RNA–Protein interactions for RNA: snR65

snR65, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR65, Length 100 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR65	snR65	YNL095C	P53932	642 aa		0.51	□□□□□ -2.33
snR65	snR65	URC2	Q04411	772 aa		0.51	□□□□□ -2.33
snR65	snR65	NSE1	Q07913	336 aa		0.51	□□□□□ -2.33
snR65	snR65	MRX4	Q12467	430 aa		0.51	□□□□□ -2.33
snR65	snR65	AFI1	Q99222	893 aa		0.51	□□□□□ -2.33
snR65	snR65	MRP7	P12687	371 aa		0.5	□□□□□ -2.33
snR65	snR65	BYE1	P36106	594 aa		0.5	□□□□□ -2.33
snR65	snR65	YKR015C	P36111	568 aa		0.5	□□□□□ -2.33
snR65	snR65	SLM4	P38247	162 aa		0.5	□□□□□ -2.33
snR65	snR65	EFM1	P38732	585 aa		0.5	□□□□□ -2.33
snR65	snR65	RRG9	P40156	214 aa		0.5	□□□□□ -2.33
snR65	snR65	MOB2	P43563	287 aa		0.5	□□□□□ -2.33
snR65	snR65	YFR054C	P43622	192 aa		0.5	□□□□□ -2.33
snR65	snR65	MRPL19	P53875	158 aa		0.5	□□□□□ -2.33
snR65	snR65	YDR341C	Q05506	607 aa	Known RBP	0.5	□□□□□ -2.33
snR65	snR65	YLH47	Q06493	454 aa		0.5	□□□□□ -2.33
snR65	snR65	MED1	Q12321	566 aa		0.5	□□□□□ -2.33
snR65	snR65	RED1	P14291	827 aa		0.49	□□□□□ -2.33
snR65	snR65	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.49	□□□□□ -2.33	not detected
snR65	snR65	NRG2	P38082	220 aa		0.49	□□□□□ -2.33
snR65	snR65	YIL054W	P40524	105 aa		0.49	□□□□□ -2.33
snR65	snR65	SVL3	Q03088	825 aa	Known RBP	0.49	□□□□□ -2.33
snR65	snR65	IES3	Q12345	250 aa		0.49	□□□□□ -2.33
snR65	snR65	TFC7	Q12415	435 aa		0.49	□□□□□ -2.33
snR65	snR65	TFS1	P14306	219 aa		0.48	□□□□□ -2.33
snR65	snR65	YSC83	P32792	385 aa		0.48	□□□□□ -2.33
snR65	snR65	POP2	P39008	433 aa		0.48	□□□□□ -2.33
snR65	snR65	CGI121	Q03705	181 aa	Known RBP	0.48	□□□□□ -2.33
snR65	snR65	SLM3	Q12093	417 aa		0.48	□□□□□ -2.33
snR65	snR65	RNA1	P11745	407 aa	Known RBP	0.47	□□□□□ -2.33
snR65	snR65	URA10	P30402	227 aa		0.47	□□□□□ -2.33
snR65	snR65	IST2	P38250	946 aa		0.47	□□□□□ -2.33
snR65	snR65	YFR018C	P43599	363 aa		0.47	□□□□□ -2.33
snR65	snR65	DAN1	P47178	298 aa		0.47	□□□□□ -2.33
snR65	snR65	SYF2	P53277	215 aa	Predicted RBP	0.47	□□□□□ -2.33
snR65	snR65	SUR7	P54003	302 aa		0.47	□□□□□ -2.33
snR65	snR65	AEP3	Q12089	606 aa		0.47	□□□□□ -2.33
snR65	snR65	PGA3	Q12746	312 aa	Known RBP	0.47	□□□□□ -2.33
snR65	snR65	VPS63	O13549	108 aa		0.46	□□□□□ -2.34
snR65	snR65	PHO80	P20052	293 aa		0.46	□□□□□ -2.34
snR65	snR65	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.46	□□□□□ -2.34	not detected
snR65	snR65	GPD2	P41911	440 aa	Known RBP	0.46	□□□□□ -2.34
snR65	snR65	MIC19	P43594	170 aa		0.46	□□□□□ -2.34
snR65	snR65	HIT1	P46973	164 aa		0.46	□□□□□ -2.34
snR65	snR65	BNI5	P53890	448 aa	Known RBP	0.46	□□□□□ -2.34
snR65	snR65	TRM82	Q03774	444 aa		0.46	□□□□□ -2.34
snR65	snR65	YHR086W-A	Q3E746	53 aa		0.46	□□□□□ -2.34
snR65	snR65	MRPL20	P22354	195 aa	Predicted RBP	0.45	□□□□□ -2.34
snR65	snR65	PHO91	P27514	894 aa		0.45	□□□□□ -2.34
snR65	snR65	ERV1	P27882	189 aa		0.45	□□□□□ -2.34
snR65	snR65	ITR2	P30606	609 aa		0.45	□□□□□ -2.34
snR65	snR65	DSK2	P48510	373 aa		0.45	□□□□□ -2.34
snR65	snR65	FMP48	P53233	369 aa		0.45	□□□□□ -2.34
snR65	snR65	RTS3	P53289	263 aa		0.45	□□□□□ -2.34
snR65	snR65	CLB6	P32943	380 aa		0.44	□□□□□ -2.34
snR65	snR65	YKL071W	P36086	256 aa		0.44	□□□□□ -2.34
snR65	snR65	CTM1	P38818	585 aa		0.44	□□□□□ -2.34
snR65	snR65	FAD1	P38913	306 aa		0.44	□□□□□ -2.34
snR65	snR65	PAC11	P40960	533 aa		0.44	□□□□□ -2.34
snR65	snR65	YGL118C	P53132	145 aa		0.44	□□□□□ -2.34
snR65	snR65	TAF11	Q04226	346 aa		0.44	□□□□□ -2.34
snR65	snR65	UBX2	Q04228	584 aa		0.44	□□□□□ -2.34
snR65	snR65	YLR456W	Q06199	204 aa		0.44	□□□□□ -2.34
snR65	snR65	RDS3	Q06835	107 aa	Predicted RBP	0.44	□□□□□ -2.34
snR65	snR65	FAR1	P21268	830 aa		0.43	□□□□□ -2.34
snR65	snR65	NOC2	P39744	710 aa	Known RBP	0.43	□□□□□ -2.34
snR65	snR65	DET1	Q99288	334 aa	Known RBP	0.43	□□□□□ -2.34
snR65	snR65	MRPL8	P22353	238 aa		0.42	□□□□□ -2.34
snR65	snR65	RRP7	P25368	297 aa	Predicted RBP	0.42	□□□□□ -2.34
snR65	snR65	URA7	P28274	579 aa	Known RBP	0.42	□□□□□ -2.34
snR65	snR65	RFT1	P38206	574 aa	Predicted RBP	0.42	□□□□□ -2.34
snR65	snR65	RTT102	P53330	157 aa		0.42	□□□□□ -2.34
snR65	snR65	SHS1	Q07657	551 aa		0.42	□□□□□ -2.34
snR65	snR65	ALE1	Q08548	619 aa		0.42	□□□□□ -2.34
snR65	snR65	SSU72	P53538	206 aa	Predicted RBP	0.41	□□□□□ -2.34
snR65	snR65	NOP6	Q07623	225 aa	Known RBP	0.4	□□□□□ -2.35
snR65	snR65	VPS68	Q12016	184 aa		0.4	□□□□□ -2.35
snR65	snR65	UBA3	Q99344	299 aa		0.4	□□□□□ -2.35
snR65	snR65	YMR166C	Q03829	368 aa		0.39	□□□□□ -2.35
snR65	snR65	AAD15	Q08361	143 aa		0.39	□□□□□ -2.35
snR65	snR65	PDE2	P06776	526 aa		0.38	□□□□□ -2.35
snR65	snR65	PEX5	P35056	612 aa		0.38	□□□□□ -2.35
snR65	snR65	SMF2	P38778	549 aa		0.38	□□□□□ -2.35
snR65	snR65	YHR182W	P38870	785 aa		0.38	□□□□□ -2.35
snR65	snR65	LSM4	P40070	187 aa	Known RBP	0.38	□□□□□ -2.35
snR65	snR65	SLM1	P40485	686 aa		0.38	□□□□□ -2.35
snR65	snR65	MIG2	P53035	382 aa		0.38	□□□□□ -2.35
snR65	snR65	YNL040W	P53960	456 aa	Predicted RBP	0.38	□□□□□ -2.35
snR65	snR65	VPS72	Q03388	795 aa		0.38	□□□□□ -2.35
snR65	snR65	RPN8	Q08723	338 aa	Known RBP	0.38	□□□□□ -2.35
snR65	snR65	TY3A-G	Q12173	290 aa		0.38	□□□□□ -2.35
snR65	snR65	TY3A-I	Q99219	290 aa		0.38	□□□□□ -2.35
snR65	snR65	CAB3	P36076	571 aa		0.37	□□□□□ -2.35
snR65	snR65	YHR177W	P38867	453 aa		0.37	□□□□□ -2.35
snR65	snR65	FCY21	P40039	528 aa		0.37	□□□□□ -2.35
snR65	snR65	AQR1	P53943	586 aa		0.37	□□□□□ -2.35
snR65	snR65	DCR2	Q05924	578 aa		0.37	□□□□□ -2.35
snR65	snR65	TAF10	Q12030	206 aa		0.37	□□□□□ -2.35
snR65	snR65	SFI1	Q12369	946 aa		0.37	□□□□□ -2.35
snR65	snR65	CDC42	P19073	191 aa		0.36	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms