RNA–Protein interactions for RNA: YNL245C

CWC25, Transcript of Splicing factor required for the first step of pre-mRNA splicing, yeast

Gene CWC25, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWC25	YNL245C	RRP1	P35178	278 aa	Predicted RBP	4.95	□□□□□ -1.62
CWC25	YNL245C	DAD2	P36162	133 aa		4.95	□□□□□ -1.62
CWC25	YNL245C	AVT5	P38176	459 aa		4.95	□□□□□ -1.62
CWC25	YNL245C	KAP104	P38217	918 aa	Known RBP	4.95	□□□□□ -1.62
CWC25	YNL245C	PTH1	P38876	190 aa	Known RBP	4.95	□□□□□ -1.62
CWC25	YNL245C	SHC1	P39000	512 aa		4.95	□□□□□ -1.62
CWC25	YNL245C	PMT5	P52867	743 aa		4.95	□□□□□ -1.62
CWC25	YNL245C	RRP46	P53256	223 aa	Predicted RBP	4.95	□□□□□ -1.62
CWC25	YNL245C	DIB1	Q06819	143 aa	Predicted RBP	4.95	□□□□□ -1.62
CWC25	YNL245C	SMF3	Q12078	473 aa	Predicted RBP	4.95	□□□□□ -1.62
CWC25	YNL245C	RPL12A	P0CX53	165 aa	Known RBP	4.94	□□□□□ -1.62
CWC25	YNL245C	RPL12B	P0CX54	165 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	DAP2	P18962	818 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	EXG1	P23776	448 aa	Known RBP	4.94	□□□□□ -1.62
CWC25	YNL245C	NAM9	P27929	486 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	COX13	P32799	129 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
CWC25	YNL245C	LAS1	P36146	502 aa	Predicted RBP	4.94	□□□□□ -1.62
CWC25	YNL245C	MTM1	P53320	366 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	URC2	Q04411	772 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	IPK1	Q06667	281 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	TLG2	Q08144	397 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	CEX1	Q12453	761 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	SRN2	Q99176	213 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	POM152	P39685	1337 aa		4.94	□□□□□ -1.62
CWC25	YNL245C	PMD1	P32634	1753 aa		4.93	□□□□□ -1.62
CWC25	YNL245C	ADH5	P38113	351 aa	Known RBP	4.93	□□□□□ -1.62
CWC25	YNL245C	SPP381	P38282	291 aa	Predicted RBP	4.93	□□□□□ -1.62
CWC25	YNL245C	GDT1	P38301	280 aa	Predicted RBP	4.93	□□□□□ -1.62
CWC25	YNL245C	STE24	P47154	453 aa		4.93	□□□□□ -1.62
CWC25	YNL245C	RTT102	P53330	157 aa		4.93	□□□□□ -1.62
CWC25	YNL245C	CWC25	P53854	179 aa	Known RBP	4.93	□□□□□ -1.62
CWC25	YNL245C	YFH1	Q07540	174 aa		4.93	□□□□□ -1.62
CWC25	YNL245C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.93	□□□□□ -1.62
CWC25	YNL245C	SSK22	P25390	1331 aa	Predicted RBP	4.93	□□□□□ -1.62
CWC25	YNL245C	CAP2	P13517	287 aa		4.92	□□□□□ -1.62
CWC25	YNL245C	ICL1	P28240	557 aa	Predicted RBP	4.92	□□□□□ -1.62
CWC25	YNL245C	MNS1	P32906	549 aa		4.92	□□□□□ -1.62
CWC25	YNL245C	ATM1	P40416	690 aa		4.92	□□□□□ -1.62
CWC25	YNL245C	YPI1	P43587	155 aa		4.92	□□□□□ -1.62
CWC25	YNL245C	TOS2	P50078	622 aa		4.92	□□□□□ -1.62
CWC25	YNL245C	YNL050C	P53952	270 aa		4.92	□□□□□ -1.62
CWC25	YNL245C	PRP3	Q03338	469 aa	Predicted RBP	4.92	□□□□□ -1.62
CWC25	YNL245C	CUE5	Q08412	411 aa	Known RBP	4.92	□□□□□ -1.62
CWC25	YNL245C	RPS8A	P0CX39	200 aa	Known RBP	4.91	□□□□□ -1.62
CWC25	YNL245C	RPS8B	P0CX40	200 aa	Known RBP	4.91	□□□□□ -1.62
CWC25	YNL245C	PHO84	P25297	587 aa	Known RBP	4.91	□□□□□ -1.62
CWC25	YNL245C	DOA1	P36037	715 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	SBE22	P38814	852 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	YGR016W	P53209	190 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	YGR117C	P53270	476 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	SPR6	Q01684	191 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	NUP116	Q02630	1113 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	MRPL35	Q06678	367 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	ASA1	Q06822	443 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	NDE2	Q07500	545 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	TMS1	Q12116	473 aa		4.91	□□□□□ -1.62
CWC25	YNL245C	TPK3	P05986	398 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	ARF1	P11076	181 aa	Known RBP	4.9	□□□□□ -1.63
CWC25	YNL245C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
CWC25	YNL245C	ARO2	P28777	376 aa	Known RBP	4.9	□□□□□ -1.63
CWC25	YNL245C	PHA2	P32452	334 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	KAR9	P32526	644 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	MSG5	P38590	489 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	YHR177W	P38867	453 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	COX14	P39103	70 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	YIL029C	P40538	142 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	REE1	P40893	198 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	AAD15	Q08361	143 aa		4.9	□□□□□ -1.63
CWC25	YNL245C	DAL2	P25335	343 aa		4.89	□□□□□ -1.63
CWC25	YNL245C	YEF1	P32622	495 aa		4.89	□□□□□ -1.63
CWC25	YNL245C	SKT5	P34226	696 aa		4.89	□□□□□ -1.63
CWC25	YNL245C	CAJ1	P39101	391 aa		4.89	□□□□□ -1.63
CWC25	YNL245C	SPG5	P42933	373 aa		4.89	□□□□□ -1.63
CWC25	YNL245C	HRI1	Q05905	244 aa	Known RBP	4.89	□□□□□ -1.63
CWC25	YNL245C	SSC1	P0CS90	654 aa	Known RBP	4.88	□□□□□ -1.63
CWC25	YNL245C	SCH9	P11792	824 aa	Known RBP	4.88	□□□□□ -1.63
CWC25	YNL245C	PET123	P17558	318 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	POP5	P28005	173 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	FAA1	P30624	700 aa	Known RBP	4.88	□□□□□ -1.63
CWC25	YNL245C	SIF2	P38262	535 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	PAN6	P40459	309 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	MRM2	P53123	320 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	SCW10	Q04951	389 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	YDR286C	Q05530	114 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	MDM36	Q06820	579 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	NOP6	Q07623	225 aa	Known RBP	4.88	□□□□□ -1.63
CWC25	YNL245C	YOP1	Q12402	180 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	HKR1	P41809	1802 aa		4.88	□□□□□ -1.63
CWC25	YNL245C	VPS13	Q07878	3144 aa		4.87	□□□□□ -1.63
CWC25	YNL245C	UBA1	P22515	1024 aa	Known RBP	4.87	□□□□□ -1.63
CWC25	YNL245C	YGR210C	P42942	411 aa		4.87	□□□□□ -1.63
CWC25	YNL245C	MDE1	P47095	244 aa		4.87	□□□□□ -1.63
CWC25	YNL245C	COS1	P53822	381 aa		4.87	□□□□□ -1.63
CWC25	YNL245C	LDS2	Q08218	356 aa		4.87	□□□□□ -1.63
CWC25	YNL245C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
CWC25	YNL245C	DPH5	P32469	300 aa	Predicted RBP	4.86	□□□□□ -1.63
CWC25	YNL245C	YIL089W	P40500	205 aa		4.86	□□□□□ -1.63
CWC25	YNL245C	RRN9	P53437	365 aa		4.86	□□□□□ -1.63
CWC25	YNL245C	MTQ1	P53944	314 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 30 ms