RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W SAD1P43589 448 aa4.5□□□□□ -1.69
ROT1YMR200W YPR003CP53394 754 aa4.5□□□□□ -1.69
ROT1YMR200W MPS1P54199 764 aa4.5□□□□□ -1.69
ROT1YMR200W YMR209CQ03648 457 aa4.5□□□□□ -1.69
ROT1YMR200W SNU56Q03782 492 aaKnown RBP4.5□□□□□ -1.69
ROT1YMR200W GGA1Q06336 557 aa4.5□□□□□ -1.69
ROT1YMR200W YOR365CQ08844 703 aa4.5□□□□□ -1.69
ROT1YMR200W SAM4Q08985 325 aaKnown RBP4.5□□□□□ -1.69
ROT1YMR200W SRO7Q12038 1033 aa4.5□□□□□ -1.69
ROT1YMR200W SIA1Q12212 622 aa4.5□□□□□ -1.69
ROT1YMR200W MES1P00958 751 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W RAD52P06778 471 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W RPL27AP0C2H6 136 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W RPL27BP0C2H7 136 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W IMA3P0CW40 589 aa4.49□□□□□ -1.69
ROT1YMR200W IMA4P0CW41 589 aa4.49□□□□□ -1.69
ROT1YMR200W CBF1P17106 351 aa4.49□□□□□ -1.69
ROT1YMR200W VPS1P21576 704 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W DAL82P21705 255 aa4.49□□□□□ -1.69
ROT1YMR200W PUT3P25502 979 aaPredicted RBP4.49□□□□□ -1.69
ROT1YMR200W PRP18P33411 251 aaPredicted RBP4.49□□□□□ -1.69
ROT1YMR200W MIA40P36046 403 aa4.49□□□□□ -1.69
ROT1YMR200W PRS4P38063 326 aaPredicted RBP4.49□□□□□ -1.69
ROT1YMR200W LCP5P40079 357 aaPredicted RBP4.49□□□□□ -1.69
ROT1YMR200W LYS12P40495 371 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W UBP8P50102 471 aa4.49□□□□□ -1.69
ROT1YMR200W PYK2P52489 506 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W BUD32P53323 261 aa4.49□□□□□ -1.69
ROT1YMR200W SMM1P53720 384 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W ADH6Q04894 360 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W RTT103Q05543 409 aa4.49□□□□□ -1.69
ROT1YMR200W SNT309Q06091 175 aaPredicted RBP4.49□□□□□ -1.69
ROT1YMR200W ATG26Q06321 1198 aa4.49□□□□□ -1.69
ROT1YMR200W SDO1Q07953 250 aaKnown RBP4.49□□□□□ -1.69
ROT1YMR200W IMA2Q08295 589 aa4.49□□□□□ -1.69
ROT1YMR200W RRI1Q12468 440 aa4.49□□□□□ -1.69
ROT1YMR200W SEY1Q99287 776 aa4.49□□□□□ -1.69
ROT1YMR200W GAL4P04386 881 aa4.48□□□□□ -1.69
ROT1YMR200W HEM1P09950 548 aaPredicted RBP4.48□□□□□ -1.69
ROT1YMR200W SNF3P10870 884 aa4.48□□□□□ -1.69
ROT1YMR200W YAK1P14680 807 aa4.48□□□□□ -1.69
ROT1YMR200W STE18P18852 110 aa4.48□□□□□ -1.69
ROT1YMR200W MXR2P25566 168 aa4.48□□□□□ -1.69
ROT1YMR200W POP5P28005 173 aa4.48□□□□□ -1.69
ROT1YMR200W ATP7P30902 174 aa4.48□□□□□ -1.69
ROT1YMR200W RAD24P32641 659 aa4.48□□□□□ -1.69
ROT1YMR200W MYO3P36006 1272 aa4.48□□□□□ -1.69
ROT1YMR200W CBT1P36038 271 aaPredicted RBP4.48□□□□□ -1.69
ROT1YMR200W RIB1P38066 345 aa4.48□□□□□ -1.69
ROT1YMR200W ROT2P38138 954 aa4.48□□□□□ -1.69
ROT1YMR200W DSN1P40568 576 aa4.48□□□□□ -1.69
ROT1YMR200W YFL015CP43578 164 aa4.48□□□□□ -1.69
ROT1YMR200W TRS85P46944 698 aa4.48□□□□□ -1.69
ROT1YMR200W ATP23P53722 227 aa4.48□□□□□ -1.69
ROT1YMR200W YNL181WP53878 407 aa4.48□□□□□ -1.69
ROT1YMR200W STP1Q00947 519 aa4.48□□□□□ -1.69
ROT1YMR200W YDR387CQ04162 555 aa4.48□□□□□ -1.69
ROT1YMR200W UBX2Q04228 584 aa4.48□□□□□ -1.69
ROT1YMR200W CDD1Q06549 142 aa4.48□□□□□ -1.69
ROT1YMR200W THI3Q07471 609 aa4.48□□□□□ -1.69
ROT1YMR200W LDS2Q08218 356 aa4.48□□□□□ -1.69
ROT1YMR200W BRX1Q08235 291 aaKnown RBP4.48□□□□□ -1.69
ROT1YMR200W MSH5Q12175 901 aa4.48□□□□□ -1.69
ROT1YMR200W YLL056CQ12177 298 aa4.48□□□□□ -1.69
ROT1YMR200W TIP41Q12199 356 aa4.48□□□□□ -1.69
ROT1YMR200W YER145C-AA0A023PYF4 145 aa4.47□□□□□ -1.69
ROT1YMR200W THP2O13539 261 aaKnown RBP4.47□□□□□ -1.69
ROT1YMR200W MRP1P10662 321 aaKnown RBP4.47□□□□□ -1.69
ROT1YMR200W ERG9P29704 444 aa4.47□□□□□ -1.69
ROT1YMR200W VMA5P31412 392 aaKnown RBP4.47□□□□□ -1.69
ROT1YMR200W APE2P32454 952 aaKnown RBP4.47□□□□□ -1.69
ROT1YMR200W SKN1P33336 771 aa4.47□□□□□ -1.69
ROT1YMR200W SKT5P34226 696 aa4.47□□□□□ -1.69
ROT1YMR200W MAK5P38112 773 aaPredicted RBP4.47□□□□□ -1.69
ROT1YMR200W MIC12P38341 106 aa4.47□□□□□ -1.69
ROT1YMR200W ARP1P38696 384 aa4.47□□□□□ -1.69
ROT1YMR200W SEC72P39742 193 aaKnown RBP4.47□□□□□ -1.69
ROT1YMR200W MMF1P40185 145 aaKnown RBP4.47□□□□□ -1.69
ROT1YMR200W COX16P47081 118 aa4.47□□□□□ -1.69
ROT1YMR200W SSN8P47821 323 aa4.47□□□□□ -1.69
ROT1YMR200W YPT11P48559 417 aa4.47□□□□□ -1.69
ROT1YMR200W YGR067CP53243 804 aa4.47□□□□□ -1.69
ROT1YMR200W DIA1P54005 336 aa4.47□□□□□ -1.69
ROT1YMR200W RVB1Q03940 463 aaKnown RBP4.47□□□□□ -1.69
ROT1YMR200W ASA1Q06822 443 aa4.47□□□□□ -1.69
ROT1YMR200W YPQ1Q12010 308 aa4.47□□□□□ -1.69
ROT1YMR200W AI5_BETAQ9ZZX0 354 aa4.47□□□□□ -1.69
ROT1YMR200W ATP1P07251 545 aaKnown RBP4.46□□□□□ -1.7
ROT1YMR200W ARF1P11076 181 aaKnown RBP4.46□□□□□ -1.7
ROT1YMR200W MAS2P11914 482 aa4.46□□□□□ -1.7
ROT1YMR200W TCP1P12612 559 aaKnown RBP4.46□□□□□ -1.7
ROT1YMR200W CLB2P24869 491 aa4.46□□□□□ -1.7
ROT1YMR200W VMA6P32366 345 aaKnown RBP4.46□□□□□ -1.7
ROT1YMR200W VPS51P36116 164 aa4.46□□□□□ -1.7
ROT1YMR200W SUR2P38992 349 aa4.46□□□□□ -1.7
ROT1YMR200W PCL6P40038 420 aa4.46□□□□□ -1.7
ROT1YMR200W COA1P40452 197 aa4.46□□□□□ -1.7
ROT1YMR200W YJL043WP47053 257 aa4.46□□□□□ -1.7
ROT1YMR200W AIM24P47127 394 aa4.46□□□□□ -1.7
ROT1YMR200W LYS20P48570 428 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms