RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeast

Gene CCS1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCS1	YMR038C	STB2	P46679	850 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	PMT4	P46971	762 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	INN1	P53901	409 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	GOT1	Q03554	138 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	TAF12	Q03761	539 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	ROY1	Q04847	553 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	YMR034C	Q05131	434 aa	Predicted RBP	4.39	□□□□□ -1.71
CCS1	YMR038C	ADE13	Q05911	482 aa	Known RBP	4.39	□□□□□ -1.71
CCS1	YMR038C	ATG23	Q06671	453 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	ENT4	Q07872	247 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	YPL191C	Q08930	360 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	COX17	Q12287	69 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	RGT2	Q12300	763 aa		4.39	□□□□□ -1.71
CCS1	YMR038C	SSA3	P09435	649 aa	Known RBP	4.38	□□□□□ -1.71
CCS1	YMR038C	SEC14	P24280	304 aa	Known RBP	4.38	□□□□□ -1.71
CCS1	YMR038C	YCL049C	P25577	312 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	SIP1	P32578	815 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	PTM1	P32857	523 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	YIL152W	P40455	235 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	XBP1	P40489	647 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	YJR149W	P47177	404 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	BOL2	P53082	120 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	CLD1	P53264	445 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	RSC9	Q03124	581 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	GTB1	Q04924	702 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	ORM2	Q06144	216 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	MMT2	Q08970	484 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	ATG29	Q12092	213 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	LYS21	Q12122	440 aa	Known RBP	4.38	□□□□□ -1.71
CCS1	YMR038C	YMR030W-A	Q3E760	96 aa		4.38	□□□□□ -1.71
CCS1	YMR038C	SLH1	P53327	1967 aa	Known RBP	4.38	□□□□□ -1.71
CCS1	YMR038C	PHO2	P07269	559 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	SPO16	P17122	198 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	GSH1	P32477	678 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	HES1	P35843	434 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	RPS27A	P35997	82 aa	Known RBP	4.37	□□□□□ -1.71
CCS1	YMR038C	RRN10	P38204	145 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	RPS27B	P38711	82 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	GGC1	P38988	300 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	NPT1	P39683	429 aa	Known RBP	4.37	□□□□□ -1.71
CCS1	YMR038C	YNL320W	P42840	284 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	OCA1	P50946	238 aa	Predicted RBP	4.37	□□□□□ -1.71
CCS1	YMR038C	BUD32	P53323	261 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	YPL071C	Q02864	156 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	TPO3	Q06451	622 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	NOP6	Q07623	225 aa	Known RBP	4.37	□□□□□ -1.71
CCS1	YMR038C	YOL159C	Q08300	171 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	YLR049C	Q12110	428 aa		4.37	□□□□□ -1.71
CCS1	YMR038C	TRX2	P22803	104 aa	Known RBP	4.36	□□□□□ -1.71
CCS1	YMR038C	URE2	P23202	354 aa	Known RBP	4.36	□□□□□ -1.71
CCS1	YMR038C	ADE1	P27616	306 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	LAC1	P28496	418 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	FAA1	P30624	700 aa	Known RBP	4.36	□□□□□ -1.71
CCS1	YMR038C	GCG1	P32656	232 aa	Known RBP	4.36	□□□□□ -1.71
CCS1	YMR038C	NUP120	P35729	1037 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	KKQ8	P36004	724 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	TDA11	P38854	504 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	NDE1	P40215	560 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	CIN1	P40987	1014 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	MDM34	P53083	459 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	YGR250C	P53316	781 aa	Known RBP	4.36	□□□□□ -1.71
CCS1	YMR038C	NUP116	Q02630	1113 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	VTI1	Q04338	217 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	BCH1	Q05029	724 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	VAM6	Q07468	1049 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	BAG7	Q12128	409 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	YPR011C	Q12251	326 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	SRN2	Q99176	213 aa		4.36	□□□□□ -1.71
CCS1	YMR038C	STE3	P06783	470 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	YML003W	P0CF16	290 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	YMR085W	P0CF18	432 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	GPA2	P10823	449 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	HEM15	P16622	393 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	EXO84	P38261	753 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	IFA38	P38286	347 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	SPC97	P38863	823 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	YEL057C	P39983	233 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	MEP1	P40260	492 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	MNT3	P40549	630 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	VMA13	P41807	478 aa	Known RBP	4.35	□□□□□ -1.71
CCS1	YMR038C	HOC1	P47124	396 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	LCL3	P53153	274 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	BSC5	P53755	489 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	YNL058C	P53947	316 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	IDP3	P53982	420 aa	Known RBP	4.35	□□□□□ -1.71
CCS1	YMR038C	PRP38	Q00723	242 aa	Predicted RBP	4.35	□□□□□ -1.71
CCS1	YMR038C	YSA1	Q01976	231 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	RNY1	Q02933	434 aa	Known RBP	4.35	□□□□□ -1.71
CCS1	YMR038C	CSN9	Q03981	162 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	BUD22	Q04347	519 aa	Known RBP	4.35	□□□□□ -1.71
CCS1	YMR038C	YMR027W	Q04371	470 aa		4.35	□□□□□ -1.71
CCS1	YMR038C	BRR1	Q99177	341 aa	Predicted RBP	4.35	□□□□□ -1.71
CCS1	YMR038C	ILV2	P07342	687 aa	Known RBP	4.34	□□□□□ -1.71
CCS1	YMR038C	PEP5	P12868	1029 aa		4.34	□□□□□ -1.71
CCS1	YMR038C	GUK1	P15454	187 aa	Known RBP	4.34	□□□□□ -1.71
CCS1	YMR038C	MGR1	P25573	417 aa		4.34	□□□□□ -1.71
CCS1	YMR038C	PTC6	P25646	442 aa		4.34	□□□□□ -1.71
CCS1	YMR038C	ZIP1	P31111	875 aa		4.34	□□□□□ -1.71
CCS1	YMR038C	ERG1	P32476	496 aa	Known RBP	4.34	□□□□□ -1.71
CCS1	YMR038C	NFU1	P32860	256 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms