RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W TOD6P34219 525 aa5.06□□□□□ -1.6
SHE10YGL228W SRO77P38163 1010 aa5.06□□□□□ -1.6
SHE10YGL228W YHR097CP38809 366 aaKnown RBP5.06□□□□□ -1.6
SHE10YGL228W CTF8P38877 133 aa5.06□□□□□ -1.6
SHE10YGL228W UME6P39001 836 aa5.06□□□□□ -1.6
SHE10YGL228W SOK1P40317 901 aa5.06□□□□□ -1.6
SHE10YGL228W BIT61P47041 543 aa5.06□□□□□ -1.6
SHE10YGL228W MPC1P53157 130 aaKnown RBP5.06□□□□□ -1.6
SHE10YGL228W YGR067CP53243 804 aa5.06□□□□□ -1.6
SHE10YGL228W TLG1Q03322 224 aa5.06□□□□□ -1.6
SHE10YGL228W YLR345WQ06137 509 aa5.06□□□□□ -1.6
SHE10YGL228W YEH1Q07804 573 aa5.06□□□□□ -1.6
SHE10YGL228W YDL211CQ12121 372 aa5.06□□□□□ -1.6
SHE10YGL228W YOL163WP0CF20 169 aa5.05□□□□□ -1.6
SHE10YGL228W RPL20AP0CX23 172 aaKnown RBP5.05□□□□□ -1.6
SHE10YGL228W RPL20BP0CX24 172 aaPredicted RBP5.05□□□□□ -1.6
SHE10YGL228W MRPS28P21771 286 aa5.05□□□□□ -1.6
SHE10YGL228W RRP7P25368 297 aaPredicted RBP5.05□□□□□ -1.6
SHE10YGL228W YCR100CP25606 316 aa5.05□□□□□ -1.6
SHE10YGL228W VPH2P32341 215 aa5.05□□□□□ -1.6
SHE10YGL228W PRP21P32524 280 aaPredicted RBP5.05□□□□□ -1.6
SHE10YGL228W ARC19P33204 171 aaKnown RBP5.05□□□□□ -1.6
SHE10YGL228W YOR062CP36025 268 aa5.05□□□□□ -1.6
SHE10YGL228W SEA4P38164 1038 aa5.05□□□□□ -1.6
SHE10YGL228W SIC1P38634 284 aa5.05□□□□□ -1.6
SHE10YGL228W SSZ1P38788 538 aaKnown RBP5.05□□□□□ -1.6
SHE10YGL228W SOP4P39543 234 aaPredicted RBP5.05□□□□□ -1.6
SHE10YGL228W AST2P39945 430 aaKnown RBP5.05□□□□□ -1.6
SHE10YGL228W MSS2P40990 351 aa5.05□□□□□ -1.6
SHE10YGL228W SMK1P41808 388 aa5.05□□□□□ -1.6
SHE10YGL228W BAP3P41815 604 aa5.05□□□□□ -1.6
SHE10YGL228W QRI7P43122 407 aa5.05□□□□□ -1.6
SHE10YGL228W SNO3P43544 222 aa5.05□□□□□ -1.6
SHE10YGL228W RPS0BP46654 252 aaKnown RBP5.05□□□□□ -1.6
SHE10YGL228W YJR115WP47152 169 aa5.05□□□□□ -1.6
SHE10YGL228W SLD3P53135 668 aa5.05□□□□□ -1.6
SHE10YGL228W MPA43P53583 542 aaPredicted RBP5.05□□□□□ -1.6
SHE10YGL228W COG5P53951 403 aa5.05□□□□□ -1.6
SHE10YGL228W SNP1Q00916 300 aaPredicted RBP5.05□□□□□ -1.6
SHE10YGL228W TRS23Q03784 219 aa5.05□□□□□ -1.6
SHE10YGL228W YDR179W-AQ03983 463 aa5.05□□□□□ -1.6
SHE10YGL228W ENT2Q05785 613 aa5.05□□□□□ -1.6
SHE10YGL228W YPR172WQ06608 200 aa5.05□□□□□ -1.6
SHE10YGL228W CDA2Q06703 312 aa5.05□□□□□ -1.6
SHE10YGL228W NBA1Q08229 501 aaKnown RBP5.05□□□□□ -1.6
SHE10YGL228W BDS1Q08347 646 aa5.05□□□□□ -1.6
SHE10YGL228W PST2Q12335 198 aaKnown RBP5.05□□□□□ -1.6
SHE10YGL228W VCX1Q99385 411 aa5.05□□□□□ -1.6
SHE10YGL228W AI4P03878 556 aa5.04□□□□□ -1.6
SHE10YGL228W PBS2P08018 668 aa5.04□□□□□ -1.6
SHE10YGL228W YSF3P0C074 85 aaPredicted RBP5.04□□□□□ -1.6
SHE10YGL228W RPL40AP0CH08 128 aaKnown RBP5.04□□□□□ -1.6
SHE10YGL228W RPL40BP0CH09 128 aaKnown RBP5.04□□□□□ -1.6
SHE10YGL228W SAM35P14693 329 aa5.04□□□□□ -1.6
SHE10YGL228W ITR2P30606 609 aa5.04□□□□□ -1.6
SHE10YGL228W DCG1P32460 244 aa5.04□□□□□ -1.6
SHE10YGL228W PRP19P32523 503 aaKnown RBP5.04□□□□□ -1.6
SHE10YGL228W SEC61P32915 480 aa5.04□□□□□ -1.6
SHE10YGL228W FAA3P39002 694 aa5.04□□□□□ -1.6
SHE10YGL228W PAC1P39946 494 aaKnown RBP5.04□□□□□ -1.6
SHE10YGL228W RRG9P40156 214 aa5.04□□□□□ -1.6
SHE10YGL228W YJR141WP47172 347 aaPredicted RBP5.04□□□□□ -1.6
SHE10YGL228W YGR168CP53293 376 aa5.04□□□□□ -1.6
SHE10YGL228W RNH70P53331 553 aa5.04□□□□□ -1.6
SHE10YGL228W DBP6P53734 629 aaKnown RBP5.04□□□□□ -1.6
SHE10YGL228W TMA20P89886 181 aaPredicted RBP5.04□□□□□ -1.6
SHE10YGL228W SPO19Q03029 223 aa5.04□□□□□ -1.6
SHE10YGL228W TPP1Q03796 238 aa5.04□□□□□ -1.6
SHE10YGL228W ATG17Q06410 417 aa5.04□□□□□ -1.6
SHE10YGL228W PSF1Q12488 208 aa5.04□□□□□ -1.6
SHE10YGL228W CAR2P07991 424 aaKnown RBP5.03□□□□□ -1.6
SHE10YGL228W BUD5P25300 642 aaPredicted RBP5.03□□□□□ -1.6
SHE10YGL228W RPC82P32349 654 aa5.03□□□□□ -1.6
SHE10YGL228W MKK2P32491 506 aa5.03□□□□□ -1.6
SHE10YGL228W SBE22P38814 852 aa5.03□□□□□ -1.6
SHE10YGL228W VPS52P39904 641 aa5.03□□□□□ -1.6
SHE10YGL228W YEL068CP39977 110 aa5.03□□□□□ -1.6
SHE10YGL228W YNL208WP40159 199 aaKnown RBP5.03□□□□□ -1.6
SHE10YGL228W ALR2P43553 858 aa5.03□□□□□ -1.6
SHE10YGL228W SWP82P43554 623 aa5.03□□□□□ -1.6
SHE10YGL228W SPT20P50875 604 aa5.03□□□□□ -1.6
SHE10YGL228W YMD8Q03697 442 aa5.03□□□□□ -1.6
SHE10YGL228W EMG1Q06287 252 aaKnown RBP5.03□□□□□ -1.6
SHE10YGL228W CRT10Q08226 957 aa5.03□□□□□ -1.6
SHE10YGL228W YGK3Q12222 375 aaPredicted RBP5.03□□□□□ -1.6
SHE10YGL228W NPC2Q12408 173 aa5.03□□□□□ -1.6
SHE10YGL228W YPR015CQ12531 247 aa5.03□□□□□ -1.6
SHE10YGL228W MED11Q99278 115 aa5.03□□□□□ -1.6
SHE10YGL228W AI1P03875 834 aa5.03□□□□□ -1.6
SHE10YGL228W DAT1P13483 248 aaKnown RBP5.03□□□□□ -1.6
SHE10YGL228W GLK1P17709 500 aaKnown RBP5.03□□□□□ -1.6
SHE10YGL228W KGD1P20967 1014 aaKnown RBP5.03□□□□□ -1.6
SHE10YGL228W HIR2P32480 875 aa5.03□□□□□ -1.6
SHE10YGL228W EMP70P32802 667 aa5.03□□□□□ -1.6
SHE10YGL228W YKL077WP36081 392 aa5.03□□□□□ -1.6
SHE10YGL228W MCM7P38132 845 aa5.03□□□□□ -1.6
SHE10YGL228W RTC2P38279 296 aa5.03□□□□□ -1.6
SHE10YGL228W GOS1P38736 223 aa5.03□□□□□ -1.6
SHE10YGL228W IPT1P38954 527 aa5.03□□□□□ -1.6
SHE10YGL228W ALP1P38971 573 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 120.4 ms