RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W AIM20P40451 204 aa1.55□□□□□ -2.16
CTF4YPR135W CIN1P40987 1014 aa1.55□□□□□ -2.16
CTF4YPR135W CTK3P46963 296 aaPredicted RBP1.55□□□□□ -2.16
CTF4YPR135W GLG2P47011 380 aa1.55□□□□□ -2.16
CTF4YPR135W RPC17P47076 161 aa1.55□□□□□ -2.16
CTF4YPR135W YIP5P53108 310 aa1.55□□□□□ -2.16
CTF4YPR135W ARP5P53946 755 aa1.55□□□□□ -2.16
CTF4YPR135W SKO1Q02100 647 aa1.55□□□□□ -2.16
CTF4YPR135W RSC9Q03124 581 aa1.55□□□□□ -2.16
CTF4YPR135W NDL1Q06568 189 aa1.55□□□□□ -2.16
CTF4YPR135W VPS68Q12016 184 aa1.55□□□□□ -2.16
CTF4YPR135W YOR342CQ12182 319 aa1.55□□□□□ -2.16
CTF4YPR135W INP53Q12271 1107 aa1.55□□□□□ -2.16
CTF4YPR135W RRP12Q12754 1228 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W YPT1P01123 206 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W ARG81P05085 880 aa1.54□□□□□ -2.16
CTF4YPR135W BCY1P07278 416 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W CHO1P08456 276 aa1.54□□□□□ -2.16
CTF4YPR135W RPL31BP0C2H9 113 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W MRP2P10663 115 aaPredicted RBP1.54□□□□□ -2.16
CTF4YPR135W CLC1P17891 233 aa1.54□□□□□ -2.16
CTF4YPR135W SGV1P23293 657 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W YCR102CP25608 368 aa1.54□□□□□ -2.16
CTF4YPR135W RDS1P25611 832 aa1.54□□□□□ -2.16
CTF4YPR135W LAC1P28496 418 aa1.54□□□□□ -2.16
CTF4YPR135W HIR2P32480 875 aa1.54□□□□□ -2.16
CTF4YPR135W MUD1P32605 298 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W ASK1P35734 292 aa1.54□□□□□ -2.16
CTF4YPR135W YKT6P36015 200 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W YKL070WP36087 169 aa1.54□□□□□ -2.16
CTF4YPR135W MRPL37P36532 105 aa1.54□□□□□ -2.16
CTF4YPR135W YHR177WP38867 453 aa1.54□□□□□ -2.16
CTF4YPR135W YHR210CP38893 341 aa1.54□□□□□ -2.16
CTF4YPR135W YFR018CP43599 363 aa1.54□□□□□ -2.16
CTF4YPR135W NMD5P46970 1048 aa1.54□□□□□ -2.16
CTF4YPR135W PMT4P46971 762 aa1.54□□□□□ -2.16
CTF4YPR135W DPB11P47027 764 aaPredicted RBP1.54□□□□□ -2.16
CTF4YPR135W DIA3P52290 468 aa1.54□□□□□ -2.16
CTF4YPR135W RMD9P53140 646 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W YET2Q04210 160 aa1.54□□□□□ -2.16
CTF4YPR135W SPG3Q04398 127 aaPredicted RBP1.54□□□□□ -2.16
CTF4YPR135W CYK3Q07533 885 aa1.54□□□□□ -2.16
CTF4YPR135W YFH1Q07540 174 aa1.54□□□□□ -2.16
CTF4YPR135W LDB17Q12342 491 aa1.54□□□□□ -2.16
CTF4YPR135W CAR1P00812 333 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W ILV5P06168 395 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W LEU4P06208 619 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W CNA1P23287 553 aa1.54□□□□□ -2.16
CTF4YPR135W MGR1P25573 417 aa1.54□□□□□ -2.16
CTF4YPR135W HMX1P32339 317 aa1.54□□□□□ -2.16
CTF4YPR135W MSN4P33749 630 aa1.54□□□□□ -2.16
CTF4YPR135W MRPL15P36523 253 aa1.54□□□□□ -2.16
CTF4YPR135W OPY1P38271 328 aa1.54□□□□□ -2.16
CTF4YPR135W UIP3P39547 235 aa1.54□□□□□ -2.16
CTF4YPR135W YER034WP40022 185 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W INA22P40576 216 aa1.54□□□□□ -2.16
CTF4YPR135W RIB4P50861 169 aaPredicted RBP1.54□□□□□ -2.16
CTF4YPR135W YGL108CP53139 140 aa1.54□□□□□ -2.16
CTF4YPR135W TIM21P53220 239 aa1.54□□□□□ -2.16
CTF4YPR135W COP1P53622 1201 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W MNT4P53745 580 aa1.54□□□□□ -2.16
CTF4YPR135W IST1P53843 298 aaPredicted RBP1.54□□□□□ -2.16
CTF4YPR135W ELP3Q02908 557 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W PLM2Q04383 521 aa1.54□□□□□ -2.16
CTF4YPR135W YDR109CQ04585 715 aa1.54□□□□□ -2.16
CTF4YPR135W RRP45Q05636 305 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W ADE13Q05911 482 aaKnown RBP1.54□□□□□ -2.16
CTF4YPR135W DCS1Q06151 350 aa1.54□□□□□ -2.16
CTF4YPR135W AEP3Q12089 606 aa1.54□□□□□ -2.16
CTF4YPR135W VAM3Q12241 283 aa1.54□□□□□ -2.16
CTF4YPR135W ADF1Q2V2Q1 113 aa1.54□□□□□ -2.16
CTF4YPR135W HXK2P04807 486 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W GCD2P12754 651 aaPredicted RBP1.53□□□□□ -2.16
CTF4YPR135W VPS1P21576 704 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W YCL068CP25593 260 aa1.53□□□□□ -2.16
CTF4YPR135W NDI1P32340 513 aa1.53□□□□□ -2.16
CTF4YPR135W EFB1P32471 206 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W DOA4P32571 926 aa1.53□□□□□ -2.16
CTF4YPR135W NRP1P32770 719 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
CTF4YPR135W ATP3P38077 311 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W TSC10P38342 320 aa1.53□□□□□ -2.16
CTF4YPR135W VBA2P38358 474 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W STP2P38704 541 aa1.53□□□□□ -2.16
CTF4YPR135W ANS1P38832 159 aa1.53□□□□□ -2.16
CTF4YPR135W SPC97P38863 823 aa1.53□□□□□ -2.16
CTF4YPR135W YER130CP39959 443 aa1.53□□□□□ -2.16
CTF4YPR135W TRF5P48561 642 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W ROG1P53118 685 aa1.53□□□□□ -2.16
CTF4YPR135W DBP6P53734 629 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W RHO3Q00245 231 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W YMR178WQ03219 274 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W EKI1Q03764 534 aa1.53□□□□□ -2.16
CTF4YPR135W YMR130WQ04223 302 aa1.53□□□□□ -2.16
CTF4YPR135W YLR297WQ05899 129 aa1.53□□□□□ -2.16
CTF4YPR135W YLL007CQ07799 665 aa1.53□□□□□ -2.16
CTF4YPR135W TEN1Q07921 160 aa1.53□□□□□ -2.16
CTF4YPR135W PLB3Q08108 686 aa1.53□□□□□ -2.16
CTF4YPR135W DIS3Q08162 1001 aaKnown RBP1.53□□□□□ -2.16
CTF4YPR135W RKM1Q08961 583 aaPredicted RBP1.53□□□□□ -2.16
CTF4YPR135W TIP41Q12199 356 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms