RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W TMS1Q12116 473 aa5.22□□□□□ -1.57
FOB1YDR110W MF(ALPHA)1P01149 165 aa5.21□□□□□ -1.58
FOB1YDR110W SCEIP03882 235 aa5.21□□□□□ -1.58
FOB1YDR110W RPS4AP0CX35 261 aaKnown RBP5.21□□□□□ -1.58
FOB1YDR110W RPS4BP0CX36 261 aaKnown RBP5.21□□□□□ -1.58
FOB1YDR110W ELO2P25358 347 aa5.21□□□□□ -1.58
FOB1YDR110W DER1P38307 211 aa5.21□□□□□ -1.58
FOB1YDR110W PRS2P38620 318 aaKnown RBP5.21□□□□□ -1.58
FOB1YDR110W SEN34P39707 275 aa5.21□□□□□ -1.58
FOB1YDR110W PTC2P39966 464 aaKnown RBP5.21□□□□□ -1.58
FOB1YDR110W COS12P53053 380 aa5.21□□□□□ -1.58
FOB1YDR110W YGL235WP53071 178 aa5.21□□□□□ -1.58
FOB1YDR110W YGR045CP53229 120 aa5.21□□□□□ -1.58
FOB1YDR110W ZRG17P53735 605 aa5.21□□□□□ -1.58
FOB1YDR110W PRS5Q12265 496 aaKnown RBP5.21□□□□□ -1.58
FOB1YDR110W SFM1Q12314 213 aa5.21□□□□□ -1.58
FOB1YDR110W EMP46Q12396 444 aa5.21□□□□□ -1.58
FOB1YDR110W RRI1Q12468 440 aa5.21□□□□□ -1.58
FOB1YDR110W RMD5Q12508 421 aa5.21□□□□□ -1.58
FOB1YDR110W TY3B-IQ7LHG5 1498 aaKnown RBP5.21□□□□□ -1.58
FOB1YDR110W ATP6P00854 259 aa5.2□□□□□ -1.58
FOB1YDR110W YBR121C-AP0C5L4 52 aa5.2□□□□□ -1.58
FOB1YDR110W COS2P0CX12 379 aa5.2□□□□□ -1.58
FOB1YDR110W COS3P0CX13 379 aa5.2□□□□□ -1.58
FOB1YDR110W TUP1P16649 713 aa5.2□□□□□ -1.58
FOB1YDR110W NAR1P23503 491 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W YCR101CP25607 182 aa5.2□□□□□ -1.58
FOB1YDR110W CAM1P29547 415 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W AIM3P38266 947 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W MED8P38304 223 aa5.2□□□□□ -1.58
FOB1YDR110W VBA2P38358 474 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W YNG2P38806 282 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W SAK1P38990 1142 aa5.2□□□□□ -1.58
FOB1YDR110W RPN3P40016 523 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W ALG8P40351 577 aa5.2□□□□□ -1.58
FOB1YDR110W UBX6P47049 396 aa5.2□□□□□ -1.58
FOB1YDR110W LSC2P53312 427 aa5.2□□□□□ -1.58
FOB1YDR110W WHI4Q07655 649 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W DIA2Q08496 732 aaPredicted RBP5.2□□□□□ -1.58
FOB1YDR110W YPL150WQ12152 901 aa5.2□□□□□ -1.58
FOB1YDR110W WTM1Q12363 437 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W RPO41P13433 1351 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W SIR3P06701 978 aa5.2□□□□□ -1.58
FOB1YDR110W ERG20P08524 352 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W MAS2P11914 482 aa5.2□□□□□ -1.58
FOB1YDR110W PDC5P16467 563 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W HSP30P25619 332 aa5.2□□□□□ -1.58
FOB1YDR110W ARA1P38115 344 aa5.2□□□□□ -1.58
FOB1YDR110W FZO1P38297 855 aa5.2□□□□□ -1.58
FOB1YDR110W IMD2P38697 523 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W UFE1P41834 346 aa5.2□□□□□ -1.58
FOB1YDR110W SFH5P47008 294 aa5.2□□□□□ -1.58
FOB1YDR110W YDL186WP48568 277 aa5.2□□□□□ -1.58
FOB1YDR110W NAS6P50086 228 aa5.2□□□□□ -1.58
FOB1YDR110W SBH2P52871 88 aa5.2□□□□□ -1.58
FOB1YDR110W NIF3P53081 288 aa5.2□□□□□ -1.58
FOB1YDR110W PUS2P53167 370 aa5.2□□□□□ -1.58
FOB1YDR110W NCE103P53615 221 aa5.2□□□□□ -1.58
FOB1YDR110W YPL080CQ02826 108 aa5.2□□□□□ -1.58
FOB1YDR110W PEX10Q05568 337 aa5.2□□□□□ -1.58
FOB1YDR110W RIF2Q06208 395 aa5.2□□□□□ -1.58
FOB1YDR110W SHS1Q07657 551 aa5.2□□□□□ -1.58
FOB1YDR110W PER33Q12144 273 aa5.2□□□□□ -1.58
FOB1YDR110W AIM45Q12480 344 aaKnown RBP5.2□□□□□ -1.58
FOB1YDR110W SNF8Q12483 233 aa5.2□□□□□ -1.58
FOB1YDR110W AAC1P04710 309 aa5.19□□□□□ -1.58
FOB1YDR110W PUT1P09368 476 aa5.19□□□□□ -1.58
FOB1YDR110W SNF3P10870 884 aa5.19□□□□□ -1.58
FOB1YDR110W NMT1P14743 455 aa5.19□□□□□ -1.58
FOB1YDR110W ATP10P18496 279 aa5.19□□□□□ -1.58
FOB1YDR110W DAL82P21705 255 aa5.19□□□□□ -1.58
FOB1YDR110W AMD2P22580 549 aa5.19□□□□□ -1.58
FOB1YDR110W LRE1P25579 583 aaKnown RBP5.19□□□□□ -1.58
FOB1YDR110W UBC8P28263 218 aa5.19□□□□□ -1.58
FOB1YDR110W IDH1P28834 360 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
FOB1YDR110W NDC1P32500 655 aa5.19□□□□□ -1.58
FOB1YDR110W YSC83P32792 385 aa5.19□□□□□ -1.58
FOB1YDR110W PDR3P33200 976 aa5.19□□□□□ -1.58
FOB1YDR110W YKL162CP36052 402 aa5.19□□□□□ -1.58
FOB1YDR110W YER130CP39959 443 aa5.19□□□□□ -1.58
FOB1YDR110W COA1P40452 197 aa5.19□□□□□ -1.58
FOB1YDR110W SWP82P43554 623 aa5.19□□□□□ -1.58
FOB1YDR110W SSY5P47002 699 aa5.19□□□□□ -1.58
FOB1YDR110W HOC1P47124 396 aa5.19□□□□□ -1.58
FOB1YDR110W LYS20P48570 428 aaKnown RBP5.19□□□□□ -1.58
FOB1YDR110W YNR066CP53752 436 aa5.19□□□□□ -1.58
FOB1YDR110W CSM3Q04659 317 aa5.19□□□□□ -1.58
FOB1YDR110W POS5Q06892 414 aa5.19□□□□□ -1.58
FOB1YDR110W SYO1Q07395 620 aa5.19□□□□□ -1.58
FOB1YDR110W PEX27Q08580 376 aa5.19□□□□□ -1.58
FOB1YDR110W AKR2Q12013 749 aa5.19□□□□□ -1.58
FOB1YDR110W SLF1Q12034 447 aaKnown RBP5.19□□□□□ -1.58
FOB1YDR110W CHO2P05374 869 aaKnown RBP5.18□□□□□ -1.58
FOB1YDR110W NFT1P0CE68 1218 aa5.18□□□□□ -1.58
FOB1YDR110W ECM25P32525 599 aa5.18□□□□□ -1.58
FOB1YDR110W YBR144CP34215 104 aa5.18□□□□□ -1.58
FOB1YDR110W GMH1P36125 273 aa5.18□□□□□ -1.58
FOB1YDR110W AHP1P38013 176 aaKnown RBP5.18□□□□□ -1.58
FOB1YDR110W BDH1P39714 382 aa5.18□□□□□ -1.58
FOB1YDR110W YAT2P40017 923 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms