RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	COX3	P00420	269 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	RPL6B	P05739	176 aa	Known RBP	2.26	□□□□□ -2.05
RSA1	YPL193W	LEU4	P06208	619 aa	Known RBP	2.26	□□□□□ -2.05
RSA1	YPL193W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.26	□□□□□ -2.05	not detected
RSA1	YPL193W	CBS1	P14066	229 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	SEC63	P14906	663 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	YCR051W	P25631	222 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	PPQ1	P32945	549 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	RPC37	P36121	282 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	SMF1	P38925	575 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	PTI1	P39927	425 aa	Predicted RBP	2.26	□□□□□ -2.05
RSA1	YPL193W	MET18	P40469	1032 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	SHQ1	P40486	507 aa	Predicted RBP	2.26	□□□□□ -2.05
RSA1	YPL193W	ZIM17	P42844	174 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	AGX1	P43567	385 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	HSH155	P49955	971 aa	Known RBP	2.26	□□□□□ -2.05
RSA1	YPL193W	SWS2	P53937	143 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	RPL6A	Q02326	176 aa	Known RBP	2.26	□□□□□ -2.05
RSA1	YPL193W	YRM1	Q12340	786 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	NAG1	Q8TGN9	163 aa		2.26	□□□□□ -2.05
RSA1	YPL193W	UBR1	P19812	1950 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	RPS8A	P0CX39	200 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	RPS8B	P0CX40	200 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	MRP13	P12686	339 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	MER1	P16523	270 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	ARF2	P19146	181 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	DBP3	P20447	523 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	DAL82	P21705	255 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	SPS22	P25380	463 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	BUB3	P26449	341 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	URA7	P28274	579 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	EFB1	P32471	206 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	CYM1	P32898	989 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	SUR1	P33300	382 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	LTV1	P34078	463 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	SRB2	P34162	210 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	YUH1	P35127	236 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	MRPL40	P36534	297 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	PCH2	P38126	564 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	OPY1	P38271	328 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	MSG5	P38590	489 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	CTM1	P38818	585 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	YDR089W	P38966	869 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	ISC1	P40015	477 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	NAS2	P40555	220 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	UFE1	P41834	346 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	AIP1	P46680	615 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	CIS3	P47001	227 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	LIA1	P47120	325 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	SSN8	P47821	323 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	COQ5	P49017	307 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	SHE4	P51534	789 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	FLC3	P53121	802 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	YNR068C	P53754	272 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	PRO2	P54885	456 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	TRM82	Q03774	444 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	YML096W	Q04489	525 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	ARV1	Q06541	321 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	YEH1	Q07804	573 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	SAM4	Q08985	325 aa	Known RBP	2.25	□□□□□ -2.05
RSA1	YPL193W	PSY3	Q12318	242 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	YJR112W-A	Q3E743	109 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	NBL1	Q3E7Y6	73 aa		2.25	□□□□□ -2.05
RSA1	YPL193W	IPP1	P00817	287 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	MATALPHA2	P0CY08	210 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	HMLALPHA2	P0CY09	210 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	RPB4	P20433	221 aa	Predicted RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	MRPL25	P23369	157 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	YCR100C	P25606	316 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	PHO91	P27514	894 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	CIN8	P27895	1000 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	MUD1	P32605	298 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	REC114	P32841	428 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	MNS1	P32906	549 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	ARC19	P33204	171 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	MIX23	P38162	196 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	WSS1	P38838	269 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	PEX18	P38855	283 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	SEC9	P40357	651 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	SER33	P40510	469 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	EFM4	P40516	257 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	MET28	P40573	187 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	GCN20	P43535	752 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	CAK1	P43568	368 aa	Predicted RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	TCB2	P48231	1178 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	IMD4	P50094	524 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	PDR16	P53860	351 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	FIN1	Q03898	291 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	RTN1	Q04947	295 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	RQC1	Q05468	723 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	CUR1	Q06469	252 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	NOP6	Q07623	225 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	DDC1	Q08949	612 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	RPN5	Q12250	445 aa	Known RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	GPM3	Q12326	303 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	PFK27	Q12471	397 aa	Predicted RBP	2.24	□□□□□ -2.05
RSA1	YPL193W	AVL9	Q12500	764 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	YOL159C-A	Q3E769	90 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	YBL111C	Q3E7Y5	667 aa		2.24	□□□□□ -2.05
RSA1	YPL193W	AFI1	Q99222	893 aa		2.24	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms