RNA–Protein interactions for RNA: YDR396W

YDR396W, Transcript of Dubious open reading frame unlikely to encode a functional protein, yeast

Gene YDR396W, Length 501 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR396W	YDR396W	LSM8	P47093	109 aa	Known RBP	5.19	□□□□□ -1.58
YDR396W	YDR396W	PUS2	P53167	370 aa		5.19	□□□□□ -1.58
YDR396W	YDR396W	YGR168C	P53293	376 aa		5.19	□□□□□ -1.58
YDR396W	YDR396W	IBD2	P53892	351 aa		5.19	□□□□□ -1.58
YDR396W	YDR396W	RHO3	Q00245	231 aa	Known RBP	5.19	□□□□□ -1.58
YDR396W	YDR396W	SSK1	Q07084	712 aa		5.19	□□□□□ -1.58
YDR396W	YDR396W	RCL1	Q08096	367 aa	Predicted RBP	5.19	□□□□□ -1.58
YDR396W	YDR396W	POM33	Q12164	279 aa		5.19	□□□□□ -1.58
YDR396W	YDR396W	JLP1	Q12358	412 aa		5.19	□□□□□ -1.58
YDR396W	YDR396W	RMD5	Q12508	421 aa		5.19	□□□□□ -1.58
YDR396W	YDR396W	TRM732	Q03496	1420 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	HCM1	P25364	564 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	LRE1	P25579	583 aa	Known RBP	5.18	□□□□□ -1.58
YDR396W	YDR396W	UBC8	P28263	218 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	YKL151C	P36059	337 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	BNA4	P38169	460 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	MRX3	P38172	270 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	YFR057W	P43625	151 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	GPI14	P47088	403 aa	Known RBP	5.18	□□□□□ -1.58
YDR396W	YDR396W	SPT20	P50875	604 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	YTP1	P53584	459 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	YMR187C	Q03236	431 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	MAK3	Q03503	176 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	PKR1	Q03880	122 aa	Known RBP	5.18	□□□□□ -1.58
YDR396W	YDR396W	ALG6	Q12001	544 aa	Known RBP	5.18	□□□□□ -1.58
YDR396W	YDR396W	YLR050C	Q12155	161 aa	Known RBP	5.18	□□□□□ -1.58
YDR396W	YDR396W	ATP14	Q12349	124 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	TY1A-NL1	Q12391	440 aa	Known RBP	5.18	□□□□□ -1.58
YDR396W	YDR396W	POM34	Q12445	299 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	EFG1	Q3E705	233 aa	Known RBP	5.18	□□□□□ -1.58
YDR396W	YDR396W	RPO31	P04051	1460 aa		5.18	□□□□□ -1.58
YDR396W	YDR396W	HIS1	P00498	297 aa	Known RBP	5.17	□□□□□ -1.58
YDR396W	YDR396W	MET2	P08465	486 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	TUB3	P09734	445 aa	Known RBP	5.17	□□□□□ -1.58
YDR396W	YDR396W	SEC22	P22214	214 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	MGT1	P26188	188 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	HOM6	P31116	359 aa	Known RBP	5.17	□□□□□ -1.58
YDR396W	YDR396W	NUP2	P32499	720 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	SGE1	P33335	543 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	TVP38	P36164	337 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	RRN10	P38204	145 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	PRS2	P38620	318 aa	Known RBP	5.17	□□□□□ -1.58
YDR396W	YDR396W	PTC7	P38797	343 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	ARO9	P38840	513 aa	Predicted RBP	5.17	□□□□□ -1.58
YDR396W	YDR396W	YAR028W	P39548	234 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	GTS1	P40956	396 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	YGR210C	P42942	411 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	PRY1	P47032	299 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	YJL016W	P47072	561 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	HOC1	P47124	396 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	AZR1	P50080	613 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	MIC26	P50087	233 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	UFD1	P53044	361 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	ROG1	P53118	685 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	GTR2	P53290	341 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	TPS1	Q00764	495 aa	Known RBP	5.17	□□□□□ -1.58
YDR396W	YDR396W	SRT1	Q03175	343 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	YMR279C	Q03263	540 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	PLM2	Q04383	521 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	COQ11	Q05892	277 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	PRP11	Q07350	266 aa	Predicted RBP	5.17	□□□□□ -1.58
YDR396W	YDR396W	YDL086W	Q07505	273 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	PLB3	Q08108	686 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	GEP3	Q08622	556 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	AFT2	Q08957	416 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	SRL2	Q12020	392 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	YOR012W	Q12351	137 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	YOP1	Q12402	180 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	YIR021W-A	Q3E739	70 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	YPR053C	Q6Q5F3	151 aa		5.17	□□□□□ -1.58
YDR396W	YDR396W	YOR1	P53049	1477 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	YDR157W	A0A023PZE8	133 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	ADE5,7	P07244	802 aa	Known RBP	5.16	□□□□□ -1.58
YDR396W	YDR396W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
YDR396W	YDR396W	SLY1	P22213	666 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	PRE7	P23724	241 aa	Known RBP	5.16	□□□□□ -1.58
YDR396W	YDR396W	FUB1	P25659	250 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	YIM1	P28625	365 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	IES6	P32617	166 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	YBR144C	P34215	104 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	SDH8	P38345	138 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	SAF1	P38352	637 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	TDA11	P38854	504 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	ATG7	P38862	630 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	CCT4	P39078	528 aa	Known RBP	5.16	□□□□□ -1.58
YDR396W	YDR396W	ICP55	P40051	511 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	LAS21	P40367	830 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	COA1	P40452	197 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	MAM33	P40513	266 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	SWP82	P43554	623 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	LYS20	P48570	428 aa	Known RBP	5.16	□□□□□ -1.58
YDR396W	YDR396W	RBL2	P48606	106 aa	Known RBP	5.16	□□□□□ -1.58
YDR396W	YDR396W	NBP1	P52919	319 aa	Predicted RBP	5.16	□□□□□ -1.58
YDR396W	YDR396W	USE1	P53146	245 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	KIN4	Q01919	800 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	GIP3	Q03016	1276 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	HER2	Q03557	464 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	AIM34	Q03673	198 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	YDR018C	Q12185	396 aa		5.16	□□□□□ -1.58
YDR396W	YDR396W	YDR215C	Q12240	137 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms