaKnown RBP18.35■□□□□ 0.53
Syne3-201ENSMUST00000067005 R3hcc1Q8BSI6 488 aa18.35■□□□□ 0.53
Syne3-201ENSMUST00000067005 Ylpm1Q9R0I7 1386 aaKnown RBP18.35■□□□□ 0.53
Syne3-201ENSMUST00000067005 Arhgap5P97393 1501 aa18.34■□□□□ 0.53
Syne3-201ENSMUST00000067005 Dnai2A2AC93 623 aa18.34■□□□□ 0.53
Syne3-201ENSMUST00000067005 Cd109Q8R422 1442 aa18.33■□□□□ 0.53
Syne3-201ENSMUST00000067005 Clstn1Q9EPL2 979 aa18.33■□□□□ 0.53
Syne3-201ENSMUST00000067005 Gsto1O09131 240 aa18.33■□□□□ 0.52
Syne3-201ENSMUST00000067005 Il16O54824 1322 aa18.32■□□□□ 0.52
Syne3-201ENSMUST00000067005 FanciQ8K368 1330 aa18.32■□□□□ 0.52
Syne3-201ENSMUST00000067005 Trim58Q5NCC9 485 aa18.32■□□□□ 0.52
Syne3-201ENSMUST00000067005 Tiam1Q60610 1591 aa18.32■□□□□ 0.52
Syne3-201ENSMUST00000067005 Pibf1E9Q6K3 756 aa18.32■□□□□ 0.52
Syne3-201ENSMUST00000067005 Esx1O88933 382 aa18.32■□□□□ 0.52
Syne3-201ENSMUST00000067005 Puf60Q3UEB3 564 aaKnown RBP18.32■□□□□ 0.52
Syne3-201ENSMUST00000067005 Myom3A2ABU4 1439 aa18.31■□□□□ 0.52
Syne3-201ENSMUST00000067005 EprsQ8CGC7 1512 aaKnown RBP18.31■□□□□ 0.52
Syne3-201ENSMUST00000067005 Ecm2Q5FW85 670 aa18.3■□□□□ 0.52
Syne3-201ENSMUST00000067005 Dnttip2Q8R2M2 758 aaKnown RBP18.3■□□□□ 0.52
Syne3-201ENSMUST00000067005 Anapc15P60007 132 aa18.3■□□□□ 0.52
Syne3-201ENSMUST00000067005 GorabQ8BRM2 368 aa18.29■□□□□ 0.52
Syne3-201ENSMUST00000067005 Ccdc141E9Q8Q6 1531 aa18.29■□□□□ 0.52
Syne3-201ENSMUST00000067005 CadpsQ80TJ1 1355 aa18.28■□□□□ 0.52
Syne3-201ENSMUST00000067005 Zfp644E9QA22 1323 aa18.28■□□□□ 0.52
Syne3-201ENSMUST00000067005 Brpf1B2RRD7 1212 aa18.28■□□□□ 0.52
Syne3-201ENSMUST00000067005 Top2bQ64511 1612 aa18.28■□□□□ 0.52
Syne3-201ENSMUST00000067005 AqrQ8CFQ3 1481 aaKnown RBP18.27■□□□□ 0.52
Syne3-201ENSMUST00000067005 Chmp3Q9CQ10 224 aa18.27■□□□□ 0.51
Syne3-201ENSMUST00000067005 Pcmtd1P59913 357 aa18.26■□□□□ 0.51
Syne3-201ENSMUST00000067005 PnisrA2AJT4 805 aaKnown RBP18.26■□□□□ 0.51
Syne3-201ENSMUST00000067005 Rpgrip1lQ8CG73 1264 aa18.26■□□□□ 0.51
Syne3-201ENSMUST00000067005 Gm14025A2AP89 1413 aa18.26■□□□□ 0.51
Syne3-201ENSMUST00000067005 PtprkP35822 1457 aa18.26■□□□□ 0.51
Syne3-201ENSMUST00000067005 Erich6bQ9D4S6 220 aa18.25■□□□□ 0.51
Syne3-201ENSMUST00000067005 Gnai1B2RSH2 354 aa18.25■□□□□ 0.51
Syne3-201ENSMUST00000067005 Ccdc146E9Q9F7 977 aa18.25■□□□□ 0.51
Syne3-201ENSMUST00000067005 Gnai3Q9DC51 354 aa18.25■□□□□ 0.51
Syne3-201ENSMUST00000067005 4933402E13RikQ9D4D2 429 aa18.24■□□□□ 0.51
Syne3-201ENSMUST00000067005 Ccdc30Q8BVF4 654 aa18.24■□□□□ 0.51
Syne3-201ENSMUST00000067005 Smc4Q8CG47 1286 aa18.24■□□□□ 0.51
Syne3-201ENSMUST00000067005 Pak3Q61036 559 aa18.23■□□□□ 0.51
Syne3-201ENSMUST00000067005 Map3k5O35099 1380 aa18.23■□□□□ 0.51
Syne3-201ENSMUST00000067005 Nolc1E9Q5C9 702 aaKnown RBP18.23■□□□□ 0.51
Syne3-201ENSMUST00000067005 Atl3Q91YH5 541 aa18.23■□□□□ 0.51
Syne3-201ENSMUST00000067005 Camsap1A2AHC3 1581 aa18.23■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms