RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHC1	YER096W	AI1	P03875	834 aa		7.18	□□□□□ -1.26
SHC1	YER096W	YSF3	P0C074	85 aa	Predicted RBP	7.18	□□□□□ -1.26
SHC1	YER096W	YOL162W	P0CF19	215 aa		7.18	□□□□□ -1.26
SHC1	YER096W	TEC1	P18412	486 aa		7.18	□□□□□ -1.26
SHC1	YER096W	OAC1	P32332	324 aa		7.18	□□□□□ -1.26
SHC1	YER096W	VMA6	P32366	345 aa	Known RBP	7.18	□□□□□ -1.26
SHC1	YER096W	HIR2	P32480	875 aa		7.18	□□□□□ -1.26
SHC1	YER096W	MKK2	P32491	506 aa		7.18	□□□□□ -1.26
SHC1	YER096W	YKL077W	P36081	392 aa		7.18	□□□□□ -1.26
SHC1	YER096W	ECM4	P36156	370 aa		7.18	□□□□□ -1.26
SHC1	YER096W	MCM7	P38132	845 aa		7.18	□□□□□ -1.26
SHC1	YER096W	MID1	P41821	548 aa		7.18	□□□□□ -1.26
SHC1	YER096W	YJR115W	P47152	169 aa		7.18	□□□□□ -1.26
SHC1	YER096W	DBP6	P53734	629 aa	Known RBP	7.18	□□□□□ -1.26
SHC1	YER096W	ASI1	P54074	624 aa		7.18	□□□□□ -1.26
SHC1	YER096W	SNP1	Q00916	300 aa	Predicted RBP	7.18	□□□□□ -1.26
SHC1	YER096W	YSA1	Q01976	231 aa		7.18	□□□□□ -1.26
SHC1	YER096W	YKR011C	Q02209	353 aa		7.18	□□□□□ -1.26
SHC1	YER096W	PRP3	Q03338	469 aa	Predicted RBP	7.18	□□□□□ -1.26
SHC1	YER096W	MRX10	Q05648	414 aa		7.18	□□□□□ -1.26
SHC1	YER096W	SPC3	Q12133	184 aa		7.18	□□□□□ -1.26
SHC1	YER096W	SEN1	Q00416	2231 aa	Known RBP	7.18	□□□□□ -1.26
SHC1	YER096W	MET2	P08465	486 aa		7.17	□□□□□ -1.26
SHC1	YER096W	DAT1	P13483	248 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	RPL5	P26321	297 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	DCG1	P32460	244 aa		7.17	□□□□□ -1.26
SHC1	YER096W	EMP70	P32802	667 aa		7.17	□□□□□ -1.26
SHC1	YER096W	PEX18	P38855	283 aa		7.17	□□□□□ -1.26
SHC1	YER096W	GCN20	P43535	752 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	CHA4	P43634	648 aa		7.17	□□□□□ -1.26
SHC1	YER096W	YJR141W	P47172	347 aa	Predicted RBP	7.17	□□□□□ -1.26
SHC1	YER096W	SPT20	P50875	604 aa		7.17	□□□□□ -1.26
SHC1	YER096W	EXG2	P52911	562 aa		7.17	□□□□□ -1.26
SHC1	YER096W	COS1	P53822	381 aa		7.17	□□□□□ -1.26
SHC1	YER096W	YMR210W	Q03649	449 aa		7.17	□□□□□ -1.26
SHC1	YER096W	TPO4	Q12256	659 aa		7.17	□□□□□ -1.26
SHC1	YER096W	PSF1	Q12488	208 aa		7.17	□□□□□ -1.26
SHC1	YER096W	ERD1	P16151	362 aa		7.17	□□□□□ -1.26
SHC1	YER096W	SNF6	P18888	332 aa		7.17	□□□□□ -1.26
SHC1	YER096W	CMK1	P27466	446 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	SBA1	P28707	216 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	NDC1	P32500	655 aa		7.17	□□□□□ -1.26
SHC1	YER096W	ORC2	P32833	620 aa		7.17	□□□□□ -1.26
SHC1	YER096W	YPT7	P32939	208 aa		7.17	□□□□□ -1.26
SHC1	YER096W	SNU114	P36048	1008 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	BAP2	P38084	609 aa		7.17	□□□□□ -1.26
SHC1	YER096W	YLF2	P38746	405 aa		7.17	□□□□□ -1.26
SHC1	YER096W	UME6	P39001	836 aa		7.17	□□□□□ -1.26
SHC1	YER096W	VPS52	P39904	641 aa		7.17	□□□□□ -1.26
SHC1	YER096W	GDI1	P39958	451 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	RET2	P43621	546 aa		7.17	□□□□□ -1.26
SHC1	YER096W	EFM3	P47163	339 aa		7.17	□□□□□ -1.26
SHC1	YER096W	SHE4	P51534	789 aa		7.17	□□□□□ -1.26
SHC1	YER096W	VPS73	P53142	486 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	LCL3	P53153	274 aa		7.17	□□□□□ -1.26
SHC1	YER096W	RBG2	P53295	368 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	NCE101	Q02820	53 aa		7.17	□□□□□ -1.26
SHC1	YER096W	SEI1	Q06058	285 aa		7.17	□□□□□ -1.26
SHC1	YER096W	YLR446W	Q06204	433 aa		7.17	□□□□□ -1.26
SHC1	YER096W	MCM21	Q06675	368 aa		7.17	□□□□□ -1.26
SHC1	YER096W	FMP45	Q07651	309 aa		7.17	□□□□□ -1.26
SHC1	YER096W	BRX1	Q08235	291 aa	Known RBP	7.17	□□□□□ -1.26
SHC1	YER096W	PRP46	Q12417	451 aa	Predicted RBP	7.17	□□□□□ -1.26
SHC1	YER096W	DFG16	Q99234	619 aa		7.17	□□□□□ -1.26
SHC1	YER096W	GLT1	Q12680	2145 aa	Known RBP	7.16	□□□□□ -1.26
SHC1	YER096W	ADE5,7	P07244	802 aa	Known RBP	7.16	□□□□□ -1.26
SHC1	YER096W	GLK1	P17709	500 aa	Known RBP	7.16	□□□□□ -1.26
SHC1	YER096W	ERD2	P18414	219 aa		7.16	□□□□□ -1.26
SHC1	YER096W	KGD1	P20967	1014 aa	Known RBP	7.16	□□□□□ -1.26
SHC1	YER096W	DPB2	P24482	689 aa	Predicted RBP	7.16	□□□□□ -1.26
SHC1	YER096W	ASF2	P32448	525 aa	Predicted RBP	7.16	□□□□□ -1.26
SHC1	YER096W	ECM15	P35195	104 aa		7.16	□□□□□ -1.26
SHC1	YER096W	DHR2	P36009	735 aa	Predicted RBP	7.16	□□□□□ -1.26
SHC1	YER096W	YBR139W	P38109	508 aa		7.16	□□□□□ -1.26
SHC1	YER096W	RRP4	P38792	359 aa	Known RBP	7.16	□□□□□ -1.26
SHC1	YER096W	NUP49	Q02199	472 aa		7.16	□□□□□ -1.26
SHC1	YER096W	OST6	Q03723	332 aa		7.16	□□□□□ -1.26
SHC1	YER096W	RNH1	Q04740	348 aa		7.16	□□□□□ -1.26
SHC1	YER096W	FMP42	Q04991	504 aa		7.16	□□□□□ -1.26
SHC1	YER096W	HER1	Q12276	1246 aa		7.16	□□□□□ -1.26
SHC1	YER096W	IES3	Q12345	250 aa		7.16	□□□□□ -1.26
SHC1	YER096W	DET1	Q99288	334 aa	Known RBP	7.16	□□□□□ -1.26
SHC1	YER096W	COX1	P00401	534 aa		7.15	□□□□□ -1.27
SHC1	YER096W	IDP1	P21954	428 aa	Known RBP	7.15	□□□□□ -1.27
SHC1	YER096W	RPS5	P26783	225 aa	Known RBP	7.15	□□□□□ -1.27
SHC1	YER096W	PMT2	P31382	759 aa		7.15	□□□□□ -1.27
SHC1	YER096W	MRPL16	P38064	232 aa		7.15	□□□□□ -1.27
SHC1	YER096W	ARN2	P38724	620 aa		7.15	□□□□□ -1.27
SHC1	YER096W	YFR054C	P43622	192 aa		7.15	□□□□□ -1.27
SHC1	YER096W	SEH1	P53011	349 aa	Known RBP	7.15	□□□□□ -1.27
SHC1	YER096W	SNZ1	Q03148	297 aa		7.15	□□□□□ -1.27
SHC1	YER096W	TPP1	Q03796	238 aa		7.15	□□□□□ -1.27
SHC1	YER096W	PLM2	Q04383	521 aa		7.15	□□□□□ -1.27
SHC1	YER096W	ERB1	Q04660	807 aa	Known RBP	7.15	□□□□□ -1.27
SHC1	YER096W	UIP4	Q08926	304 aa		7.15	□□□□□ -1.27
SHC1	YER096W	FMP40	Q08968	688 aa	Predicted RBP	7.15	□□□□□ -1.27
SHC1	YER096W	YOR214C	Q12282	236 aa		7.15	□□□□□ -1.27
SHC1	YER096W	RPL40A	P0CH08	128 aa	Known RBP	7.14	□□□□□ -1.27
SHC1	YER096W	RPL40B	P0CH09	128 aa	Known RBP	7.14	□□□□□ -1.27
SHC1	YER096W	PUP1	P25043	261 aa		7.14	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms