RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W LAC1P28496 418 aa2.17□□□□□ -2.06
NUP100YKL068W RGT1P32862 1170 aa2.17□□□□□ -2.06
NUP100YKL068W LDB7P38210 180 aa2.17□□□□□ -2.06
NUP100YKL068W PCL6P40038 420 aa2.17□□□□□ -2.06
NUP100YKL068W SAD1P43589 448 aa2.17□□□□□ -2.06
NUP100YKL068W YGR067CP53243 804 aa2.17□□□□□ -2.06
NUP100YKL068W NOP13P53883 403 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
NUP100YKL068W SPP2Q02521 185 aa2.17□□□□□ -2.06
NUP100YKL068W YDR132CQ03900 495 aa2.17□□□□□ -2.06
NUP100YKL068W RRP17Q04031 235 aaPredicted RBP2.17□□□□□ -2.06
NUP100YKL068W BUR2Q05949 395 aa2.17□□□□□ -2.06
NUP100YKL068W CMS1Q07897 291 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W BAG7Q12128 409 aa2.17□□□□□ -2.06
NUP100YKL068W YRA1Q12159 226 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W TRM13Q12383 476 aa2.17□□□□□ -2.06
NUP100YKL068W PRP46Q12417 451 aaPredicted RBP2.17□□□□□ -2.06
NUP100YKL068W LAS17Q12446 633 aa2.17□□□□□ -2.06
NUP100YKL068W UBA3Q99344 299 aa2.17□□□□□ -2.06
NUP100YKL068W CHS1P08004 1131 aa2.17□□□□□ -2.06
NUP100YKL068W RPS16AP0CX51 143 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W RPS16BP0CX52 143 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W NHP6BP11633 99 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W CBF1P17106 351 aa2.17□□□□□ -2.06
NUP100YKL068W PBN1P25580 416 aa2.17□□□□□ -2.06
NUP100YKL068W ZIP1P31111 875 aa2.17□□□□□ -2.06
NUP100YKL068W SKG6P32900 734 aaPredicted RBP2.17□□□□□ -2.06
NUP100YKL068W SOR1P35497 357 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W BIG1P38813 335 aa2.17□□□□□ -2.06
NUP100YKL068W SBE22P38814 852 aa2.17□□□□□ -2.06
NUP100YKL068W PCF11P39081 626 aaPredicted RBP2.17□□□□□ -2.06
NUP100YKL068W SNG1P46950 547 aa2.17□□□□□ -2.06
NUP100YKL068W STB4P50104 949 aa2.17□□□□□ -2.06
NUP100YKL068W CUS2P53830 285 aaPredicted RBP2.17□□□□□ -2.06
NUP100YKL068W IST1P53843 298 aaPredicted RBP2.17□□□□□ -2.06
NUP100YKL068W YNL092WP53934 400 aa2.17□□□□□ -2.06
NUP100YKL068W MRP51Q02950 344 aa2.17□□□□□ -2.06
NUP100YKL068W YMR178WQ03219 274 aaKnown RBP2.17□□□□□ -2.06
NUP100YKL068W RTT103Q05543 409 aa2.17□□□□□ -2.06
NUP100YKL068W GRS2Q06817 618 aa2.17□□□□□ -2.06
NUP100YKL068W SYO1Q07395 620 aa2.17□□□□□ -2.06
NUP100YKL068W SOR2Q07786 357 aa2.17□□□□□ -2.06
NUP100YKL068W THI72Q08579 599 aa2.17□□□□□ -2.06
NUP100YKL068W MCA1Q08601 432 aa2.17□□□□□ -2.06
NUP100YKL068W RPS10AQ08745 105 aaPredicted RBP2.17□□□□□ -2.06
NUP100YKL068W RAX1Q08760 435 aa2.17□□□□□ -2.06
NUP100YKL068W YDR262WQ12331 272 aa2.17□□□□□ -2.06
NUP100YKL068W NPC2Q12408 173 aa2.17□□□□□ -2.06
NUP100YKL068W YPR1Q12458 312 aa2.17□□□□□ -2.06
NUP100YKL068W ADE4P04046 510 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W OPI3P05375 206 aa2.16□□□□□ -2.06
NUP100YKL068W GPH1P06738 902 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W ZRC1P20107 442 aa2.16□□□□□ -2.06
NUP100YKL068W SIN4P32259 974 aa2.16□□□□□ -2.06
NUP100YKL068W RPF2P36160 344 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W RRN10P38204 145 aa2.16□□□□□ -2.06
NUP100YKL068W TSC10P38342 320 aa2.16□□□□□ -2.06
NUP100YKL068W CIN4P39110 191 aa2.16□□□□□ -2.06
NUP100YKL068W ICP55P40051 511 aa2.16□□□□□ -2.06
NUP100YKL068W RFC4P40339 323 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W BAP3P41815 604 aa2.16□□□□□ -2.06
NUP100YKL068W SPG5P42933 373 aa2.16□□□□□ -2.06
NUP100YKL068W RPS10BP46784 105 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W LIF1P53150 421 aa2.16□□□□□ -2.06
NUP100YKL068W SLG1P54867 378 aa2.16□□□□□ -2.06
NUP100YKL068W RSM23Q01163 450 aa2.16□□□□□ -2.06
NUP100YKL068W YMR087WQ04299 284 aa2.16□□□□□ -2.06
NUP100YKL068W COQ11Q05892 277 aa2.16□□□□□ -2.06
NUP100YKL068W PAM18Q07914 168 aa2.16□□□□□ -2.06
NUP100YKL068W YLR040CQ07988 224 aa2.16□□□□□ -2.06
NUP100YKL068W TRM11Q12463 433 aa2.16□□□□□ -2.06
NUP100YKL068W YPT1P01123 206 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W HIS5P07172 385 aa2.16□□□□□ -2.06
NUP100YKL068W CDC33P07260 213 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W MET3P08536 511 aa2.16□□□□□ -2.06
NUP100YKL068W MET16P18408 261 aaPredicted RBP2.16□□□□□ -2.06
NUP100YKL068W ATP10P18496 279 aa2.16□□□□□ -2.06
NUP100YKL068W DBR1P24309 405 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W FUB1P25659 250 aa2.16□□□□□ -2.06
NUP100YKL068W GDA1P32621 518 aa2.16□□□□□ -2.06
NUP100YKL068W TSA1P34760 196 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W COS9P36034 407 aa2.16□□□□□ -2.06
NUP100YKL068W CBT1P36038 271 aaPredicted RBP2.16□□□□□ -2.06
NUP100YKL068W OLA1P38219 394 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W RTT107P38850 1070 aa2.16□□□□□ -2.06
NUP100YKL068W CDC40P40968 455 aaPredicted RBP2.16□□□□□ -2.06
NUP100YKL068W STE24P47154 453 aa2.16□□□□□ -2.06
NUP100YKL068W YIP4P53093 235 aa2.16□□□□□ -2.06
NUP100YKL068W ZPR1P53303 486 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W DIP5P53388 608 aa2.16□□□□□ -2.06
NUP100YKL068W BUD17P53727 317 aa2.16□□□□□ -2.06
NUP100YKL068W SHR3Q02774 210 aa2.16□□□□□ -2.06
NUP100YKL068W TRS23Q03784 219 aa2.16□□□□□ -2.06
NUP100YKL068W AIM33Q04516 312 aa2.16□□□□□ -2.06
NUP100YKL068W AIM45Q12480 344 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W MEX67Q99257 599 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W Q0010Q9ZZX9 128 aa2.16□□□□□ -2.06
NUP100YKL068W ECM29P38737 1868 aa2.16□□□□□ -2.06
NUP100YKL068W ADH2P00331 348 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W TRP3P00937 484 aa2.16□□□□□ -2.06
NUP100YKL068W RHO2P06781 192 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms