RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W RET3P53600 189 aa1.77□□□□□ -2.13
DDR48YMR173W SUR7P54003 302 aa1.77□□□□□ -2.13
DDR48YMR173W SMD1Q02260 146 aaPredicted RBP1.77□□□□□ -2.13
DDR48YMR173W TRM82Q03774 444 aa1.77□□□□□ -2.13
DDR48YMR173W GYL1Q04322 720 aa1.77□□□□□ -2.13
DDR48YMR173W YPR078CQ06813 372 aa1.77□□□□□ -2.13
DDR48YMR173W DIB1Q06819 143 aaPredicted RBP1.77□□□□□ -2.13
DDR48YMR173W YOL029CQ08187 201 aa1.77□□□□□ -2.13
DDR48YMR173W RPN8Q08723 338 aaKnown RBP1.77□□□□□ -2.13
DDR48YMR173W RPN5Q12250 445 aaKnown RBP1.77□□□□□ -2.13
DDR48YMR173W UBA3Q99344 299 aa1.77□□□□□ -2.13
DDR48YMR173W SAL1D6W196 494 aa1.76□□□□□ -2.13
DDR48YMR173W MNL1P38888 796 aa1.76□□□□□ -2.13
DDR48YMR173W BDH1P39714 382 aa1.76□□□□□ -2.13
DDR48YMR173W MMT2Q08970 484 aa1.76□□□□□ -2.13
DDR48YMR173W FRE8Q12209 686 aa1.76□□□□□ -2.13
DDR48YMR173W BGL2P15703 313 aaKnown RBP1.75□□□□□ -2.13
DDR48YMR173W FAR1P21268 830 aa1.75□□□□□ -2.13
DDR48YMR173W SPP381P38282 291 aaPredicted RBP1.75□□□□□ -2.13
DDR48YMR173W YHR182WP38870 785 aa1.75□□□□□ -2.13
DDR48YMR173W SCC4P40090 624 aa1.75□□□□□ -2.13
DDR48YMR173W LYS12P40495 371 aaKnown RBP1.75□□□□□ -2.13
DDR48YMR173W EFM4P40516 257 aa1.75□□□□□ -2.13
DDR48YMR173W LCB2P40970 561 aa1.75□□□□□ -2.13
DDR48YMR173W RSC1P53236 928 aa1.75□□□□□ -2.13
DDR48YMR173W VPS9P54787 451 aa1.75□□□□□ -2.13
DDR48YMR173W DET1Q99288 334 aaKnown RBP1.75□□□□□ -2.13
DDR48YMR173W SCH9P11792 824 aaKnown RBP1.74□□□□□ -2.13
DDR48YMR173W UTR5P32630 166 aa1.74□□□□□ -2.13
DDR48YMR173W PEX5P35056 612 aa1.74□□□□□ -2.13
DDR48YMR173W LRP1P38801 184 aaKnown RBP1.74□□□□□ -2.13
DDR48YMR173W RRG9P40156 214 aa1.74□□□□□ -2.13
DDR48YMR173W YDL211CQ12121 372 aa1.74□□□□□ -2.13
DDR48YMR173W RPS23AP0CX29 145 aaKnown RBP1.73□□□□□ -2.13
DDR48YMR173W RPS23BP0CX30 145 aa1.73□□□□□ -2.13
DDR48YMR173W CPT1P17898 393 aa1.73□□□□□ -2.13
DDR48YMR173W MNE1P24720 663 aa1.73□□□□□ -2.13
DDR48YMR173W ALK2P32789 676 aaPredicted RBP1.73□□□□□ -2.13
DDR48YMR173W TKL2P33315 681 aa1.73□□□□□ -2.13
DDR48YMR173W ECM14P38836 430 aa1.73□□□□□ -2.13
DDR48YMR173W MIC19P43594 170 aa1.73□□□□□ -2.13
DDR48YMR173W YJL055WP47044 245 aa1.73□□□□□ -2.13
DDR48YMR173W SXM1Q04175 944 aaKnown RBP1.73□□□□□ -2.13
DDR48YMR173W PRP46Q12417 451 aaPredicted RBP1.73□□□□□ -2.13
DDR48YMR173W ERP4Q12450 207 aa1.73□□□□□ -2.13
DDR48YMR173W PAR32Q12515 295 aaKnown RBP1.73□□□□□ -2.13
DDR48YMR173W DFM1Q12743 341 aaKnown RBP1.73□□□□□ -2.13
DDR48YMR173W URA10P30402 227 aa1.72□□□□□ -2.13
DDR48YMR173W MSK1P32048 576 aa1.72□□□□□ -2.13
DDR48YMR173W YMR262WP38430 313 aa1.72□□□□□ -2.13
DDR48YMR173W GDI1P39958 451 aaKnown RBP1.72□□□□□ -2.13
DDR48YMR173W HSH155P49955 971 aaKnown RBP1.72□□□□□ -2.13
DDR48YMR173W ECM19Q06011 112 aa1.72□□□□□ -2.13
DDR48YMR173W YFH1Q07540 174 aa1.72□□□□□ -2.13
DDR48YMR173W FLO11P08640 1367 aa1.72□□□□□ -2.13
DDR48YMR173W VPS63O13549 108 aa1.71□□□□□ -2.14
DDR48YMR173W RPS14AP06367 137 aaKnown RBP1.71□□□□□ -2.14
DDR48YMR173W HPR1P17629 752 aaKnown RBP1.71□□□□□ -2.14
DDR48YMR173W PSO2P30620 661 aa1.71□□□□□ -2.14
DDR48YMR173W MDL1P33310 695 aa1.71□□□□□ -2.14
DDR48YMR173W YBL028CP38202 106 aa1.71□□□□□ -2.14
DDR48YMR173W TAE1P38340 232 aa1.71□□□□□ -2.14
DDR48YMR173W YPT35P38815 214 aaKnown RBP1.71□□□□□ -2.14
DDR48YMR173W RPS14BP39516 138 aaKnown RBP1.71□□□□□ -2.14
DDR48YMR173W YFR018CP43599 363 aa1.71□□□□□ -2.14
DDR48YMR173W YJR030CP47101 745 aa1.71□□□□□ -2.14
DDR48YMR173W MLC1P53141 149 aa1.71□□□□□ -2.14
DDR48YMR173W LST7P53237 242 aa1.71□□□□□ -2.14
DDR48YMR173W UTP15Q04305 513 aaKnown RBP1.71□□□□□ -2.14
DDR48YMR173W RPS16AP0CX51 143 aaKnown RBP1.7□□□□□ -2.14
DDR48YMR173W RPS16BP0CX52 143 aaKnown RBP1.7□□□□□ -2.14
DDR48YMR173W DBR1P24309 405 aaKnown RBP1.7□□□□□ -2.14
DDR48YMR173W GRR1P24814 1151 aa1.7□□□□□ -2.14
DDR48YMR173W RPB9P27999 122 aa1.7□□□□□ -2.14
DDR48YMR173W YKL071WP36086 256 aa1.7□□□□□ -2.14
DDR48YMR173W IST2P38250 946 aa1.7□□□□□ -2.14
DDR48YMR173W YGL088WP53151 121 aa1.7□□□□□ -2.14
DDR48YMR173W SGT2Q12118 346 aaKnown RBP1.7□□□□□ -2.14
DDR48YMR173W INO2P26798 304 aa1.69□□□□□ -2.14
DDR48YMR173W MED8P38304 223 aa1.69□□□□□ -2.14
DDR48YMR173W LSG1P53145 640 aaKnown RBP1.69□□□□□ -2.14
DDR48YMR173W YPL113CQ02961 396 aa1.69□□□□□ -2.14
DDR48YMR173W CSI1Q04368 295 aa1.69□□□□□ -2.14
DDR48YMR173W YOL075CQ08234 1294 aa1.69□□□□□ -2.14
DDR48YMR173W TAF10Q12030 206 aa1.69□□□□□ -2.14
DDR48YMR173W PUP2P32379 260 aa1.68□□□□□ -2.14
DDR48YMR173W PPQ1P32945 549 aa1.68□□□□□ -2.14
DDR48YMR173W PCH2P38126 564 aa1.68□□□□□ -2.14
DDR48YMR173W SEC28P40509 296 aaKnown RBP1.68□□□□□ -2.14
DDR48YMR173W EPL1P43572 832 aa1.68□□□□□ -2.14
DDR48YMR173W RRB1Q04225 511 aaKnown RBP1.68□□□□□ -2.14
DDR48YMR173W GTO3Q04806 366 aa1.68□□□□□ -2.14
DDR48YMR173W SPH1Q06160 661 aa1.68□□□□□ -2.14
DDR48YMR173W PEX27Q08580 376 aa1.68□□□□□ -2.14
DDR48YMR173W YPL264CQ08980 353 aa1.68□□□□□ -2.14
DDR48YMR173W AIM45Q12480 344 aaKnown RBP1.68□□□□□ -2.14
DDR48YMR173W FSH3Q99369 266 aa1.68□□□□□ -2.14
DDR48YMR173W TDH2P00358 332 aaKnown RBP1.67□□□□□ -2.14
DDR48YMR173W TDH3P00359 332 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
DDR48YMR173W RPL6BP05739 176 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms