RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C PCL9Q12477 304 aa0.4□□□□□ -2.35
NIP1YMR309C ROX1P25042 368 aa0.39□□□□□ -2.35
NIP1YMR309C SLM5P25345 492 aaKnown RBP0.39□□□□□ -2.35
NIP1YMR309C GIT1P25346 518 aa0.39□□□□□ -2.35
NIP1YMR309C IMP2'P32351 346 aa0.39□□□□□ -2.35
NIP1YMR309C ECT1P33412 323 aa0.39□□□□□ -2.35
NIP1YMR309C AST1P35183 429 aa0.39□□□□□ -2.35
NIP1YMR309C ANR2P36090 516 aaPredicted RBP0.39□□□□□ -2.35
NIP1YMR309C NOC2P39744 710 aaKnown RBP0.39□□□□□ -2.35
NIP1YMR309C ALD5P40047 520 aaKnown RBP0.39□□□□□ -2.35
NIP1YMR309C COQ5P49017 307 aa0.39□□□□□ -2.35
NIP1YMR309C CWC22P53333 577 aaKnown RBP0.39□□□□□ -2.35
NIP1YMR309C RNH201P53942 307 aa0.39□□□□□ -2.35
NIP1YMR309C REX2P54964 269 aaKnown RBP0.39□□□□□ -2.35
NIP1YMR309C KAP120Q02932 1032 aa0.39□□□□□ -2.35
NIP1YMR309C MRX8Q05473 314 aa0.39□□□□□ -2.35
NIP1YMR309C SRO7Q12038 1033 aa0.39□□□□□ -2.35
NIP1YMR309C VPS54Q12071 889 aa0.39□□□□□ -2.35
NIP1YMR309C MED2Q12124 431 aa0.39□□□□□ -2.35
NIP1YMR309C TIR4Q12218 487 aaPredicted RBP0.39□□□□□ -2.35
NIP1YMR309C YDR061WQ12298 539 aa0.39□□□□□ -2.35
NIP1YMR309C YDL199CQ12407 687 aa0.39□□□□□ -2.35
NIP1YMR309C TPK3P05986 398 aa0.39□□□□□ -2.35
NIP1YMR309C COS9P36034 407 aa0.39□□□□□ -2.35
NIP1YMR309C DOA1P36037 715 aa0.39□□□□□ -2.35
NIP1YMR309C GEP4P38812 185 aa0.39□□□□□ -2.35
NIP1YMR309C CHL4P38907 458 aa0.39□□□□□ -2.35
NIP1YMR309C ATM1P40416 690 aa0.39□□□□□ -2.35
NIP1YMR309C GPD2P41911 440 aaKnown RBP0.39□□□□□ -2.35
NIP1YMR309C PGU1P47180 361 aa0.39□□□□□ -2.35
NIP1YMR309C URH1Q04179 340 aa0.39□□□□□ -2.35
NIP1YMR309C TSR2Q06672 205 aaKnown RBP0.39□□□□□ -2.35
NIP1YMR309C LDB17Q12342 491 aa0.39□□□□□ -2.35
NIP1YMR309C YOL159C-AQ3E769 90 aa0.39□□□□□ -2.35
NIP1YMR309C AFI1Q99222 893 aa0.39□□□□□ -2.35
NIP1YMR309C SAL1D6W196 494 aa0.38□□□□□ -2.35
NIP1YMR309C INH1P01097 85 aa0.38□□□□□ -2.35
NIP1YMR309C ADE4P04046 510 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C PDE2P06776 526 aa0.38□□□□□ -2.35
NIP1YMR309C ALG1P16661 449 aa0.38□□□□□ -2.35
NIP1YMR309C YCR051WP25631 222 aa0.38□□□□□ -2.35
NIP1YMR309C ERG3P32353 365 aa0.38□□□□□ -2.35
NIP1YMR309C PDC2P32896 925 aa0.38□□□□□ -2.35
NIP1YMR309C HEL1P36113 551 aa0.38□□□□□ -2.35
NIP1YMR309C OLA1P38219 394 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C LSM12P38828 187 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C GPI16P38875 610 aa0.38□□□□□ -2.35
NIP1YMR309C YIL059CP40520 121 aa0.38□□□□□ -2.35
NIP1YMR309C VHT1P53241 593 aa0.38□□□□□ -2.35
NIP1YMR309C YGR067CP53243 804 aa0.38□□□□□ -2.35
NIP1YMR309C YGR117CP53270 476 aa0.38□□□□□ -2.35
NIP1YMR309C ARX1Q03862 593 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C FSH2Q05015 223 aa0.38□□□□□ -2.35
NIP1YMR309C MSC3Q05812 728 aa0.38□□□□□ -2.35
NIP1YMR309C YLR177WQ06251 628 aa0.38□□□□□ -2.35
NIP1YMR309C YDL114WQ07530 308 aa0.38□□□□□ -2.35
NIP1YMR309C DDC1Q08949 612 aa0.38□□□□□ -2.35
NIP1YMR309C SFI1Q12369 946 aa0.38□□□□□ -2.35
NIP1YMR309C APC2Q12440 853 aa0.38□□□□□ -2.35
NIP1YMR309C MTR10Q99189 972 aa0.38□□□□□ -2.35
NIP1YMR309C MEX67Q99257 599 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C FLO11P08640 1367 aa0.38□□□□□ -2.35
NIP1YMR309C AUS1Q08409 1394 aa0.38□□□□□ -2.35
NIP1YMR309C STE2D6VTK4 431 aa0.38□□□□□ -2.35
NIP1YMR309C TPI1P00942 248 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C PAB1P04147 577 aaKnown RBP RIP-Chip data0.38□□□□□ -2.35not detected
NIP1YMR309C SSC1P0CS90 654 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C RPS18AP0CX55 146 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C RPS18BP0CX56 146 aaPredicted RBP0.38□□□□□ -2.35
NIP1YMR309C FUR1P18562 216 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C FUN26P31381 517 aa0.38□□□□□ -2.35
NIP1YMR309C SKG6P32900 734 aaPredicted RBP0.38□□□□□ -2.35
NIP1YMR309C TIR2P33890 251 aa0.38□□□□□ -2.35
NIP1YMR309C SKT5P34226 696 aa0.38□□□□□ -2.35
NIP1YMR309C PRY2P36110 329 aa0.38□□□□□ -2.35
NIP1YMR309C INM1P38710 295 aa0.38□□□□□ -2.35
NIP1YMR309C FHL1P39521 936 aa0.38□□□□□ -2.35
NIP1YMR309C RRT13P40042 185 aa0.38□□□□□ -2.35
NIP1YMR309C GAT2P40209 560 aa0.38□□□□□ -2.35
NIP1YMR309C STB1P42845 420 aa0.38□□□□□ -2.35
NIP1YMR309C IRC6P43615 237 aa0.38□□□□□ -2.35
NIP1YMR309C PRP38Q00723 242 aaPredicted RBP0.38□□□□□ -2.35
NIP1YMR309C ERO1Q03103 563 aa0.38□□□□□ -2.35
NIP1YMR309C ACL4Q03771 387 aa0.38□□□□□ -2.35
NIP1YMR309C ROY1Q04847 553 aa0.38□□□□□ -2.35
NIP1YMR309C YLR287CQ05881 355 aa0.38□□□□□ -2.35
NIP1YMR309C FAR10Q06001 478 aa0.38□□□□□ -2.35
NIP1YMR309C SNT309Q06091 175 aaPredicted RBP0.38□□□□□ -2.35
NIP1YMR309C AEP3Q12089 606 aa0.38□□□□□ -2.35
NIP1YMR309C RUP1Q12242 671 aa0.38□□□□□ -2.35
NIP1YMR309C YOP1Q12402 180 aa0.38□□□□□ -2.35
NIP1YMR309C BEM2P39960 2167 aaKnown RBP0.38□□□□□ -2.35
NIP1YMR309C LDS1P31379 325 aa0.37□□□□□ -2.35
NIP1YMR309C HSP104P31539 908 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C DBF4P32325 704 aa0.37□□□□□ -2.35
NIP1YMR309C RIM1P32445 135 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C SPS19P32573 292 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C SPO23P33757 523 aa0.37□□□□□ -2.35
NIP1YMR309C MCR1P36060 302 aaKnown RBP0.37□□□□□ -2.35
NIP1YMR309C NDE1P40215 560 aa0.37□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms