RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C FRE3Q08905 711 aa3.05□□□□□ -1.92
LCB4YOR171C GPM2Q12008 311 aa3.05□□□□□ -1.92
LCB4YOR171C PAA1Q12447 191 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C PDE2P06776 526 aa3.05□□□□□ -1.92
LCB4YOR171C QCR2P07257 368 aa3.05□□□□□ -1.92
LCB4YOR171C ARD1P07347 238 aaPredicted RBP3.05□□□□□ -1.92
LCB4YOR171C YML003WP0CF16 290 aa3.05□□□□□ -1.92
LCB4YOR171C PDA1P16387 420 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C ALG1P16661 449 aa3.05□□□□□ -1.92
LCB4YOR171C STE18P18852 110 aa3.05□□□□□ -1.92
LCB4YOR171C PPH22P23595 377 aa3.05□□□□□ -1.92
LCB4YOR171C DBR1P24309 405 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C CTR86P25355 563 aa3.05□□□□□ -1.92
LCB4YOR171C LRE1P25579 583 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C SKG6P32900 734 aaPredicted RBP3.05□□□□□ -1.92
LCB4YOR171C RPC34P32910 317 aa3.05□□□□□ -1.92
LCB4YOR171C RPC25P35718 212 aa3.05□□□□□ -1.92
LCB4YOR171C CBT1P36038 271 aaPredicted RBP3.05□□□□□ -1.92
LCB4YOR171C DTR1P38125 572 aa3.05□□□□□ -1.92
LCB4YOR171C LDB7P38210 180 aa3.05□□□□□ -1.92
LCB4YOR171C PFS1P38872 237 aa3.05□□□□□ -1.92
LCB4YOR171C ALP1P38971 573 aa3.05□□□□□ -1.92
LCB4YOR171C UTP25P40498 721 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C HXT9P40885 567 aa3.05□□□□□ -1.92
LCB4YOR171C YJL043WP47053 257 aa3.05□□□□□ -1.92
LCB4YOR171C COS5P47187 383 aa3.05□□□□□ -1.92
LCB4YOR171C YGL204CP53089 101 aa3.05□□□□□ -1.92
LCB4YOR171C YIP3P53633 176 aa3.05□□□□□ -1.92
LCB4YOR171C RCF2P53721 224 aa3.05□□□□□ -1.92
LCB4YOR171C MTQ1P53944 314 aa3.05□□□□□ -1.92
LCB4YOR171C HXT11P54862 567 aa3.05□□□□□ -1.92
LCB4YOR171C RMI1Q02685 241 aa3.05□□□□□ -1.92
LCB4YOR171C EMI2Q04409 500 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C KRE28Q04431 385 aa3.05□□□□□ -1.92
LCB4YOR171C COS7Q07788 383 aa3.05□□□□□ -1.92
LCB4YOR171C VAM3Q12241 283 aa3.05□□□□□ -1.92
LCB4YOR171C AI5_ALPHAQ9ZZX1 630 aa3.05□□□□□ -1.92
LCB4YOR171C THP2O13539 261 aaKnown RBP3.04□□□□□ -1.92
LCB4YOR171C COX1P00401 534 aa3.04□□□□□ -1.92
LCB4YOR171C COX2P00410 251 aa3.04□□□□□ -1.92
LCB4YOR171C ILV2P07342 687 aaKnown RBP3.04□□□□□ -1.92
LCB4YOR171C SNA3P14359 133 aa3.04□□□□□ -1.92
LCB4YOR171C YPS1P32329 569 aa3.04□□□□□ -1.92
LCB4YOR171C FRE1P32791 686 aa3.04□□□□□ -1.92
LCB4YOR171C SKT5P34226 696 aa3.04□□□□□ -1.92
LCB4YOR171C HES1P35843 434 aa3.04□□□□□ -1.92
LCB4YOR171C RPF2P36160 344 aaKnown RBP3.04□□□□□ -1.92
LCB4YOR171C SSH1P38353 490 aaKnown RBP3.04□□□□□ -1.92
LCB4YOR171C VBA2P38358 474 aaKnown RBP3.04□□□□□ -1.92
LCB4YOR171C FET3P38993 636 aa3.04□□□□□ -1.92
LCB4YOR171C CCT2P39076 527 aaKnown RBP3.04□□□□□ -1.92
LCB4YOR171C VAB2P40003 282 aa3.04□□□□□ -1.92
LCB4YOR171C JLP2P40206 208 aa3.04□□□□□ -1.92
LCB4YOR171C VHS2P40463 436 aa3.04□□□□□ -1.92
LCB4YOR171C IRC7P43623 340 aa3.04□□□□□ -1.92
LCB4YOR171C TAX4P47030 604 aa3.04□□□□□ -1.92
LCB4YOR171C YJR154WP47181 346 aa3.04□□□□□ -1.92
LCB4YOR171C RPS7BP48164 190 aaKnown RBP3.04□□□□□ -1.92
LCB4YOR171C NOP19P53317 196 aaPredicted RBP3.04□□□□□ -1.92
LCB4YOR171C TRM112P53738 135 aaPredicted RBP3.04□□□□□ -1.92
LCB4YOR171C PRP38Q00723 242 aaPredicted RBP3.04□□□□□ -1.92
LCB4YOR171C MMT1Q03218 510 aa3.04□□□□□ -1.92
LCB4YOR171C SLD5Q03406 294 aa3.04□□□□□ -1.92
LCB4YOR171C YMR209CQ03648 457 aa3.04□□□□□ -1.92
LCB4YOR171C YDR248CQ03786 193 aa3.04□□□□□ -1.92
LCB4YOR171C FIN1Q03898 291 aa3.04□□□□□ -1.92
LCB4YOR171C ARO80Q04052 950 aa3.04□□□□□ -1.92
LCB4YOR171C RRP45Q05636 305 aaKnown RBP3.04□□□□□ -1.92
LCB4YOR171C RAD34Q06665 692 aa3.04□□□□□ -1.92
LCB4YOR171C MRPL35Q06678 367 aa3.04□□□□□ -1.92
LCB4YOR171C OSW1Q08692 278 aa3.04□□□□□ -1.92
LCB4YOR171C YOR365CQ08844 703 aa3.04□□□□□ -1.92
LCB4YOR171C RSA1Q08932 381 aa3.04□□□□□ -1.92
LCB4YOR171C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
LCB4YOR171C RLM1Q12224 676 aa3.04□□□□□ -1.92
LCB4YOR171C AI5_BETAQ9ZZX0 354 aa3.04□□□□□ -1.92
LCB4YOR171C YPT1P01123 206 aaKnown RBP3.03□□□□□ -1.92
LCB4YOR171C RPS16AP0CX51 143 aaKnown RBP3.03□□□□□ -1.92
LCB4YOR171C RPS16BP0CX52 143 aaKnown RBP3.03□□□□□ -1.92
LCB4YOR171C ILV6P25605 309 aaKnown RBP3.03□□□□□ -1.92
LCB4YOR171C RFA2P26754 273 aaKnown RBP3.03□□□□□ -1.92
LCB4YOR171C VMA6P32366 345 aaKnown RBP3.03□□□□□ -1.92
LCB4YOR171C MNS1P32906 549 aa3.03□□□□□ -1.92
LCB4YOR171C LOS1P33418 1100 aaPredicted RBP3.03□□□□□ -1.92
LCB4YOR171C ASC1P38011 319 aaKnown RBP3.03□□□□□ -1.92
LCB4YOR171C RPH1P39956 796 aa3.03□□□□□ -1.92
LCB4YOR171C POG1P40473 351 aa3.03□□□□□ -1.92
LCB4YOR171C IMD4P50094 524 aaKnown RBP3.03□□□□□ -1.92
LCB4YOR171C SPP2Q02521 185 aa3.03□□□□□ -1.92
LCB4YOR171C RIM13Q03792 727 aa3.03□□□□□ -1.92
LCB4YOR171C DAP1Q12091 152 aa3.03□□□□□ -1.92
LCB4YOR171C MED2Q12124 431 aa3.03□□□□□ -1.92
LCB4YOR171C BAG7Q12128 409 aa3.03□□□□□ -1.92
LCB4YOR171C RAD50P12753 1312 aa3.03□□□□□ -1.92
LCB4YOR171C CAR1P00812 333 aaKnown RBP3.03□□□□□ -1.93
LCB4YOR171C ATP1P07251 545 aaKnown RBP3.03□□□□□ -1.93
LCB4YOR171C CBS2P14905 389 aa3.03□□□□□ -1.93
LCB4YOR171C HXT2P23585 541 aa3.03□□□□□ -1.93
LCB4YOR171C YSP3P25036 478 aa3.03□□□□□ -1.93
LCB4YOR171C PTP1P25044 335 aa3.03□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms