RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W AIM24P47127 394 aa3.94□□□□□ -1.78
YML040WYML040W TRF5P48561 642 aaKnown RBP3.94□□□□□ -1.78
YML040WYML040W PNC1P53184 216 aaKnown RBP3.94□□□□□ -1.78
YML040WYML040W MTQ1P53944 314 aa3.94□□□□□ -1.78
YML040WYML040W YLR413WQ06689 675 aa3.94□□□□□ -1.78
YML040WYML040W TMS1Q12116 473 aa3.94□□□□□ -1.78
YML040WYML040W DCP1Q12517 231 aaPredicted RBP3.94□□□□□ -1.78
YML040WYML040W HHF1P02309 103 aaKnown RBP3.93□□□□□ -1.78
YML040WYML040W GAL7P08431 366 aa3.93□□□□□ -1.78
YML040WYML040W MSI1P13712 422 aa3.93□□□□□ -1.78
YML040WYML040W UGA1P17649 471 aa3.93□□□□□ -1.78
YML040WYML040W DCC1P25559 380 aa3.93□□□□□ -1.78
YML040WYML040W ERG9P29704 444 aa3.93□□□□□ -1.78
YML040WYML040W MYO3P36006 1272 aa3.93□□□□□ -1.78
YML040WYML040W YKL162CP36052 402 aa3.93□□□□□ -1.78
YML040WYML040W RBG1P39729 369 aa3.93□□□□□ -1.78
YML040WYML040W PTI1P39927 425 aaPredicted RBP3.93□□□□□ -1.78
YML040WYML040W INA22P40576 216 aa3.93□□□□□ -1.78
YML040WYML040W MST27P53176 234 aa3.93□□□□□ -1.78
YML040WYML040W ERV41Q04651 352 aa3.93□□□□□ -1.78
YML040WYML040W YPR091CQ06833 770 aa3.93□□□□□ -1.78
YML040WYML040W ALE1Q08548 619 aa3.93□□□□□ -1.78
YML040WYML040W YOR387CQ08910 206 aa3.93□□□□□ -1.78
YML040WYML040W FCY22Q12119 530 aa3.93□□□□□ -1.78
YML040WYML040W SUP35P05453 685 aaKnown RBP3.92□□□□□ -1.78
YML040WYML040W RPB5P20434 215 aa3.92□□□□□ -1.78
YML040WYML040W CSE2P33308 149 aa3.92□□□□□ -1.78
YML040WYML040W ANR2P36090 516 aaPredicted RBP3.92□□□□□ -1.78
YML040WYML040W IML3P38265 245 aa3.92□□□□□ -1.78
YML040WYML040W MMS21P38632 267 aa3.92□□□□□ -1.78
YML040WYML040W YHR182WP38870 785 aa3.92□□□□□ -1.78
YML040WYML040W FET3P38993 636 aa3.92□□□□□ -1.78
YML040WYML040W UTP25P40498 721 aaKnown RBP3.92□□□□□ -1.78
YML040WYML040W AIP1P46680 615 aaKnown RBP3.92□□□□□ -1.78
YML040WYML040W LOH1P47055 219 aa3.92□□□□□ -1.78
YML040WYML040W SCS3P53012 380 aa3.92□□□□□ -1.78
YML040WYML040W VOA1P53262 265 aa3.92□□□□□ -1.78
YML040WYML040W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
YML040WYML040W SLM3Q12093 417 aa3.92□□□□□ -1.78
YML040WYML040W PCL9Q12477 304 aa3.92□□□□□ -1.78
YML040WYML040W CAR2P07991 424 aaKnown RBP3.91□□□□□ -1.78
YML040WYML040W SAR1P20606 190 aaKnown RBP3.91□□□□□ -1.78
YML040WYML040W YUR1P26725 428 aa3.91□□□□□ -1.78
YML040WYML040W NAM9P27929 486 aa3.91□□□□□ -1.78
YML040WYML040W ARO2P28777 376 aaKnown RBP3.91□□□□□ -1.78
YML040WYML040W PAD1P33751 242 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
YML040WYML040W YBL059WP34224 193 aa3.91□□□□□ -1.78
YML040WYML040W YPT35P38815 214 aaKnown RBP3.91□□□□□ -1.78
YML040WYML040W PTH1P38876 190 aaKnown RBP3.91□□□□□ -1.78
YML040WYML040W VPS45P38932 577 aa3.91□□□□□ -1.78
YML040WYML040W MAM33P40513 266 aa3.91□□□□□ -1.78
YML040WYML040W MEP2P41948 499 aa3.91□□□□□ -1.78
YML040WYML040W BNS1P50084 137 aa3.91□□□□□ -1.78
YML040WYML040W TAF6P53040 516 aa3.91□□□□□ -1.78
YML040WYML040W YGL185CP53100 379 aa3.91□□□□□ -1.78
YML040WYML040W LSG1P53145 640 aaKnown RBP3.91□□□□□ -1.78
YML040WYML040W ALF1P53904 254 aa3.91□□□□□ -1.78
YML040WYML040W RTN1Q04947 295 aaKnown RBP3.91□□□□□ -1.78
YML040WYML040W MFG1Q07684 458 aa3.91□□□□□ -1.78
YML040WYML040W TLG2Q08144 397 aa3.91□□□□□ -1.78
YML040WYML040W YDL199CQ12407 687 aa3.91□□□□□ -1.78
YML040WYML040W MRPL23Q12487 163 aaPredicted RBP3.91□□□□□ -1.78
YML040WYML040W PHO2P07269 559 aa3.9□□□□□ -1.79
YML040WYML040W MEK1P24719 497 aaPredicted RBP3.9□□□□□ -1.79
YML040WYML040W CPR3P25719 182 aa3.9□□□□□ -1.79
YML040WYML040W HXT1P32465 570 aa3.9□□□□□ -1.79
YML040WYML040W RAD23P32628 398 aaKnown RBP3.9□□□□□ -1.79
YML040WYML040W YKL070WP36087 169 aa3.9□□□□□ -1.79
YML040WYML040W YKR015CP36111 568 aa3.9□□□□□ -1.79
YML040WYML040W ECM8P38246 354 aa3.9□□□□□ -1.79
YML040WYML040W NDT80P38830 627 aa3.9□□□□□ -1.79
YML040WYML040W YHR131CP38835 850 aa3.9□□□□□ -1.79
YML040WYML040W PAN6P40459 309 aa3.9□□□□□ -1.79
YML040WYML040W PXR1P53335 271 aaPredicted RBP3.9□□□□□ -1.79
YML040WYML040W IMP4P53941 290 aaKnown RBP3.9□□□□□ -1.79
YML040WYML040W RVB1Q03940 463 aaKnown RBP3.9□□□□□ -1.79
YML040WYML040W APC4Q04601 652 aa3.9□□□□□ -1.79
YML040WYML040W HRI1Q05905 244 aaKnown RBP3.9□□□□□ -1.79
YML040WYML040W RIF2Q06208 395 aa3.9□□□□□ -1.79
YML040WYML040W MCT1Q12283 360 aa3.9□□□□□ -1.79
YML040WYML040W LDB17Q12342 491 aa3.9□□□□□ -1.79
YML040WYML040W UBA3Q99344 299 aa3.9□□□□□ -1.79
YML040WYML040W SAL1D6W196 494 aa3.89□□□□□ -1.79
YML040WYML040W VMA5P31412 392 aaKnown RBP3.89□□□□□ -1.79
YML040WYML040W HAC1P41546 238 aa3.89□□□□□ -1.79
YML040WYML040W YFL040WP43562 540 aa3.89□□□□□ -1.79
YML040WYML040W YJR030CP47101 745 aa3.89□□□□□ -1.79
YML040WYML040W GTO1P48239 356 aa3.89□□□□□ -1.79
YML040WYML040W YGR168CP53293 376 aa3.89□□□□□ -1.79
YML040WYML040W MKC7P53379 596 aa3.89□□□□□ -1.79
YML040WYML040W UBX2Q04228 584 aa3.89□□□□□ -1.79
YML040WYML040W YHC1Q05900 231 aaKnown RBP3.89□□□□□ -1.79
YML040WYML040W BUR2Q05949 395 aa3.89□□□□□ -1.79
YML040WYML040W DNL4Q08387 944 aaPredicted RBP3.89□□□□□ -1.79
YML040WYML040W DAL2P25335 343 aa3.88□□□□□ -1.79
YML040WYML040W ACB1P31787 87 aa3.88□□□□□ -1.79
YML040WYML040W RCK2P38623 610 aa3.88□□□□□ -1.79
YML040WYML040W SMF2P38778 549 aa3.88□□□□□ -1.79
YML040WYML040W ATG18P43601 500 aa3.88□□□□□ -1.79
YML040WYML040W CLD1P53264 445 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms