RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU70	YMR284W	RRT13	P40042	185 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	SPO22	P40511	975 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	FMS1	P50264	508 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	NBP1	P52919	319 aa	Predicted RBP	0.61	□□□□□ -2.31
YKU70	YMR284W	JJJ1	P53863	590 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	URH1	Q04179	340 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	YLR177W	Q06251	628 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	YOR376W	Q08900	122 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	VAM3	Q12241	283 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	HSP42	Q12329	375 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	YOR338W	Q99326	363 aa		0.61	□□□□□ -2.31
YKU70	YMR284W	MKK1	P32490	508 aa		0.6	□□□□□ -2.31
YKU70	YMR284W	DBP7	P36120	742 aa	Known RBP	0.6	□□□□□ -2.31
YKU70	YMR284W	RRP46	P53256	223 aa	Predicted RBP	0.6	□□□□□ -2.31
YKU70	YMR284W	RGM1	Q00453	211 aa		0.6	□□□□□ -2.31
YKU70	YMR284W	PRP38	Q00723	242 aa	Predicted RBP	0.6	□□□□□ -2.31
YKU70	YMR284W	MIX17	Q03667	156 aa		0.6	□□□□□ -2.31
YKU70	YMR284W	SRO7	Q12038	1033 aa		0.6	□□□□□ -2.31
YKU70	YMR284W	RPS23A	P0CX29	145 aa	Known RBP	0.59	□□□□□ -2.31
YKU70	YMR284W	RPS23B	P0CX30	145 aa		0.59	□□□□□ -2.31
YKU70	YMR284W	PWP2	P25635	923 aa	Known RBP	0.59	□□□□□ -2.31
YKU70	YMR284W	DBF4	P32325	704 aa		0.59	□□□□□ -2.31
YKU70	YMR284W	ECM8	P38246	354 aa		0.59	□□□□□ -2.31
YKU70	YMR284W	HEM14	P40012	539 aa		0.59	□□□□□ -2.31
YKU70	YMR284W	KEG1	P43614	200 aa		0.59	□□□□□ -2.31
YKU70	YMR284W	STD1	Q02794	444 aa		0.59	□□□□□ -2.31
YKU70	YMR284W	SSH4	P32343	579 aa		0.59	□□□□□ -2.32
YKU70	YMR284W	ALK2	P32789	676 aa	Predicted RBP	0.59	□□□□□ -2.32
YKU70	YMR284W	RAD5	P32849	1169 aa	Predicted RBP	0.59	□□□□□ -2.32
YKU70	YMR284W	SKG6	P32900	734 aa	Predicted RBP	0.59	□□□□□ -2.32
YKU70	YMR284W	RRN10	P38204	145 aa		0.59	□□□□□ -2.32
YKU70	YMR284W	MMS4	P38257	691 aa		0.59	□□□□□ -2.32
YKU70	YMR284W	LSM12	P38828	187 aa	Known RBP	0.59	□□□□□ -2.32
YKU70	YMR284W	ASA1	Q06822	443 aa		0.59	□□□□□ -2.32
YKU70	YMR284W	LDS2	Q08218	356 aa		0.59	□□□□□ -2.32
YKU70	YMR284W	SSC1	P0CS90	654 aa	Known RBP	0.58	□□□□□ -2.32
YKU70	YMR284W	MNP1	P53163	194 aa	Predicted RBP	0.58	□□□□□ -2.32
YKU70	YMR284W	VTA1	Q06263	330 aa		0.58	□□□□□ -2.32
YKU70	YMR284W	YDR056C	Q12025	205 aa		0.58	□□□□□ -2.32
YKU70	YMR284W	POM152	P39685	1337 aa		0.58	□□□□□ -2.32
YKU70	YMR284W	SNF6	P18888	332 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	TKL2	P33315	681 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	VAC7	P53950	1165 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	MSC3	Q05812	728 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	LDB17	Q12342	491 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	YAL067W-A	Q8TGK6	75 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	CKA2	P19454	339 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	SKT5	P34226	696 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	BIO3	P50277	480 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	RMI1	Q02685	241 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	MMT1	Q03218	510 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	COG4	Q06096	861 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	BUG1	Q12191	341 aa		0.57	□□□□□ -2.32
YKU70	YMR284W	FLO11	P08640	1367 aa		0.56	□□□□□ -2.32
YKU70	YMR284W	NIP1	P32497	812 aa	Known RBP	0.56	□□□□□ -2.32
YKU70	YMR284W	SPO23	P33757	523 aa		0.56	□□□□□ -2.32
YKU70	YMR284W	YBR241C	P38142	488 aa		0.56	□□□□□ -2.32
YKU70	YMR284W	YBL081W	P38180	368 aa	Known RBP	0.56	□□□□□ -2.32
YKU70	YMR284W	RNH201	P53942	307 aa		0.56	□□□□□ -2.32
YKU70	YMR284W	REX2	P54964	269 aa	Known RBP	0.56	□□□□□ -2.32
YKU70	YMR284W	RPA49	Q01080	415 aa	Predicted RBP	0.56	□□□□□ -2.32
YKU70	YMR284W	FRE8	Q12209	686 aa		0.56	□□□□□ -2.32
YKU70	YMR284W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.55	□□□□□ -2.32	not detected
YKU70	YMR284W	ARG3	P05150	338 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	RPS18A	P0CX55	146 aa	Known RBP	0.55	□□□□□ -2.32
YKU70	YMR284W	RPS18B	P0CX56	146 aa	Predicted RBP	0.55	□□□□□ -2.32
YKU70	YMR284W	SPS19	P32573	292 aa	Known RBP	0.55	□□□□□ -2.32
YKU70	YMR284W	OTU2	P38747	307 aa	Known RBP	0.55	□□□□□ -2.32
YKU70	YMR284W	SMF1	P38925	575 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	VID27	P40157	782 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	COS5	P47187	383 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	SPR6	Q01684	191 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	MRX11	Q03079	207 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	VTI1	Q04338	217 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	RRP45	Q05636	305 aa	Known RBP	0.55	□□□□□ -2.32
YKU70	YMR284W	COS7	Q07788	383 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	SFM1	Q12314	213 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	PCL9	Q12477	304 aa		0.55	□□□□□ -2.32
YKU70	YMR284W	ATP1	P07251	545 aa	Known RBP	0.54	□□□□□ -2.32
YKU70	YMR284W	ALG1	P16661	449 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	TRX2	P22803	104 aa	Known RBP	0.54	□□□□□ -2.32
YKU70	YMR284W	MIG1	P27705	504 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	ANP1	P32629	500 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	UFE1	P41834	346 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	CTK3	P46963	296 aa	Predicted RBP	0.54	□□□□□ -2.32
YKU70	YMR284W	TRF5	P48561	642 aa	Known RBP	0.54	□□□□□ -2.32
YKU70	YMR284W	YGL088W	P53151	121 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	DIS3	Q08162	1001 aa	Known RBP	0.54	□□□□□ -2.32
YKU70	YMR284W	HMS1	Q12398	434 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	GRX6	Q12438	231 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	SRV2	P17555	526 aa	Known RBP	0.54	□□□□□ -2.32
YKU70	YMR284W	CHA1	P25379	360 aa	Known RBP	0.54	□□□□□ -2.32
YKU70	YMR284W	SHE3	P38272	425 aa	Known RBP	0.54	□□□□□ -2.32
YKU70	YMR284W	GPI16	P38875	610 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	YGL138C	P53122	345 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	YGR117C	P53270	476 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	PLB3	Q08108	686 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	YDL211C	Q12121	372 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	HIF1	Q12373	385 aa		0.54	□□□□□ -2.32
YKU70	YMR284W	ADE4	P04046	510 aa	Known RBP	0.53	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms