RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W ARV1Q06541 321 aa9.23□□□□□ -0.93
SHH4YLR164W YPR172WQ06608 200 aa9.23□□□□□ -0.93
SHH4YLR164W SKI7Q08491 747 aaPredicted RBP9.23□□□□□ -0.93
SHH4YLR164W MHF1Q3E835 90 aa9.23□□□□□ -0.93
SHH4YLR164W LYP1P32487 611 aa9.22□□□□□ -0.93
SHH4YLR164W LHS1P36016 881 aa9.22□□□□□ -0.93
SHH4YLR164W VPS51P36116 164 aa9.22□□□□□ -0.93
SHH4YLR164W YBR138CP38277 524 aa9.22□□□□□ -0.93
SHH4YLR164W CTF8P38877 133 aa9.22□□□□□ -0.93
SHH4YLR164W SOP4P39543 234 aaPredicted RBP9.22□□□□□ -0.93
SHH4YLR164W YEL068CP39977 110 aa9.22□□□□□ -0.93
SHH4YLR164W SOK1P40317 901 aa9.22□□□□□ -0.93
SHH4YLR164W SMK1P41808 388 aa9.22□□□□□ -0.93
SHH4YLR164W SNO3P43544 222 aa9.22□□□□□ -0.93
SHH4YLR164W SNP1Q00916 300 aaPredicted RBP9.22□□□□□ -0.93
SHH4YLR164W YDR179W-AQ03983 463 aa9.22□□□□□ -0.93
SHH4YLR164W YLR345WQ06137 509 aa9.22□□□□□ -0.93
SHH4YLR164W YEH1Q07804 573 aa9.22□□□□□ -0.93
SHH4YLR164W CRT10Q08226 957 aa9.22□□□□□ -0.93
SHH4YLR164W CSF1Q12150 2958 aa9.22□□□□□ -0.93
SHH4YLR164W SEN1Q00416 2231 aaKnown RBP9.21□□□□□ -0.93
SHH4YLR164W YOL163WP0CF20 169 aa9.21□□□□□ -0.94
SHH4YLR164W CNA1P23287 553 aa9.21□□□□□ -0.94
SHH4YLR164W RRP7P25368 297 aaPredicted RBP9.21□□□□□ -0.94
SHH4YLR164W DCG1P32460 244 aa9.21□□□□□ -0.94
SHH4YLR164W MKK2P32491 506 aa9.21□□□□□ -0.94
SHH4YLR164W SSE2P32590 693 aaKnown RBP9.21□□□□□ -0.94
SHH4YLR164W HBS1P32769 611 aaKnown RBP9.21□□□□□ -0.94
SHH4YLR164W YOR062CP36025 268 aa9.21□□□□□ -0.94
SHH4YLR164W SIC1P38634 284 aa9.21□□□□□ -0.94
SHH4YLR164W AST2P39945 430 aaKnown RBP9.21□□□□□ -0.94
SHH4YLR164W YNL208WP40159 199 aaKnown RBP9.21□□□□□ -0.94
SHH4YLR164W YJR115WP47152 169 aa9.21□□□□□ -0.94
SHH4YLR164W RNH70P53331 553 aa9.21□□□□□ -0.94
SHH4YLR164W TLG1Q03322 224 aa9.21□□□□□ -0.94
SHH4YLR164W TPP1Q03796 238 aa9.21□□□□□ -0.94
SHH4YLR164W AI4P03878 556 aa9.2□□□□□ -0.94
SHH4YLR164W CAR2P07991 424 aaKnown RBP9.2□□□□□ -0.94
SHH4YLR164W DAT1P13483 248 aaKnown RBP9.2□□□□□ -0.94
SHH4YLR164W CMK1P27466 446 aaKnown RBP9.2□□□□□ -0.94
SHH4YLR164W ITR2P30606 609 aa9.2□□□□□ -0.94
SHH4YLR164W PRP19P32523 503 aaKnown RBP9.2□□□□□ -0.94
SHH4YLR164W PRP21P32524 280 aaPredicted RBP9.2□□□□□ -0.94
SHH4YLR164W SEC61P32915 480 aa9.2□□□□□ -0.94
SHH4YLR164W ARC19P33204 171 aaKnown RBP9.2□□□□□ -0.94
SHH4YLR164W FAA3P39002 694 aa9.2□□□□□ -0.94
SHH4YLR164W VPS52P39904 641 aa9.2□□□□□ -0.94
SHH4YLR164W RRG9P40156 214 aa9.2□□□□□ -0.94
SHH4YLR164W MSS2P40990 351 aa9.2□□□□□ -0.94
SHH4YLR164W SPT20P50875 604 aa9.2□□□□□ -0.94
SHH4YLR164W SLD3P53135 668 aa9.2□□□□□ -0.94
SHH4YLR164W LCL3P53153 274 aa9.2□□□□□ -0.94
SHH4YLR164W COG5P53951 403 aa9.2□□□□□ -0.94
SHH4YLR164W PST2Q12335 198 aaKnown RBP9.2□□□□□ -0.94
SHH4YLR164W NPC2Q12408 173 aa9.2□□□□□ -0.94
SHH4YLR164W YPR015CQ12531 247 aa9.2□□□□□ -0.94
SHH4YLR164W AI1P03875 834 aa9.19□□□□□ -0.94
SHH4YLR164W YSF3P0C074 85 aaPredicted RBP9.19□□□□□ -0.94
SHH4YLR164W STE4P18851 423 aa9.19□□□□□ -0.94
SHH4YLR164W MRPS28P21771 286 aa9.19□□□□□ -0.94
SHH4YLR164W YKL077WP36081 392 aa9.19□□□□□ -0.94
SHH4YLR164W SBE22P38814 852 aa9.19□□□□□ -0.94
SHH4YLR164W ALR2P43553 858 aa9.19□□□□□ -0.94
SHH4YLR164W DBP6P53734 629 aaKnown RBP9.19□□□□□ -0.94
SHH4YLR164W YMR210WQ03649 449 aa9.19□□□□□ -0.94
SHH4YLR164W YMD8Q03697 442 aa9.19□□□□□ -0.94
SHH4YLR164W ENT2Q05785 613 aa9.19□□□□□ -0.94
SHH4YLR164W EMG1Q06287 252 aaKnown RBP9.19□□□□□ -0.94
SHH4YLR164W PSF1Q12488 208 aa9.19□□□□□ -0.94
SHH4YLR164W VCX1Q99385 411 aa9.19□□□□□ -0.94
SHH4YLR164W FAS1P07149 2051 aaKnown RBP9.19□□□□□ -0.94
SHH4YLR164W COX1P00401 534 aa9.18□□□□□ -0.94
SHH4YLR164W SAM35P14693 329 aa9.18□□□□□ -0.94
SHH4YLR164W GLK1P17709 500 aaKnown RBP9.18□□□□□ -0.94
SHH4YLR164W VPH2P32341 215 aa9.18□□□□□ -0.94
SHH4YLR164W HIR2P32480 875 aa9.18□□□□□ -0.94
SHH4YLR164W WBP1P33767 430 aaKnown RBP9.18□□□□□ -0.94
SHH4YLR164W RTC2P38279 296 aa9.18□□□□□ -0.94
SHH4YLR164W GOS1P38736 223 aa9.18□□□□□ -0.94
SHH4YLR164W SSZ1P38788 538 aaKnown RBP9.18□□□□□ -0.94
SHH4YLR164W ALP1P38971 573 aa9.18□□□□□ -0.94
SHH4YLR164W SWP82P43554 623 aa9.18□□□□□ -0.94
SHH4YLR164W YJR141WP47172 347 aaPredicted RBP9.18□□□□□ -0.94
SHH4YLR164W BUD9P53226 547 aa9.18□□□□□ -0.94
SHH4YLR164W YGR168CP53293 376 aa9.18□□□□□ -0.94
SHH4YLR164W NCE101Q02820 53 aa9.18□□□□□ -0.94
SHH4YLR164W YGK3Q12222 375 aaPredicted RBP9.18□□□□□ -0.94
SHH4YLR164W PRP46Q12417 451 aaPredicted RBP9.18□□□□□ -0.94
SHH4YLR164W YOL162WP0CF19 215 aa9.17□□□□□ -0.94
SHH4YLR164W KGD1P20967 1014 aaKnown RBP9.17□□□□□ -0.94
SHH4YLR164W YPT7P32939 208 aa9.17□□□□□ -0.94
SHH4YLR164W MCM7P38132 845 aa9.17□□□□□ -0.94
SHH4YLR164W LEU5P38702 357 aa9.17□□□□□ -0.94
SHH4YLR164W IPT1P38954 527 aa9.17□□□□□ -0.94
SHH4YLR164W ISC1P40015 477 aaKnown RBP9.17□□□□□ -0.94
SHH4YLR164W BAT2P47176 376 aaKnown RBP9.17□□□□□ -0.94
SHH4YLR164W SEH1P53011 349 aaKnown RBP9.17□□□□□ -0.94
SHH4YLR164W TMA20P89886 181 aaPredicted RBP9.17□□□□□ -0.94
SHH4YLR164W ERF2Q06551 359 aa9.17□□□□□ -0.94
SHH4YLR164W SPC3Q12133 184 aa9.17□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms