RNA–Protein interactions for RNA: YMR270C

RRN9, Transcript of Protein involved in promoting high level transcription of rDNA, yeast

Gene RRN9, Length 1,098 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN9	YMR270C	YNL260C	P53846	198 aa		4.19	□□□□□ -1.74
RRN9	YMR270C	KTR5	P53966	522 aa	Predicted RBP	4.19	□□□□□ -1.74
RRN9	YMR270C	SED5	Q01590	340 aa		4.19	□□□□□ -1.74
RRN9	YMR270C	SHR3	Q02774	210 aa		4.19	□□□□□ -1.74
RRN9	YMR270C	YML122C	Q03207	126 aa		4.19	□□□□□ -1.74
RRN9	YMR270C	HPT1	Q04178	221 aa	Known RBP	4.19	□□□□□ -1.74
RRN9	YMR270C	TEN1	Q07921	160 aa		4.19	□□□□□ -1.74
RRN9	YMR270C	YPT6	Q99260	215 aa		4.19	□□□□□ -1.74
RRN9	YMR270C	YBR085C-A	O43137	85 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	STF1	P01098	86 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	HEM2	P05373	342 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	RAD1	P06777	1100 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	STE3	P06783	470 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RRN9	YMR270C	HEM15	P16622	393 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	CBF1	P17106	351 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	SPS22	P25380	463 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	YCR051W	P25631	222 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	YJU2	P28320	278 aa	Predicted RBP	4.18	□□□□□ -1.74
RRN9	YMR270C	YME1	P32795	747 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	ARO9	P38840	513 aa	Predicted RBP	4.18	□□□□□ -1.74
RRN9	YMR270C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RRN9	YMR270C	GGC1	P38988	300 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	YJL206C	P39529	758 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	NPT1	P39683	429 aa	Known RBP	4.18	□□□□□ -1.74
RRN9	YMR270C	YJR030C	P47101	745 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	IBA57	P47158	497 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	TRM9	P49957	279 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	MUP1	P50276	574 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	IMO32	P53219	342 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	SHY1	P53266	389 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	EFR3	Q03653	782 aa	Known RBP	4.18	□□□□□ -1.74
RRN9	YMR270C	ROY1	Q04847	553 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	FMP45	Q07651	309 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	IZH3	Q07959	543 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	RUD3	Q12234	484 aa	Known RBP	4.18	□□□□□ -1.74
RRN9	YMR270C	PRS5	Q12265	496 aa	Known RBP	4.18	□□□□□ -1.74
RRN9	YMR270C	FRE6	Q12473	712 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	YLR111W	Q12528	110 aa		4.18	□□□□□ -1.74
RRN9	YMR270C	TEF1	P02994	458 aa	Known RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	CDC21	P06785	304 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RRN9	YMR270C	PRP16	P15938	1071 aa	Predicted RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	THR1	P17423	357 aa	Known RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RRN9	YMR270C	REC107	P21651	314 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	ERV1	P27882	189 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	PUP2	P32379	260 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	NIP1	P32497	812 aa	Known RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	RPN2	P32565	945 aa	Known RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	UGP1	P32861	499 aa	Known RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	ELF1	P36053	145 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	CAB3	P36076	571 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	RRN10	P38204	145 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	MUP3	P38734	546 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	LNP1	P38878	278 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	MNL1	P38888	796 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	RPS0B	P46654	252 aa	Known RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	YGR079W	P53249	370 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	BUD32	P53323	261 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	PRP38	Q00723	242 aa	Predicted RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	MRS2	Q01926	470 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	PRP3	Q03338	469 aa	Predicted RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	USA1	Q03714	838 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	YDR239C	Q03780	787 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	GTB1	Q04924	702 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	FRE5	Q08908	694 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	YPL272C	Q08984	517 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	TMS1	Q12116	473 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	MRH1	Q12117	320 aa	Predicted RBP	4.17	□□□□□ -1.74
RRN9	YMR270C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RRN9	YMR270C	YER175W-A	Q8TGU4	54 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	SRN2	Q99176	213 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	ISN1	Q99312	450 aa		4.17	□□□□□ -1.74
RRN9	YMR270C	COX1	P00401	534 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	RPL7A	P05737	244 aa	Known RBP	4.16	□□□□□ -1.74
RRN9	YMR270C	ARD1	P07347	238 aa	Predicted RBP	4.16	□□□□□ -1.74
RRN9	YMR270C	PET111	P08468	800 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RRN9	YMR270C	HES1	P35843	434 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	SOL2	P37262	315 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	CTP1	P38152	299 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	SPP381	P38282	291 aa	Predicted RBP	4.16	□□□□□ -1.74
RRN9	YMR270C	SDH8	P38345	138 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	YHR210C	P38893	341 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	PRP39	P39682	629 aa	Known RBP	4.16	□□□□□ -1.74
RRN9	YMR270C	FRT2	P39734	528 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	YFR020W	P43600	232 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	CTK2	P46962	323 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	IKS1	P47042	667 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	UBX6	P47049	396 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	ERG26	P53199	349 aa	Known RBP	4.16	□□□□□ -1.74
RRN9	YMR270C	FHN1	P53279	174 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	LSC1	P53598	329 aa	Known RBP	4.16	□□□□□ -1.74
RRN9	YMR270C	YPL107W	Q02873	248 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	VPS60	Q03390	229 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	YET2	Q04210	160 aa		4.16	□□□□□ -1.74
RRN9	YMR270C	BUD22	Q04347	519 aa	Known RBP	4.16	□□□□□ -1.74
RRN9	YMR270C	GPN2	Q08726	347 aa	Predicted RBP	4.16	□□□□□ -1.74
RRN9	YMR270C	RPL7B	Q12213	244 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms