RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR1	YKR101W	MUD1	P32605	298 aa	Known RBP	4.08	□□□□□ -1.76
SIR1	YKR101W	YBP1	P38315	674 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	MTC6	P38849	526 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	SEC27	P41811	889 aa	Known RBP	4.08	□□□□□ -1.76
SIR1	YKR101W	AGX1	P43567	385 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	IBD2	P53892	351 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	CSI1	Q04368	295 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	CSM3	Q04659	317 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	YLL007C	Q07799	665 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	FMP16	Q12497	93 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	YCR024C-B	Q3E7Z8	88 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	TAD3	Q9URQ3	322 aa		4.08	□□□□□ -1.76
SIR1	YKR101W	CFT1	Q06632	1357 aa	Known RBP	4.08	□□□□□ -1.76
SIR1	YKR101W	SPS22	P25380	463 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	ECT1	P33412	323 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	DSE1	P40077	573 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	HER2	Q03557	464 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	MDM36	Q06820	579 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	KRE5	P22023	1365 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	MRP4	P32902	394 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	RPC25	P35718	212 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	LOH1	P47055	219 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	YGL242C	P53066	181 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	RTT103	Q05543	409 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	YRM1	Q12340	786 aa		4.07	□□□□□ -1.76
SIR1	YKR101W	RAD9	P14737	1309 aa		4.06	□□□□□ -1.76
SIR1	YKR101W	HEM15	P16622	393 aa		4.06	□□□□□ -1.76
SIR1	YKR101W	AGA1	P32323	725 aa		4.06	□□□□□ -1.76
SIR1	YKR101W	SMC2	P38989	1170 aa	Known RBP	4.06	□□□□□ -1.76
SIR1	YKR101W	INA22	P40576	216 aa		4.06	□□□□□ -1.76
SIR1	YKR101W	KEG1	P43614	200 aa		4.06	□□□□□ -1.76
SIR1	YKR101W	MPP6	P53725	186 aa	Predicted RBP	4.06	□□□□□ -1.76
SIR1	YKR101W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.06	□□□□□ -1.76
SIR1	YKR101W	TDH1	P00360	332 aa	Known RBP	4.05	□□□□□ -1.76
SIR1	YKR101W	GPI12	P23797	304 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	VMA5	P31412	392 aa	Known RBP	4.05	□□□□□ -1.76
SIR1	YKR101W	NCA3	P46955	337 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	FMP33	P46998	180 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	TAF6	P53040	516 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	SHE10	P53075	577 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	MRM2	P53123	320 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	YNL050C	P53952	270 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	RVB1	Q03940	463 aa	Known RBP	4.05	□□□□□ -1.76
SIR1	YKR101W	TY3A-G	Q12173	290 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	YPR1	Q12458	312 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	TY3A-I	Q99219	290 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	BCK1	Q01389	1478 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	TRP1	P00912	224 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	IME2	P32581	645 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	RBG1	P39729	369 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	SAD1	P43589	448 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	LCB3	P47013	409 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	TRF5	P48561	642 aa	Known RBP	4.05	□□□□□ -1.76
SIR1	YKR101W	NUP84	P52891	726 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	MTM1	P53320	366 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	PXR1	P53335	271 aa	Predicted RBP	4.05	□□□□□ -1.76
SIR1	YKR101W	MSO1	P53604	210 aa	Known RBP	4.05	□□□□□ -1.76
SIR1	YKR101W	TRM112	P53738	135 aa	Predicted RBP	4.05	□□□□□ -1.76
SIR1	YKR101W	TDA1	Q03533	586 aa		4.05	□□□□□ -1.76
SIR1	YKR101W	SAL1	D6W196	494 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	CHA1	P25379	360 aa	Known RBP	4.04	□□□□□ -1.76
SIR1	YKR101W	SPR1	P32603	445 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	DTR1	P38125	572 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	COX14	P39103	70 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	YJL213W	P40896	331 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	EMC2	P47133	292 aa	Known RBP	4.04	□□□□□ -1.76
SIR1	YKR101W	YNL260C	P53846	198 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	NUP116	Q02630	1113 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	YLR108C	Q12259	485 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	RGT2	Q12300	763 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	APC2	Q12440	853 aa		4.04	□□□□□ -1.76
SIR1	YKR101W	COT1	P32798	439 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	MMS21	P38632	267 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	SMF2	P38778	549 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	YPT35	P38815	214 aa	Known RBP	4.03	□□□□□ -1.76
SIR1	YKR101W	SLM1	P40485	686 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	YIL067C	P40514	678 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	YFL040W	P43562	540 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	BIO3	P50277	480 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	BIO4	P53630	237 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	RPL5	P26321	297 aa	Known RBP	4.03	□□□□□ -1.76
SIR1	YKR101W	KAR9	P32526	644 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	YHR182W	P38870	785 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	MDM31	P38880	579 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	YJR030C	P47101	745 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	HNT3	Q08702	217 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	YCL021W-A	Q96VH3	125 aa		4.03	□□□□□ -1.76
SIR1	YKR101W	PRM5	P40476	318 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	IDP2	P41939	412 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	MKC7	P53379	596 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	UBX2	Q04228	584 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	ALE1	Q08548	619 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	PRP46	Q12417	451 aa	Predicted RBP	4.02	□□□□□ -1.77
SIR1	YKR101W	YER078W-A	Q3E7A2	54 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	FRS2	P15625	503 aa	Known RBP	4.02	□□□□□ -1.77
SIR1	YKR101W	CPR4	P25334	318 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	DCC1	P25559	380 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	CSM1	P25651	190 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	ERG9	P29704	444 aa		4.02	□□□□□ -1.77
SIR1	YKR101W	CIN2	P46670	268 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms