RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W TOF1P53840 1238 aa3.39□□□□□ -1.87
CSM3YMR048W HOT1Q03213 719 aa3.39□□□□□ -1.87
CSM3YMR048W YDR131CQ03899 556 aa3.39□□□□□ -1.87
CSM3YMR048W YMR027WQ04371 470 aa3.39□□□□□ -1.87
CSM3YMR048W TSR1Q07381 788 aaKnown RBP3.39□□□□□ -1.87
CSM3YMR048W RBD2Q12270 262 aa3.39□□□□□ -1.87
CSM3YMR048W ERP4Q12450 207 aa3.39□□□□□ -1.87
CSM3YMR048W DUR1,2P32528 1835 aaKnown RBP3.39□□□□□ -1.87
CSM3YMR048W FLO1P32768 1537 aa3.39□□□□□ -1.87
CSM3YMR048W FLO11P08640 1367 aa3.38□□□□□ -1.87
CSM3YMR048W ADH2P00331 348 aaKnown RBP3.38□□□□□ -1.87
CSM3YMR048W ALG1P16661 449 aa3.38□□□□□ -1.87
CSM3YMR048W CKA2P19454 339 aa3.38□□□□□ -1.87
CSM3YMR048W RVS161P25343 265 aaKnown RBP3.38□□□□□ -1.87
CSM3YMR048W CDC60P26637 1090 aaKnown RBP3.38□□□□□ -1.87
CSM3YMR048W SIN4P32259 974 aa3.38□□□□□ -1.87
CSM3YMR048W YKT6P36015 200 aaKnown RBP3.38□□□□□ -1.87
CSM3YMR048W HMF1P40037 129 aaKnown RBP3.38□□□□□ -1.87
CSM3YMR048W LAM5P43560 674 aa3.38□□□□□ -1.87
CSM3YMR048W TRS85P46944 698 aa3.38□□□□□ -1.87
CSM3YMR048W YJR011CP47086 261 aaPredicted RBP3.38□□□□□ -1.87
CSM3YMR048W HMS2P47175 358 aa3.38□□□□□ -1.87
CSM3YMR048W SSN8P47821 323 aa3.38□□□□□ -1.87
CSM3YMR048W LIF1P53150 421 aa3.38□□□□□ -1.87
CSM3YMR048W MRP51Q02950 344 aa3.38□□□□□ -1.87
CSM3YMR048W DCS1Q06151 350 aa3.38□□□□□ -1.87
CSM3YMR048W PKH2Q12236 1081 aaKnown RBP3.38□□□□□ -1.87
CSM3YMR048W ISN1Q99312 450 aa3.38□□□□□ -1.87
CSM3YMR048W HSP82P02829 709 aaKnown RBP3.37□□□□□ -1.87
CSM3YMR048W SPO7P18410 259 aa3.37□□□□□ -1.87
CSM3YMR048W CLN1P20437 546 aa3.37□□□□□ -1.87
CSM3YMR048W BMH1P29311 267 aaKnown RBP3.37□□□□□ -1.87
CSM3YMR048W SLM4P38247 162 aa3.37□□□□□ -1.87
CSM3YMR048W LYS1P38998 373 aaRIP-Chip data3.37□□□□□ -1.87not detected
CSM3YMR048W CUE3P53137 624 aaKnown RBP3.37□□□□□ -1.87
CSM3YMR048W FRE4P53746 719 aa3.37□□□□□ -1.87
CSM3YMR048W GOR1P53839 350 aa3.37□□□□□ -1.87
CSM3YMR048W ACL4Q03771 387 aa3.37□□□□□ -1.87
CSM3YMR048W VPS20Q04272 221 aa3.37□□□□□ -1.87
CSM3YMR048W MED2Q12124 431 aa3.37□□□□□ -1.87
CSM3YMR048W YPR022CQ12139 1133 aa3.37□□□□□ -1.87
CSM3YMR048W ARG4P04076 463 aaPredicted RBP3.36□□□□□ -1.87
CSM3YMR048W HOM3P10869 527 aa3.36□□□□□ -1.87
CSM3YMR048W MDH1P17505 334 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
CSM3YMR048W CPR2P23285 205 aa3.36□□□□□ -1.87
CSM3YMR048W MSP1P28737 362 aa3.36□□□□□ -1.87
CSM3YMR048W IME2P32581 645 aa3.36□□□□□ -1.87
CSM3YMR048W SOR1P35497 357 aaKnown RBP3.36□□□□□ -1.87
CSM3YMR048W PIM1P36775 1133 aa3.36□□□□□ -1.87
CSM3YMR048W PHO88P38264 188 aaPredicted RBP3.36□□□□□ -1.87
CSM3YMR048W SHY1P53266 389 aa3.36□□□□□ -1.87
CSM3YMR048W GYL1Q04322 720 aa3.36□□□□□ -1.87
CSM3YMR048W HRI1Q05905 244 aaKnown RBP3.36□□□□□ -1.87
CSM3YMR048W SPH1Q06160 661 aa3.36□□□□□ -1.87
CSM3YMR048W SOR2Q07786 357 aa3.36□□□□□ -1.87
CSM3YMR048W TIM18Q08749 192 aa3.36□□□□□ -1.87
CSM3YMR048W DDP1Q99321 188 aaKnown RBP3.36□□□□□ -1.87
CSM3YMR048W SNA3P14359 133 aa3.35□□□□□ -1.87
CSM3YMR048W SEC63P14906 663 aa3.35□□□□□ -1.87
CSM3YMR048W PET123P17558 318 aa3.35□□□□□ -1.87
CSM3YMR048W TIP1P27654 210 aaPredicted RBP3.35□□□□□ -1.87
CSM3YMR048W RME1P32338 300 aaKnown RBP3.35□□□□□ -1.87
CSM3YMR048W RIB5P38145 238 aa3.35□□□□□ -1.87
CSM3YMR048W MIX23P38162 196 aa3.35□□□□□ -1.87
CSM3YMR048W RRN10P38204 145 aa3.35□□□□□ -1.87
CSM3YMR048W WWM1P43582 211 aaKnown RBP3.35□□□□□ -1.87
CSM3YMR048W RSC1P53236 928 aa3.35□□□□□ -1.87
CSM3YMR048W OCA2P53949 197 aa3.35□□□□□ -1.87
CSM3YMR048W CIK1Q01649 594 aa3.35□□□□□ -1.87
CSM3YMR048W GIP3Q03016 1276 aa3.35□□□□□ -1.87
CSM3YMR048W BET5Q03630 159 aa3.35□□□□□ -1.87
CSM3YMR048W SXM1Q04175 944 aaKnown RBP3.35□□□□□ -1.87
CSM3YMR048W MDM30Q05930 598 aa3.35□□□□□ -1.87
CSM3YMR048W YLR345WQ06137 509 aa3.35□□□□□ -1.87
CSM3YMR048W MMR1Q06324 491 aa3.35□□□□□ -1.87
CSM3YMR048W SGT1Q08446 395 aa3.35□□□□□ -1.87
CSM3YMR048W TEF1P02994 458 aaKnown RBP3.34□□□□□ -1.87
CSM3YMR048W SCEIP03882 235 aa3.34□□□□□ -1.87
CSM3YMR048W TCP1P12612 559 aaKnown RBP3.34□□□□□ -1.87
CSM3YMR048W SNT1P25357 1226 aa3.34□□□□□ -1.87
CSM3YMR048W SPS22P25380 463 aa3.34□□□□□ -1.87
CSM3YMR048W MCR1P36060 302 aaKnown RBP3.34□□□□□ -1.87
CSM3YMR048W TVP38P36164 337 aa3.34□□□□□ -1.87
CSM3YMR048W OST1P41543 476 aaKnown RBP3.34□□□□□ -1.87
CSM3YMR048W EPL1P43572 832 aa3.34□□□□□ -1.87
CSM3YMR048W TCB2P48231 1178 aa3.34□□□□□ -1.87
CSM3YMR048W PHB2P50085 310 aa3.34□□□□□ -1.87
CSM3YMR048W YML6P51998 286 aa3.34□□□□□ -1.87
CSM3YMR048W FUS2Q05670 677 aa3.34□□□□□ -1.87
CSM3YMR048W CUR1Q06469 252 aa3.34□□□□□ -1.87
CSM3YMR048W YLH47Q06493 454 aa3.34□□□□□ -1.87
CSM3YMR048W SMC5Q08204 1093 aa3.34□□□□□ -1.87
CSM3YMR048W DCI1Q08558 271 aa3.34□□□□□ -1.87
CSM3YMR048W RKM1Q08961 583 aaPredicted RBP3.34□□□□□ -1.87
CSM3YMR048W AEP3Q12089 606 aa3.34□□□□□ -1.87
CSM3YMR048W WTM1Q12363 437 aaKnown RBP3.34□□□□□ -1.87
CSM3YMR048W FRS2P15625 503 aaKnown RBP3.33□□□□□ -1.88
CSM3YMR048W RDS1P25611 832 aa3.33□□□□□ -1.88
CSM3YMR048W PEX5P35056 612 aa3.33□□□□□ -1.88
CSM3YMR048W RFC3P38629 340 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms