RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C ALG11P53954 548 aaKnown RBP4.03□□□□□ -1.76
SRB5YGR104C IDP3P53982 420 aaKnown RBP4.03□□□□□ -1.76
SRB5YGR104C SPP2Q02521 185 aa4.03□□□□□ -1.76
SRB5YGR104C STD1Q02794 444 aa4.03□□□□□ -1.76
SRB5YGR104C IZH1Q03419 316 aa4.03□□□□□ -1.76
SRB5YGR104C CSM3Q04659 317 aa4.03□□□□□ -1.76
SRB5YGR104C RRP45Q05636 305 aaKnown RBP4.03□□□□□ -1.76
SRB5YGR104C BSP1Q06604 576 aa4.03□□□□□ -1.76
SRB5YGR104C MRPL35Q06678 367 aa4.03□□□□□ -1.76
SRB5YGR104C SHS1Q07657 551 aa4.03□□□□□ -1.76
SRB5YGR104C MFG1Q07684 458 aa4.03□□□□□ -1.76
SRB5YGR104C COS7Q07788 383 aa4.03□□□□□ -1.76
SRB5YGR104C MED2Q12124 431 aa4.03□□□□□ -1.76
SRB5YGR104C PER33Q12144 273 aa4.03□□□□□ -1.76
SRB5YGR104C YPL150WQ12152 901 aa4.03□□□□□ -1.76
SRB5YGR104C ATP16Q12165 160 aa4.03□□□□□ -1.76
SRB5YGR104C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SRB5YGR104C YKL183C-AQ3E765 70 aa4.03□□□□□ -1.76
SRB5YGR104C UBA3Q99344 299 aa4.03□□□□□ -1.76
SRB5YGR104C CAR1P00812 333 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C ATP1P07251 545 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C DST1P07273 309 aa4.02□□□□□ -1.77
SRB5YGR104C RPS16AP0CX51 143 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C RPS16BP0CX52 143 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C HPR1P17629 752 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C PPH22P23595 377 aa4.02□□□□□ -1.77
SRB5YGR104C CPR4P25334 318 aa4.02□□□□□ -1.77
SRB5YGR104C ERG9P29704 444 aa4.02□□□□□ -1.77
SRB5YGR104C KAR9P32526 644 aa4.02□□□□□ -1.77
SRB5YGR104C YBL010CP32788 280 aa4.02□□□□□ -1.77
SRB5YGR104C COS9P36034 407 aa4.02□□□□□ -1.77
SRB5YGR104C PRS4P38063 326 aaPredicted RBP4.02□□□□□ -1.77
SRB5YGR104C YPK3P38070 525 aa4.02□□□□□ -1.77
SRB5YGR104C ECM10P39987 644 aa4.02□□□□□ -1.77
SRB5YGR104C YNL194CP40169 301 aa4.02□□□□□ -1.77
SRB5YGR104C VHS2P40463 436 aa4.02□□□□□ -1.77
SRB5YGR104C SCD6P45978 349 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SRB5YGR104C IRC8P47046 822 aa4.02□□□□□ -1.77
SRB5YGR104C STE24P47154 453 aa4.02□□□□□ -1.77
SRB5YGR104C ASN2P49090 572 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C CWC25P53854 179 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C TMA20P89886 181 aaPredicted RBP4.02□□□□□ -1.77
SRB5YGR104C UBP16Q02863 499 aa4.02□□□□□ -1.77
SRB5YGR104C ARR3Q06598 404 aa4.02□□□□□ -1.77
SRB5YGR104C TMS1Q12116 473 aa4.02□□□□□ -1.77
SRB5YGR104C TPT1Q12272 230 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C RDL1Q12305 139 aaKnown RBP4.02□□□□□ -1.77
SRB5YGR104C PRP46Q12417 451 aaPredicted RBP4.02□□□□□ -1.77
SRB5YGR104C WIP1Q2V2P8 89 aa4.02□□□□□ -1.77
SRB5YGR104C TSC11P40061 1430 aa4.02□□□□□ -1.77
SRB5YGR104C ADH2P00331 348 aaKnown RBP4.01□□□□□ -1.77
SRB5YGR104C YBR121C-AP0C5L4 52 aa4.01□□□□□ -1.77
SRB5YGR104C AQY1P0CD91 305 aa4.01□□□□□ -1.77
SRB5YGR104C MRP13P12686 339 aa4.01□□□□□ -1.77
SRB5YGR104C PDA1P16387 420 aaKnown RBP4.01□□□□□ -1.77
SRB5YGR104C RPO26P20435 155 aa4.01□□□□□ -1.77
SRB5YGR104C URE2P23202 354 aaKnown RBP4.01□□□□□ -1.77
SRB5YGR104C PTC6P25646 442 aa4.01□□□□□ -1.77
SRB5YGR104C NDC1P32500 655 aa4.01□□□□□ -1.77
SRB5YGR104C RAD5P32849 1169 aaPredicted RBP4.01□□□□□ -1.77
SRB5YGR104C AAP1P37898 856 aaKnown RBP4.01□□□□□ -1.77
SRB5YGR104C SHE3P38272 425 aaKnown RBP4.01□□□□□ -1.77
SRB5YGR104C MMS21P38632 267 aa4.01□□□□□ -1.77
SRB5YGR104C YHR033WP38690 423 aa4.01□□□□□ -1.77
SRB5YGR104C TRM5P38793 499 aa4.01□□□□□ -1.77
SRB5YGR104C YJL193WP39542 402 aa4.01□□□□□ -1.77
SRB5YGR104C BDH1P39714 382 aa4.01□□□□□ -1.77
SRB5YGR104C TDA10P42938 290 aa4.01□□□□□ -1.77
SRB5YGR104C YFL015CP43578 164 aa4.01□□□□□ -1.77
SRB5YGR104C YGL235WP53071 178 aa4.01□□□□□ -1.77
SRB5YGR104C YGL036WP53185 909 aaPredicted RBP4.01□□□□□ -1.77
SRB5YGR104C SOL4P53315 255 aa4.01□□□□□ -1.77
SRB5YGR104C EFM6P53970 246 aa4.01□□□□□ -1.77
SRB5YGR104C SHR3Q02774 210 aa4.01□□□□□ -1.77
SRB5YGR104C YPL080CQ02826 108 aa4.01□□□□□ -1.77
SRB5YGR104C PEX10Q05568 337 aa4.01□□□□□ -1.77
SRB5YGR104C RIF2Q06208 395 aa4.01□□□□□ -1.77
SRB5YGR104C IPK1Q06667 281 aa4.01□□□□□ -1.77
SRB5YGR104C YPR091CQ06833 770 aa4.01□□□□□ -1.77
SRB5YGR104C SLF1Q12034 447 aaKnown RBP4.01□□□□□ -1.77
SRB5YGR104C RLM1Q12224 676 aa4.01□□□□□ -1.77
SRB5YGR104C WTM1Q12363 437 aaKnown RBP4.01□□□□□ -1.77
SRB5YGR104C RTR2Q12378 196 aa4.01□□□□□ -1.77
SRB5YGR104C RRD2Q12461 358 aa4.01□□□□□ -1.77
SRB5YGR104C YCL001W-BQ96VH2 84 aa4.01□□□□□ -1.77
SRB5YGR104C RAV1P47104 1357 aa4.01□□□□□ -1.77
SRB5YGR104C AAC1P04710 309 aa4□□□□□ -1.77
SRB5YGR104C SPT3P06844 337 aa4□□□□□ -1.77
SRB5YGR104C ARD1P07347 238 aaPredicted RBP4□□□□□ -1.77
SRB5YGR104C ASP3-2P0CX77 362 aa4□□□□□ -1.77
SRB5YGR104C ASP3-3P0CX78 362 aa4□□□□□ -1.77
SRB5YGR104C ASP3-4P0CX79 362 aa4□□□□□ -1.77
SRB5YGR104C ASP3-1P0CZ17 362 aa4□□□□□ -1.77
SRB5YGR104C POX1P13711 748 aa4□□□□□ -1.77
SRB5YGR104C HXT2P23585 541 aa4□□□□□ -1.77
SRB5YGR104C GPI12P23797 304 aa4□□□□□ -1.77
SRB5YGR104C MSS51P32335 436 aa4□□□□□ -1.77
SRB5YGR104C PDR3P33200 976 aa4□□□□□ -1.77
SRB5YGR104C UPS2P35200 230 aa4□□□□□ -1.77
SRB5YGR104C SPT10P35208 640 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms