RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	POL30	P15873	258 aa	Known RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	AIM17	P23180	465 aa	Known RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	YSR3	P23501	404 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	ERG9	P29704	444 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	ITR2	P30606	609 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	TMT1	P32643	299 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	PRS1	P32895	427 aa	Known RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	CYM1	P32898	989 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	IMP3	P32899	183 aa	Predicted RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	GPX2	P38143	162 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	SBE22	P38814	852 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	ALD5	P40047	520 aa	Known RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	SHQ1	P40486	507 aa	Predicted RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	RRT5	P43607	289 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	YAR1	P46683	200 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	OKP1	P53298	406 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	MKC7	P53379	596 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	BIO4	P53630	237 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	RPL15B	P54780	204 aa	Predicted RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	STP1	Q00947	519 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	COX20	Q04935	205 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	CTS2	Q06350	511 aa		4.12	□□□□□ -1.75
GGA1	YDR358W	BER1	Q06688	274 aa	Known RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	TSR1	Q07381	788 aa	Known RBP	4.12	□□□□□ -1.75
GGA1	YDR358W	RAD3	P06839	778 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	YER190C-B	P0CX94	160 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	YEL077W-A	P0CX95	160 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	YGR296C-B	P0CX96	160 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	YPL283W-B	P0CX97	160 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	YPR204C-A	P0CX98	160 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	SAM2	P19358	384 aa	Known RBP	4.11	□□□□□ -1.75
GGA1	YDR358W	SLY1	P22213	666 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	RVS161	P25343	265 aa	Known RBP	4.11	□□□□□ -1.75
GGA1	YDR358W	YCR016W	P25617	290 aa	Known RBP	4.11	□□□□□ -1.75
GGA1	YDR358W	MKK1	P32490	508 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	GCG1	P32656	232 aa	Known RBP	4.11	□□□□□ -1.75
GGA1	YDR358W	PEX2	P32800	271 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	TIR2	P33890	251 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	COS9	P36034	407 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	CHK1	P38147	527 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	YHK8	P38776	514 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	PRM9	P39551	298 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	DIM1	P41819	318 aa	Known RBP	4.11	□□□□□ -1.75
GGA1	YDR358W	YJL118W	P47022	219 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	AIM24	P47127	394 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	SEH1	P53011	349 aa	Known RBP	4.11	□□□□□ -1.75
GGA1	YDR358W	BSC6	Q08280	497 aa		4.11	□□□□□ -1.75
GGA1	YDR358W	MEX67	Q99257	599 aa	Known RBP	4.11	□□□□□ -1.75
GGA1	YDR358W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
GGA1	YDR358W	COX2	P00410	251 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	MER1	P16523	270 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	MRPL25	P23369	157 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	CWP1	P28319	239 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	PRR1	P28708	518 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	SRB4	P32569	687 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	MUD1	P32605	298 aa	Known RBP	4.1	□□□□□ -1.75
GGA1	YDR358W	PTR2	P32901	601 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	YKL071W	P36086	256 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	PIR3	Q03180	325 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	ALE1	Q08548	619 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	YLR108C	Q12259	485 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	MDM10	P18409	493 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	GLN3	P18494	730 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	PUT3	P25502	979 aa	Predicted RBP	4.1	□□□□□ -1.75
GGA1	YDR358W	POP5	P28005	173 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	CUE2	P36075	443 aa	Known RBP	4.1	□□□□□ -1.75
GGA1	YDR358W	SWD2	P36104	329 aa	Predicted RBP	4.1	□□□□□ -1.75
GGA1	YDR358W	RIB5	P38145	238 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	TDA11	P38854	504 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	ALG8	P40351	577 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	AGP3	P43548	558 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	OTU1	P43558	301 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	IKS1	P47042	667 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	ABM1	P47146	123 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	TRF5	P48561	642 aa	Known RBP	4.1	□□□□□ -1.75
GGA1	YDR358W	CAF40	P53829	373 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	CSM3	Q04659	317 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	PBP4	Q07362	185 aa	Known RBP	4.1	□□□□□ -1.75
GGA1	YDR358W	YPQ1	Q12010	308 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	RGT2	Q12300	763 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	ERP3	Q12403	225 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	ATG31	Q12421	196 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	CSR2	Q12734	1121 aa		4.1	□□□□□ -1.75
GGA1	YDR358W	DET1	Q99288	334 aa	Known RBP	4.1	□□□□□ -1.75
GGA1	YDR358W	DAL82	P21705	255 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	ZIP1	P31111	875 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	KRE6	P32486	720 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	RPM2	Q02773	1202 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	IRC4	Q03036	179 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	GTO3	Q04806	366 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	YLR283W	Q05867	314 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	GAT3	Q07928	141 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	SNX3	Q08826	162 aa	Known RBP	4.09	□□□□□ -1.76
GGA1	YDR358W	SET6	Q12529	373 aa		4.09	□□□□□ -1.76
GGA1	YDR358W	CFT1	Q06632	1357 aa	Known RBP	4.09	□□□□□ -1.76
GGA1	YDR358W	PRB1	P09232	635 aa		4.08	□□□□□ -1.76
GGA1	YDR358W	MTF1	P14908	341 aa	Known RBP	4.08	□□□□□ -1.76
GGA1	YDR358W	VPS1	P21576	704 aa	Known RBP	4.08	□□□□□ -1.76
GGA1	YDR358W	YCR022C	P25620	114 aa		4.08	□□□□□ -1.76
GGA1	YDR358W	TRS65	P32893	560 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms